Publications

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Journal Article
Gemperline D.C, Scalf M., Smith L.M, Vierstra R.D.  2016.  Morpheus Spectral Counter: A computational tool for label-free quantitative mass spectrometry using the Morpheus search engine. Proteomics. 16:920-924.
Wang L.M, Liu Q.H, Corn R.M, Condon A.E, Smith L.M.  2000.  Multiple word DNA computing on surfaces. Journal of the American Chemical Society. 122:7435-7440.
Torde R.G, Therrien A.J, Shortreed M.R, Smith L.M, Lamos S.M.  2013.  Multiplexed Analysis of Cage and Cage Free Chicken Egg Fatty Acids Using Stable Isotope Labeling and Mass Spectrometry. Molecules. 18:14977-14988.
Berggren W.T, Takova T., Olson M.C, Eis P.S, Kwiatkowski R.W, Smith L.M.  2002.  Multiplexed gene expression analysis using the invader RNA assay with MALDI-TOF mass spectrometry detection. Analytical Chemistry. 74:1745-1750.
Kennedy-Darling J., Holden M.T, Shortreed M.R, Smith L.M.  2014.  Multiplexed Programmable Release of Captured DNA. Chembiochem. 15:2353-2356.
Dai Y, Kennedy-Darling J, Shortreed MR, Scalf M, Gasch AP, Smith L.M.  2017.  Multiplexed Sequence-Specific Capture of Chromatin and Mass Spectrometric Discovery of Associated Proteins. Analytical Chemistry. 89:7841-7846.
Brow M.AD, Oldenburg M.C, Lyamichev V., Heisler L.M, Grotelueschen J., Lyamicheva N., Kozyavkin S., Fors L., Dahlberg J., Smith L.M et al..  1996.  Mutation detection by cleavase fragment length polymorphism. Focus. 18:2-5.
Kim S.H, Stiles S.G, Feichtmeier J.M, Ramesh N., Zhan L.H, Scalf M.A, Smith L.M, Pandey U.B, Tibbetts R.S.  2018.  Mutation-dependent aggregation and toxicity in a Drosophila model for UBQLN2-associated ALS. Human Molecular Genetics. 27:322-337.
Smith L.M.  2006.  Nanostructures - The manifold faces of DNA. Nature. 440:283-284.
Smith L.M.  2010.  Nanotechnology: Molecular robots on the move. Nature. 465:167-168.
Rhoads T.W, Rose C.M, Bailey D.J, Riley N.M, Molden R.C, Nestler A.J, Merrill A.E, Smith L.M, Hebert A.S, Westphall M.S et al..  2014.  Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics. Analytical Chemistry. 86:2314-2319.
Johnson AF, Struthers MD, Pierson KB, Mangel WF, Smith L.M.  1993.  Nonisotopic DNA detection system employing elastase and a fluorogenic rhodamine substrate. Analytical Chemistry. 65:2352-9.
Zhu L., Parr G.R, Fitzgerald M.C, Nelson C.M, Smith L.M.  1995.  Oligodeoxynucleotide Fragmentation in MALDI/TOF Mass Spectrometry Using 355-nm Radiation. Journal of the American Chemical Society. 117:6048-6056.
Lu L., Riley N.M, Shortreed M.R, Bertozzi C.R, Smith L.M.  2020.  O-Pair Search with MetaMorpheus for O-glycopeptide characterization. Nature Methods. 17:1133-+.
Luckey J.A, Smith L.M.  1993.  Optimization of electric field strength for DNA sequencing in capillary gel electrophoresis. Analytical Chemistry. 65:2841-2850.
Luckey JA, Smith L.M.  1993.  Optimization of electric field strength for DNA sequencing in capillary gel electrophoresis. Proceedings of SPIE - The International Society for Optical Engineering. 1891:21-6.
Russell JD, Hilger RT, Ladror DT, Tervo MA, Scalf M, Shortreed MR, Coon J.J, Smith L.M.  2011.  Parallel Detection of Intrinsic Fluorescence from Peptides and Proteins for Quantification during Mass Spectrometric Analysis. Analytical Chemistry. 83:2187-2193.
Holden M.T, Carter M.CD, Ting S.K, Lynn D.M, Smith L.M.  2017.  Parallel DNA Synthesis on Poly(ethylene terephthalate). Chembiochem. 18:1914-1916.
Chen Y., Shortreed M.R, Olivier M., Smith L.M.  2005.  Parallel single nucleotide polymorphism genotyping by surface invasive cleavage with universal detection. Analytical Chemistry. 77:2400-2405.
Smith L.M, McConnell H.M, Smith B.A, Parce J.W.  1981.  Pattern photobleaching of fluorescent lipid vesicles using polarized laser light. Biophysical Journal. 33:139-146.
Sanders JZ, MacKellar SL, Otto BJ, Dodd CT, Heiner C, Hood LE, Smith L.M.  1990.  Peak height variability and accuracy in automated DNA sequencing. Struct. Methods, Proc. Conversation Discip. Biomol. Stereodyn., 6th. 1:89-102.
Strother T., Knickerbocker T., Russell J.N, Butler J.E, Smith L.M, Hamers R.J.  2002.  Photochemical functionalization of diamond films. Langmuir. 18:968-971.
Holden M.T, Carter M.CD, Wu C.H, Wolfer J., Codner E., Sussman M.R, Lynn D.M, Smith L.M.  2015.  Photolithographic Synthesis of High-Density DNA and RNA Arrays on Flexible, Transparent, and Easily Subdivided Plastic Substrates. Analytical Chemistry. 87:11420-11428.
Chen S.Y, Smith L.M.  2009.  Photopatterned Thiol Surfaces for Biomolecule Immobilization. Langmuir. 25:12275-12282.
Tang W, Nelson CM, Zhu L, Smith L.M.  1997.  Positive ion formation in the ultraviolet matrix- assisted laser desorption/ionization analysis of oligonucleotides by using 2,5-dihydroxybenzoic acid. Journal of the American Society for Mass Spectrometry. 8:218-224.

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