FlashLFQ: An ultrafast label-free quantification algorithm for mass-spectrometry proteomics.
MetaMorpheus: Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities.
mzLib: A library for mass spectrometry projects.
Proteoform Suite: Software for constructing, quantifying, and visualizing proteoform families.
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Check out our YouTube page for various walkthroughs: LMS Research Group