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Nie B., Shortreed M.R, Smith L.M. 2006. Quantitative detection of individual cleaved DNA molecules on surfaces using gold nanoparticles and scanning electron microscope imaging. Analytical Chemistry. 78:1528-1534.

Pellitteri-Hahn M.C, Halligan B.D, Scalf M., Smith L.M, Hickey W.J. 2011. Quantitative proteomic analysis of the chemolithoautotrophic bacterium Nitrosomonas europaea: Comparison of growing- and energy-starved cells. Journal of Proteomics. 74:411-419.

Miller M.J, Scalf M., Rytz T.C, Hubler S.L, Smith L.M, Vierstra R.D. 2013. Quantitative Proteomics Reveals Factors Regulating RNA Biology as Dynamic Targets of Stress-induced SUMOylation in Arabidopsis. Molecular & Cellular Proteomics. 12:449-463.

R

Mandir JB, Lockett MR, Phillips MF, Allawi HT, Lyamichev VI, Smith L.M. 2009. Rapid Determination of RNA Accessible Sites by Surface Plasmon Resonance Detection of Hybridization to DNA Arrays. Analytical Chemistry. 81:8949-8956.

Brumley R.L, Smith L.M. 1991. Rapid DNA sequencing by horizontal ultrathin gel electrophoresis. Nucleic Acids Research. 19:4121-4126.

Ji H, Smith L.M, Guilfoyle RA. 1994. Rapid isolation of cosmid insert DNA by triple-helix-mediated affinity capture. Genetic Analysis, Techniques and Applications. 11:43-7.

Ji H, Smith L.M. 1993. Rapid purification of double-stranded DNA by triple-helix-mediated affinity capture. Analytical Chemistry. 65:1323-8.

Ji H.M, Francisco T., Smith L.M, Guilfoyle R.A. 1996. Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture. Genomics. 31:185-192.

Fitzgerald M.C, Skowron P., Vanetten J.L, Smith L.M, Mead D.A. 1992. Rapid shotgun cloning utilizing the two base recognition endonuclease CviJI. Nucleic Acids Research. 20:3753-3762.

Lamos SM, Shortreed MR, Frey BL, Belshaw PJ, Smith L.M. 2007. Relative quantification of carboxylic acid metabolites by liquid chromatography - Mass spectrometry using isotopic variants of cholamine. Analytical Chemistry. 79:5143-5149.

Freed JK, Shortreed MR, Kleefisch CJ, Smith L.M, Greene AS. 2008. Revealing the role of phosphatidylserine in shear stress-mediated protection in endothelial cells. Endothelium-Journal of Endothelial Cell Research. 15:225-230.

Wu C.H, Lockett M.R, Smith L.M. 2012. RNA-Mediated Gene Assembly from DNA Arrays. Angewandte Chemie-International Edition. 51:4628-4632.

S

Nie B., Shortreed M.R, Smith L.M. 2005. Scoring single-nucleotide polymorphisms at the single-molecule level by counting individual DNA cleavage events on surfaces. Analytical Chemistry. 77:6594-6600.

Levenstein M.E, Berggren W.T, Lee J.E, Conard K.R, Llanas R.A, Wagner R.J, Smith L.M, Thomson J.A. 2008. Secreted Proteoglycans Directly Mediate Human Embryonic Stem Cell-Basic Fibroblast Growth Factor 2 Interactions Critical for Proliferation. Stem Cells. 26:3099-3107.

Mouradian S., Nelson C.M, Smith L.M. 1996. A self-assembled matrix monolayer for UV-MALDI mass spectrometry. Journal of the American Chemical Society. 118:8639-8645.

Mouradian S., Brumley R.L, Smith L.M. 1994. Separating field strength, temperature, and pulsing effects in pulsed field electrophoresis. Electrophoresis. 15:1084-1090.

Smith L.M. 1996. Sequence from spectrometry: a realistic prospect? Nature Biotechnology. 14:1084,1087.

Wu C.H, Chen S.Y, Shortreed M.R, Kreitinger G.M, Yuan Y., Frey B.L, Zhang Y., Mirza S., Cirillo L.A, Olivier M. et al.. 2011. Sequence-Specific Capture of Protein-DNA Complexes for Mass Spectrometric Protein Identification. Plos One. 6

Chen D.H, Peterson M.D, Brumley R.L, Giddings M.C, Buxton E.C, Westphall M., Smith L.M. 1995. Side Excitation of Fluorescence in Ultrathin Slab Gel Electrophoresis. Analytical Chemistry. 67:3405-3411.

Jorabchi K., Smith L.M. 2009. Single Droplet Separations and Surface Partition Coefficient Measurements Using Laser Ablation Mass Spectrometry. Analytical Chemistry. 81:9682-9688.

Griffin T.J, Smith L.M. 2000. Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry. Trends in Biotechnology. 18:77-84.

Berggren W.T, Westphall M.S, Smith L.M. 2002. Single-pulse nanoelectrospray ionization. Analytical Chemistry. 74:3443-3448.

Hallows WC, Yu W, Smith BC, Devires MK, Ellinger JJ, Someya S, Shortreed MR, Prolla T, Markley JL, Smith L.M et al.. 2011. Sirt3 Promotes the Urea Cycle and Fatty Acid Oxidation during Dietary Restriction. Molecular Cell. 41:139-149.

Chen X., Smith L.M, Bradbury E.M. 2000. Site-specific mass tagging with stable isotopes in proteins for accurate and efficient protein identification. Analytical Chemistry. 72:1134-1143.

Giddings M.C, Severin J., Westphall M., Wu J.Z, Smith L.M. 1998. A software system for data analysis in automated DNA sequencing. Genome Research. 8:644-665.

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