Publications

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Author Title [ Type(Desc)] Year
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Journal Article
Nie B., Shortreed M.R, Smith L.M.  2006.  Quantitative detection of individual cleaved DNA molecules on surfaces using gold nanoparticles and scanning electron microscope imaging. Analytical Chemistry. 78:1528-1534.
Nie B., Shortreed M.R, Smith L.M.  2005.  Scoring single-nucleotide polymorphisms at the single-molecule level by counting individual DNA cleavage events on surfaces. Analytical Chemistry. 77:6594-6600.
Wu C.H, Chen S.Y, Shortreed M.R, Kreitinger G.M, Yuan Y., Frey B.L, Zhang Y., Mirza S., Cirillo L.A, Olivier M. et al..  2011.  Sequence-Specific Capture of Protein-DNA Complexes for Mass Spectrometric Protein Identification. Plos One. 6
Peelen D., Kodoyianni V., Lee J., Zheng T., Shortreed M.R, Smith L.M.  2006.  Specific capture of mammalian cells by cell surface receptor binding to ligand immobilized on gold thin films. Journal of Proteome Research. 5:1580-1585.
Lu M.C, Hall J.G, Shortreed M.R, Wang L.M, Berggren W.T, Stevens P.W, Kelso D.M, Lyamichev V., Neri B., Skinner J.L et al..  2002.  Structure-specific DNA cleavage on surfaces. Journal of the American Chemical Society. 124:7924-7931.
Chen Y., Shortreed M.R, Peelen D., Lu M.C, Smith L.M.  2004.  Surface amplification of invasive cleavage products. Journal of the American Chemical Society. 126:3016-3017.
Lu M.C, Shortreed M.R, Hall J.G, Wang L.M, Berggren T., Stevens P.W, Kelso D.M, Lyamichev V., Neri B., Smith L.M.  2002.  A surface invasive cleavage assay for highly parallel SNP analysis. Human Mutation. 19:416-422.
Shortreed M.R, Chang S.B, Hong D.G, Phillips M., Campion B., Tulpan D.C, Andronescu M., Condon A., Hoos H.H, Smith L.M.  2005.  A thermodynamic approach to designing structure-free combinatorial DNA word sets. Nucleic Acids Research. 33:4965-4977.
Tulpan D., Andronescu M., Chang S.B, Shortreed M.R, Condon A., Hoos H.H, Smith L.M.  2005.  Thermodynamically based DNA strand design. Nucleic Acids Research. 33:4951-4964.
Millikin R.J, Solntsev S.K, Shortreed M.R, Smith L.M.  2018.  Ultrafast Peptide Label-Free Quantification with FlashLFQ. Journal of Proteome Research. 17:386-391.

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