Publications

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K
Kostichka AJ, Marchbanks ML, Brumley, Jr. RL, Drossman H, Smith L.M.  1992.  High speed automated DNA sequencing in ultrathin slab gels. Bio/Technology. 10:78-81.
Kolner DE, Guilfoyle RA, Smith L.M.  1994.  A high throughput system for the preparation of single stranded templates grown in microculture. DNA Sequence. 4:253-7.
Kolner DE, Mead DA, Smith L.M.  1992.  Ultrathin DNA sequencing gels using microtrough vertical electrophoresis plates. BioTechniques. 13:338-9.
Knoener R.A, Becker J.T, Scalf M., Sherer N.M, Smith L.M.  2017.  Elucidating the in vivo interactome of HIV-1 RNA by hybridization capture and mass spectrometry. Scientific Reports. 7
Knoener R., Evans E., Becker J.T, Scalf M., Benner B., Sherer N.M, Smith L.M.  2021.  Identification of host proteins differentially associated with HIV-1 RNA splice variants. eLife. 10
Knickerbocker T., Strother T., Schwartz M.P, Russell J.N, Butler J., Smith L.M, Hamers R.J.  2003.  DNA-modified diamond surfaces. Langmuir. 19:1938-1942.
Kim D.Y, Scalf M., Smith L.M, Vierstra R.D.  2013.  Advanced Proteomic Analyses Yield a Deep Catalog of Ubiquitylation Targets in Arabidopsis. Plant Cell. 25:1523-1540.
Kim S.H, Stiles S.G, Feichtmeier J.M, Ramesh N., Zhan L.H, Scalf M.A, Smith L.M, Pandey U.B, Tibbetts R.S.  2018.  Mutation-dependent aggregation and toxicity in a Drosophila model for UBQLN2-associated ALS. Human Molecular Genetics. 27:322-337.
Kim HS, Qin H, Westphall MS, Smith L.M, Blick RH.  2007.  Field emission from a single nanomechanical pillar. Nanotechnology. 18
Kent S., Hood L., Aebersold R., Teplow D., Smith L.M, Farnsworth V., Cartier P., Hines W., Hughes P., Dodd C..  1987.  Approaches to subpicomole protein sequencing. BioTechniques. 5:314-321.
Kennedy-Darling J., Guillen-Ahlers H., Shortreed M.R, Scalf M., Frey B.L, Kendziorski C., Olivier M., Gasch A.P, Smith L.M.  2014.  Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae. Journal of Proteome Research. 13:3810-3825.
Kennedy-Darling J, Smith L.M.  2014.  Measuring the Formaldehyde Protein-DNA Cross-Link Reversal Rate. Analytical Chemistry. 86:5678-5681.
Kennedy-Darling J., Holden M.T, Shortreed M.R, Smith L.M.  2014.  Multiplexed Programmable Release of Captured DNA. Chembiochem. 15:2353-2356.
Keller M.P, Paul P.K, Rabaglia M.E, Stapleton D.S, Schueler K.L, Broman A.T, Ye S.I, Leng N., Brandon C.J, Neto E.C et al..  2016.  The Transcription Factor Nfatc2 Regulates β-Cell Proliferation and Genes Associated with Type 2 Diabetes in Mouse and Human Islets. PLoS Genet. 12(e1006466)
J
Jorabchi K., Westphall M.S, Smith L.M.  2008.  Charge assisted laser desorption/ionization mass spectrometry of droplets. Journal of the American Society for Mass Spectrometry. 19:833-840.
Jorabchi K., Smith L.M.  2009.  Single Droplet Separations and Surface Partition Coefficient Measurements Using Laser Ablation Mass Spectrometry. Analytical Chemistry. 81:9682-9688.
Johnson A.F, Wang R.F, Ji H.M, Chen D.H, Guilfoyle R.A, Smith L.M.  1996.  Purification of single-stranded M13 DNA by cooperative triple-helix-mediated affinity capture. Analytical Biochemistry. 234:83-95.
Johnson AF, Struthers MD, Pierson KB, Mangel WF, Smith L.M.  1993.  Nonisotopic DNA detection system employing elastase and a fluorogenic rhodamine substrate. Analytical Chemistry. 65:2352-9.
Jia W.Y, Kim S.H, Scalf M.A, Tonzi P., Millikin R.J, Guns W.M, Liu L., Mastrocola A.S, Smith L.M, Huang T.T et al..  2021.  Fused in sarcoma regulates DNA replication timing and kinetics. Journal of Biological Chemistry. 297
Ji H, Smith L.M, Guilfoyle RA.  1994.  Rapid isolation of cosmid insert DNA by triple-helix-mediated affinity capture. Genetic Analysis, Techniques and Applications. 11:43-7.
Ji H.M, Francisco T., Smith L.M, Guilfoyle R.A.  1996.  Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture. Genomics. 31:185-192.
Ji H, Smith L.M.  1993.  Rapid purification of double-stranded DNA by triple-helix-mediated affinity capture. Analytical Chemistry. 65:1323-8.
Jarecki JL, Frey BL, Smith L.M, Stretton AO.  2011.  Discovery of Neuropeptides in the Nematode Ascaris suum by Database Mining and Tandem Mass Spectrometry. Journal of Proteome Research. 10:3098-3106.
Jagtap P.D, Johnson J.E, Onsongo G., Sadler F.W, Murray K., Wang Y.B, Shenykrnan G.M, Bandhakavi S., Smith L.M, Griffin T.J.  2014.  Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework. Journal of Proteome Research. 13:5898-5908.

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