Publications

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1996
Johnson A.F, Wang R.F, Ji H.M, Chen D.H, Guilfoyle R.A, Smith L.M.  1996.  Purification of single-stranded M13 DNA by cooperative triple-helix-mediated affinity capture. Analytical Biochemistry. 234:83-95.
Ji H.M, Francisco T., Smith L.M, Guilfoyle R.A.  1996.  Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture. Genomics. 31:185-192.
Mouradian S., Nelson C.M, Smith L.M.  1996.  A self-assembled matrix monolayer for UV-MALDI mass spectrometry. Journal of the American Chemical Society. 118:8639-8645.
Smith L.M.  1996.  Sequence from spectrometry: a realistic prospect? Nature Biotechnology. 14:1084,1087.
1997
Ono T., Scalf M., Smith L.M.  1997.  2'-fluoro modified nucleic acids: polymerase-directed synthesis, properties and stability to analysis by matrix-assisted laser desorption/ionization mass spectrometry. Nucleic Acids Research. 25:4581-4588.
Tang W, Zhu L, Smith L.M.  1997.  Controlling DNA Fragmentation in MALDI-MS by Chemical Modification. Analytical Chemistry. 69:302-312.
Frutos A.G, Liu Q.H, Thiel A.J, Sanner A.MW, Condon A.E, Smith L.M, Corn R.M.  1997.  Demonstration of a word design strategy for DNA computing on surfaces. Nucleic Acids Research. 25:4748-4757.
Mouradian S., Skogen J.W, Dorman F.D, Zarrin F., Kaufman S.L, Smith L.M.  1997.  DNA analysis using an electrospray scanning mobility particle sizer. Analytical Chemistry. 69:919-925.
Guo Z., Liu Q.H, Smith L.M.  1997.  Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization. Nature Biotechnology. 15:331-335.
Tang W, Krause J, Zhu L, Smith L.M.  1997.  Factors influencing oligonucleotide stability in matrix-assisted laser desorption/ionization (MALDI) mass spectroscopy. International Journal of Mass Spectrometry and Ion Processes. 169/170:301-311.
Griffin T.J, Tang W., Smith L.M.  1997.  Genetic analysis by peptide nucleic acid affinity MALDI-TOF mass spectrometry. Nature Biotechnology. 15:1368-1372.
Thiel A.J, Frutos A.G, Jordan C.E, Corn R.M, Smith L.M.  1997.  In situ surface plasmon resonance imaging detection of DNA hybridization to oligonucleotide arrays on gold surfaces. Analytical Chemistry. 69:4948-4956.
Guilfoyle RA, Leeck CL, K. Kroening D, Smith L.M, Guo Z.  1997.  Ligation-mediated PCR amplification of specific fragments from a Class-II restriction endonuclease. Nucleic Acids Research. 25:1854-1858.
Tang W, Nelson CM, Zhu L, Smith L.M.  1997.  Positive ion formation in the ultraviolet matrix- assisted laser desorption/ionization analysis of oligonucleotides by using 2,5-dihydroxybenzoic acid. Journal of the American Society for Mass Spectrometry. 8:218-224.
1998
Griffin T.J, Smith L.M.  1998.  An approach to predicting the stabilities of peptide nucleic acid : DNA duplexes. Analytical Biochemistry. 260:56-63.
Liu Q.H, Frutos A.G, Thiel A.J, Corn R.M, Smith L.M.  1998.  DNA computing on surfaces: Encoding information at the single base level. Journal of Computational Biology. 5:269-278.
Frutos A.G, Smith L.M, Corn R.M.  1998.  Enzymatic ligation reactions of DNA "words" on surfaces for DNA computing. Journal of the American Chemical Society. 120:10277-10282.
Fei Z.D, Ono T., Smith L.M.  1998.  MALDI-TOF mass spectrometric typing of single nucleotide polymorphisms with mass-tagged ddNTPs. Nucleic Acids Research. 26:2827-2828.
Giddings M.C, Severin J., Westphall M., Wu J.Z, Smith L.M.  1998.  A software system for data analysis in automated DNA sequencing. Genome Research. 8:644-665.
Smith L.M, Corn R.M, Condon A.E, Lagally M.G, Frutos A.G, Liu Q.H, Thiel A.J.  1998.  A surface-based approach to DNA computation. Journal of Computational Biology. 5:255-267.
Gilliland G.D, Petrovic M.S, Hjalmarson H.P, Wolford D.J, Northrop G.A, Kuech T.F, Smith L.M, Bradley J.A.  1998.  Time-dependent heterointerfacial band bending and quasi-two-dimensionl excitonic transport in GaAs structures. Physical Review B. 58:4728-4732.
1999
Scalf M., Westphall M.S, Krause J., Kaufman S.L, Smith L.M.  1999.  Controlling charge states of large ions. Science. 283:194-197.
Griffin TJ, Hall JG, Prudent JR, Smith L.M.  1999.  Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 96:6301-6306.
Krause J, Scalf M, Smith L.M.  1999.  High resolution characterization of DNA fragment ions produced by ultraviolet matrix-assisted laser desorption/ionization using linear and reflecting time-of-flight mass spectrometry. Journal of the American Society for Mass Spectrometry. 10:423-429.
Griffin TJ, Tang W, Smith L.M.  1999.  MALDI-TOF mass spectrometric detection of PNA hybrids for genetic analysis. :143-154.

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