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Publications

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Author Title Type [ Year

]

1998

Frutos A.G, Smith L.M, Corn R.M. 1998. Enzymatic ligation reactions of DNA "words" on surfaces for DNA computing. Journal of the American Chemical Society. 120:10277-10282.

Fei Z.D, Ono T., Smith L.M. 1998. MALDI-TOF mass spectrometric typing of single nucleotide polymorphisms with mass-tagged ddNTPs. Nucleic Acids Research. 26:2827-2828.

Giddings M.C, Severin J., Westphall M., Wu J.Z, Smith L.M. 1998. A software system for data analysis in automated DNA sequencing. Genome Research. 8:644-665.

Smith L.M, Corn R.M, Condon A.E, Lagally M.G, Frutos A.G, Liu Q.H, Thiel A.J. 1998. A surface-based approach to DNA computation. Journal of Computational Biology. 5:255-267.

Gilliland G.D, Petrovic M.S, Hjalmarson H.P, Wolford D.J, Northrop G.A, Kuech T.F, Smith L.M, Bradley J.A. 1998. Time-dependent heterointerfacial band bending and quasi-two-dimensionl excitonic transport in GaAs structures. Physical Review B. 58:4728-4732.

1997

Ono T., Scalf M., Smith L.M. 1997. 2'-fluoro modified nucleic acids: polymerase-directed synthesis, properties and stability to analysis by matrix-assisted laser desorption/ionization mass spectrometry. Nucleic Acids Research. 25:4581-4588.

Tang W, Zhu L, Smith L.M. 1997. Controlling DNA Fragmentation in MALDI-MS by Chemical Modification. Analytical Chemistry. 69:302-312.

Frutos A.G, Liu Q.H, Thiel A.J, Sanner A.MW, Condon A.E, Smith L.M, Corn R.M. 1997. Demonstration of a word design strategy for DNA computing on surfaces. Nucleic Acids Research. 25:4748-4757.

Mouradian S., Skogen J.W, Dorman F.D, Zarrin F., Kaufman S.L, Smith L.M. 1997. DNA analysis using an electrospray scanning mobility particle sizer. Analytical Chemistry. 69:919-925.

Guo Z., Liu Q.H, Smith L.M. 1997. Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization. Nature Biotechnology. 15:331-335.

Tang W, Krause J, Zhu L, Smith L.M. 1997. Factors influencing oligonucleotide stability in matrix-assisted laser desorption/ionization (MALDI) mass spectroscopy. International Journal of Mass Spectrometry and Ion Processes. 169/170:301-311.

Griffin T.J, Tang W., Smith L.M. 1997. Genetic analysis by peptide nucleic acid affinity MALDI-TOF mass spectrometry. Nature Biotechnology. 15:1368-1372.

Thiel A.J, Frutos A.G, Jordan C.E, Corn R.M, Smith L.M. 1997. In situ surface plasmon resonance imaging detection of DNA hybridization to oligonucleotide arrays on gold surfaces. Analytical Chemistry. 69:4948-4956.

Guilfoyle RA, Leeck CL, K. Kroening D, Smith L.M, Guo Z. 1997. Ligation-mediated PCR amplification of specific fragments from a Class-II restriction endonuclease. Nucleic Acids Research. 25:1854-1858.

Tang W, Nelson CM, Zhu L, Smith L.M. 1997. Positive ion formation in the ultraviolet matrix- assisted laser desorption/ionization analysis of oligonucleotides by using 2,5-dihydroxybenzoic acid. Journal of the American Society for Mass Spectrometry. 8:218-224.

1996

Mouradian S., Rank D.R, Smith L.M. 1996. Analyzing sequencing reactions from bacteriophage M13 by matrix-assisted laser desorption/ionization mass spectrometry. Rapid Communications in Mass Spectrometry. 10:1475-1478.

Rank D, Smith L.M. 1996. Automated DNA sequencers: the next generation. Optics and Photonics News. 7:29-33.

Yin Z.B, Severin J., Giddings M.C, Huang W.A, Westphall M.S, Smith L.M. 1996. Automatic matrix determination in four dye fluorescence-based DNA sequencing. Electrophoresis. 17:1143-1150.

Buxton E.C, Westphall M., Jacobson W., Tong X.C, Smith L.M. 1996. Automation in large-scale DNA sequencing. Laboratory Robotics and Automation. 8:339-349.

Brow M.AD, Oldenburg M.C, Lyamichev V., Heisler L.M, Grotelueschen J., Lyamicheva N., Kozyavkin S., Fors L., Dahlberg J.E, Smith L.M et al.. 1996. The Cleavase Fragment Length Polymorphism (CFLP) assay. Biochemica. 1:14-15.

Brow M.AD, Oldenburg M.C, Lyamichev V., Heisler L.M, Lyamicheva N., Hall J.G, Eagan N.J, Olive D.M, Smith L.M, Fors L. et al.. 1996. Differentiation of bacterial 16S rRNA genes and intergenic regions and Mycobacterium tuberculosis katG genes by structure-specific endonuclease cleavage. Journal of Clinical Microbiology. 34:3129-3137.

Nelson CM, Zhu L, Tang W, Smith L.M, Crellin K, Berry J, Beauchamp JL. 1996. Fragmentation mechanisms of oligonucleotides in MALDI mass spectrometry. Proceedings of SPIE - The International Society for Optical Engineering. 2680:247-255.

Smith L.M, Brumley, Jr. RL, Buxton EC, Giddings M, Marchbanks M, Tong X. 1996. High-speed automated DNA sequencing in ultrathin slab gels. Methods in Enzymology. 271:219-237.

Chen D.H, Johnson A.F, Severin J.M, Rank D.R, Smith L.M, Guilfoyle R.A. 1996. M13-102: A vector for facilitating construction and improving quality of M13 shotgun libraries. Gene. 172:53-57.

Brow M.AD, Oldenburg M.C, Lyamichev V., Heisler L.M, Grotelueschen J., Lyamicheva N., Kozyavkin S., Fors L., Dahlberg J., Smith L.M et al.. 1996. Mutation detection by cleavase fragment length polymorphism. Focus. 18:2-5.

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