Publications
Export 44 results:
Author Title Type [ Year] Filters: First Letter Of Last Name is R [Clear All Filters]
A Hybrid Spectral Library and Protein Sequence Database Search Strategy for Bottom-Up and Top-Down Proteomic Data Analysis. Journal of Proteome Research. 21:2609-2618.
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2022. MetaNetwork Enhances Biological Insights from Quantitative Proteomics Differences by Combining Clustering and Enrichment Analyses. Journal of Proteome Research. 21:410-419.
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2022. An atlas of protein turnover rates in mouse tissues. Nature Communications. 12
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2021. Automated Assignment of Proteoform Classification Levels. Journal of Proteome Research. 20:4101-4105.
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2021. Binary Classifier for Computing Posterior Error Probabilities in MetaMorpheus. Journal of Proteome Research. 20:1997-2004.
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2021. Internal Fragment Ions Disambiguate and Increase Identifications in Top-Down Proteomics. Journal of Proteome Research. 20:5412-5418.
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2021. An Algorithm to Improve the Speed of Semi and Non-specific Enzyme Searches in Proteomics. Current Bioinformatics. 15:1065-1074.
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2020. O-Pair Search with MetaMorpheus for O-glycopeptide characterization. Nature Methods. 17:1133-+.
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2020. Best practices and benchmarks for intact protein analysis for top-down mass spectrometry. Nature methods. 16(7)
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2019. Differentiated fibrocytes assume a functional mesenchymal phenotype with regenerative potential. Science advances. 5(5)
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2019. A five-level classification system for proteoform identifications. Nature methods. 16(10)
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2019. Global Identification of Post-Translationally Spliced Peptides with Neo-Fusion. Journal of Proteome Research. 18:349-358.
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2019. Adaptation of Hybridization Capture of Chromatin-associated Proteins for Proteomics to Mammalian Cells. Journal of Visualized Experiments. (136)
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2018. Global Identification of Post-Translationally Spliced Peptides with Neo-Fusion. Journal of Proteome Research. 18(1):349-358.
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2018. How many human proteoforms are there? Nature Chemical Biology. 14:206-214.
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2018. Identification and quantification of murine mitochondrial proteoforms using an integrated top-down and intact-mass strategy. Journal of Proteome Research. 17(10):3526-3536.
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2018. Identification of MS-Cleavable and Noncleavable Chemically Cross-Linked Peptides with MetaMorpheus. Journal of Proteome Research. 17(7):2370-2376.
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2018. Mutation-dependent aggregation and toxicity in a Drosophila model for UBQLN2-associated ALS. Human Molecular Genetics. 27:322-337.
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2018. HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae. Genomics. 107:267-273.
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2016. Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics. Analytical Chemistry. 86:2314-2319.
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2014. Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics. Analytical Chemistry. 86:2314-2319.
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2014. Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics. Analytical Chemistry. 86:2314-2319.
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