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A

Guillen-Ahlers H, Rao P.K, Perumalla D.S, Montoya M.J, Jadhav A.YL, Shortreed M.R, Smith L.M, Olivier M. 2018. Adaptation of Hybridization Capture of Chromatin-associated Proteins for Proteomics to Mammalian Cells. Journal of Visualized Experiments. (136)

Rolfs Z., Millikin R.J, Smith L.M. 2020. An Algorithm to Improve the Speed of Semi and Non-specific Enzyme Searches in Proteomics. Current Bioinformatics. 15:1065-1074.

Mouradian S., Rank D.R, Smith L.M. 1996. Analyzing sequencing reactions from bacteriophage M13 by matrix-assisted laser desorption/ionization mass spectrometry. Rapid Communications in Mass Spectrometry. 10:1475-1478.

Smith L.M, J. Parce W, Smith BA, McConnell HM. 1979. Antibodies bound to lipid haptens in model membranes diffuse as rapidly as the lipids themselves. Proceedings of the National Academy of Sciences of the United States of America. 76:4177-9.

Connell C., Fung S., Heiner C., Bridgham J., Chakerian V., Heron E., Jones B., Menchen S., Mordan W., Raff M. et al.. 1987. Automated DNA-Sequence Analysis. BioTechniques. 5:342-&.

Connell C., Fung S., Heiner C., Bridgham J., Chakerian V., Heron E., Jones B., Menchen S., Mordan W., Raff M. et al.. 1987. Automated DNA-Sequence Analysis. BioTechniques. 5:342-&.

B

Millikin R.J, Shortreed M.R, Scalf M., Smith L.M. 2020. A Bayesian Null Interval Hypothesis Test Controls False Discovery Rates and Improves Sensitivity in Label-Free Quantitative Proteomics. Journal of Proteome Research. 19:1975-1981.

Shortreed M.R, Millikin R.J, Liu L., Rolfs Z., Miller R.M, Schaffer L.V, Frey B.L, Smith L.M. 2021. Binary Classifier for Computing Posterior Error Probabilities in MetaMorpheus. Journal of Proteome Research. 20:1997-2004.

Shortreed M.R, Millikin R.J, Liu L., Rolfs Z., Miller R.M, Schaffer L.V, Frey B.L, Smith L.M. 2021. Binary Classifier for Computing Posterior Error Probabilities in MetaMorpheus. Journal of Proteome Research. 20:1997-2004.

Mead DA, McClary J.A, Luckey J.A, Kostichka A.J, Witney F.R, Smith L.M. 1991. Bst DNA polymerase permits rapid sequence analysis from nanogram amounts of template. BioTechniques. 11:76-8,80,82-4,86-7.

Mead DA, McClary J.A, Luckey J.A, Kostichka A.J, Witney F.R, Smith L.M. 1991. Bst DNA polymerase permits rapid sequence analysis from nanogram amounts of template. BioTechniques. 11:76-8,80,82-4,86-7.

C

Smith L.M, Petty H.R, Parham P., McConnell H.M. 1982. Cell surface properties of HLA antigens on Epstein-Barr virus-transformed cell lines. Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences. 79:608-612.

Moradian A., Scalf M., Westphall M.S, Smith L.M, Douglas D.J. 2002. Collision cross sections of gas phase DNA ions. International Journal of Mass Spectrometry. 219:161-170.

Spiniello M., Steinbrink M.I, Cesnik A.J, Miller R.M, Scalf M., Shortreed M.R, Smith L.M. 2019. Comprehensive in vivo identification of the c-Myc mRNA interactome using HyPR-MS. Cold Spring Harbor Laboratory Press.

Dai Y., Buxton K.E, Schaffer L.V, Miller R.M, Millikin R.J, Scalf M., Frey B.L, Shortreed M.R, Smith L.M. 2019. Constructing Human Proteoform Families Using Intact-Mass and Top-Down Proteomics with a Multi-Protease Global Post-Translational Modification Discovery Database. Journal of Proteome Research. 18(10)

Dai Y., Buxton K.E, Schaffer L.V, Miller R.M, Millikin R.J, Scalf M., Frey B.L, Shortreed M.R, Smith L.M. 2019. Constructing Human Proteoform Families Using Intact-Mass and Top-Down Proteomics with a Multi-Protease Global Post-Translational Modification Discovery Database. Journal of Proteome Research. 18(10)

Schaffer L.V, Anderson L.C, Butcher D.S, Shortreed M.R, Miller R.M, Pavelec C., Smith L.M. 2021. Construction of Human Proteoform Families from 21 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Top-Down Proteomic Data. Journal of Proteome Research. 20:317-325.

Sun B, Colavita PE, Kim H, Lockett M, Marcus MS, Smith L.M, Hamers R.J. 2006. Covalent Photochemical Functionalization of Amorphous Carbon Thin Films for Integrated Real-Time Biosensing. Langmuir. 22:9598-9605.

D

Miller R.M, Knoener R.A, Benner B.E, Frey B.L, Scalf M., Shortreed M.R, Sherer N.M, Smith L.M. 2022. Discovery of Dehydroamino Acid Residues in the Capsid and Matrix Structural Proteins of HIV-1 br. Journal of Proteome Research. 21:993-1001.

Mouradian S., Skogen J.W, Dorman F.D, Zarrin F., Kaufman S.L, Smith L.M. 1997. DNA analysis using an electrospray scanning mobility particle sizer. Analytical Chemistry. 69:919-925.

E

Mehdi S.Q, Recktenwald D.J, Smith L.M, Li G.C, Armour E.P, Hahn G.M. 1984. Effect of hyperthermia on murine cell surface histocompatibility antigens. Cancer Research. 44:3394-3397.

Murray J.K, Farooqi B., Sadowsky J.D, Scalf M., Freund W.A, Smith L.M, Chen J.D, Gellman S.H. 2005. Efficient synthesis of a beta-peptide combinatorial library with microwave irradiation. Journal of the American Chemical Society. 127:13271-13280.

Miller R.M, Jordan B., Mehlferber M.M, Jeffery E.D, Chatzipantsiou C., Kaur S., Millikin R.J, Dai Y.X, Tiberi S., Castaldi P.J et al.. 2022. Enhanced protein isoform characterization through long-read proteogenomics. Genome Biology. 23

Miller R.M, Jordan B., Mehlferber M.M, Jeffery E.D, Chatzipantsiou C., Kaur S., Millikin R.J, Dai Y.X, Tiberi S., Castaldi P.J et al.. 2022. Enhanced protein isoform characterization through long-read proteogenomics. Genome Biology. 23

Miller R.M, Jordan B., Mehlferber M.M, Jeffery E.D, Chatzipantsiou C., Kaur S., Millikin R.J, Dai Y.X, Tiberi S., Castaldi P.J et al.. 2022. Enhanced protein isoform characterization through long-read proteogenomics. Genome Biology. 23

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