Publications

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Journal Article
Cartwright GS, Smith L.M, Heinzelmann EW, Ruebush MJ, J. Parce W, McConnell HM.  1982.  H-2Kk and vesicular stomatitis virus G proteins are not extensively associated in reconstituted membranes recognized by T cells. Proceedings of the National Academy of Sciences of the United States of America. 79:1506-10.
Li Q., Shortreed M.R, Wenger C.D, Frey B.L, Schaffer L.V, Scalf M., Smith L.M.  2017.  Global Post-Translational Modification Discovery. J Proteome Res.
Shortreed M.R, Wenger C.D, Frey B.L, Sheynkman G.M, Scalf M., Keller M.P, Attie A.D, Smith L.M.  2015.  Global Identification of Protein Post-translational Modifications in a Single-Pass Database Search. Journal of Proteome Research. 14:4714-4720.
Rolfs Z., Solntsev S.K, Shortreed M.R, Frey B.L, Smith L.M.  2019.  Global Identification of Post-Translationally Spliced Peptides with Neo-Fusion. Journal of Proteome Research. 18:349-358.
Griffin T.J, Smith L.M.  2000.  Genetic identification by mass spectrometric analysis of single-nucleotide polymorphisms: Ternary encoding of genotypes. Analytical Chemistry. 72:3298-3302.
Griffin T.J, Tang W., Smith L.M.  1997.  Genetic analysis by peptide nucleic acid affinity MALDI-TOF mass spectrometry. Nature Biotechnology. 15:1368-1372.
Smith L.M.  1993.  The Future of DNA-Sequencing. Science. 262:530-532.
Jia W.Y, Kim S.H, Scalf M.A, Tonzi P., Millikin R.J, Guns W.M, Liu L., Mastrocola A.S, Smith L.M, Huang T.T et al..  2021.  Fused in sarcoma regulates DNA replication timing and kinetics. Journal of Biological Chemistry. 297
Nelson CM, Zhu L, Tang W, Smith L.M, Crellin K, Berry J, Beauchamp JL.  1996.  Fragmentation mechanisms of oligonucleotides in MALDI mass spectrometry. Proceedings of SPIE - The International Society for Optical Engineering. 2680:247-255.
Lockett MR, Smith L.M.  2010.  Formation and Stability of Alkylthiol Monolayers on Carbon Substrates. Journal of Physical Chemistry C. 114:12635-12641.
Hoffman E.A, Frey B.L, Smith L.M, Auble D.T.  2015.  Formaldehyde Crosslinking: A Tool for the Study of Chromatin Complexes. Journal of Biological Chemistry. 290:26404-26411.
Hou W, Smith L.M.  1993.  Fluorescence-based DNA sequencing with hexamer primers. Nucleic Acids Research. 21:3331-2.
Smith L.M.  1988.  Fluorescence-based automated DNA sequence analysis. Genet. Eng. (N. Y.). 10:91-108.
Smith L.M, Sanders JZ, Kaiser RJ, Hughes P, Dodd C, Connell CR, Heiner C, Kent SBH, Hood LE.  1986.  Fluorescence detection in automated DNA sequence analysis. Nature. 321:674-9.
Jagtap P.D, Johnson J.E, Onsongo G., Sadler F.W, Murray K., Wang Y.B, Shenykrnan G.M, Bandhakavi S., Smith L.M, Griffin T.J.  2014.  Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework. Journal of Proteome Research. 13:5898-5908.
Kim HS, Qin H, Westphall MS, Smith L.M, Blick RH.  2007.  Field emission from a single nanomechanical pillar. Nanotechnology. 18
Tang W, Krause J, Zhu L, Smith L.M.  1997.  Factors influencing oligonucleotide stability in matrix-assisted laser desorption/ionization (MALDI) mass spectroscopy. International Journal of Mass Spectrometry and Ion Processes. 169/170:301-311.
Broderick A.H, Carter M.CD, Lockett M.R, Smith L.M, Lynn D.M.  2013.  Fabrication of Oligonucleotide and Protein Arrays on Rigid and Flexible Substrates Coated with Reactive Polymer Multilayers. ACS Applied Materials & Interfaces. 5:351-359.
Denton D.D, Thiel A.J, Smith L.M, Bajikar S., White V., Ghodssi R., Fish G., McCaughan L..  1994.  Fabrication of microstructures for use in biological and optical applications. Proceedings - Electrochemical Society. 94-14:103-14.
Lockett M.R, Smith L.M.  2009.  Fabrication and Characterization of DNA Arrays Prepared on Carbon-on-Metal Substrates. Analytical Chemistry. 81:6429-6437.
Murray JK, Sadowsky JD, Scalf M, Smith L.M, Tomita Y, Gellman S.H.  2008.  Exploration of structure - Activity relationships among foldamer ligands for a specific protein binding site via parallel and split-and-mix library synthesis. Journal of Combinatorial Chemistry. 10:204-215.
Schaffer L.V, Shortreed M.R, Cesnik A.J, Frey B.L, Solntsev S.K, Scalf M., Smith L.M.  2018.  Expanding Proteoform Identifications in Top-Down Proteomic Analyses by Constructing Proteoform Families. Analytical Chemistry. 90:1325-1333.
Frutos A.G, Smith L.M, Corn R.M.  1998.  Enzymatic ligation reactions of DNA "words" on surfaces for DNA computing. Journal of the American Chemical Society. 120:10277-10282.
Solntsev S.K, Shortreed M.R, Frey B.L, Smith L.M.  2018.  Enhanced Global Post-translational Modification Discovery with MetaMorpheus. Journal of Proteome Research. 17:1844-1851.
Guo Z., Liu Q.H, Smith L.M.  1997.  Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization. Nature Biotechnology. 15:331-335.

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