Publications

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Li Q.Y, Uygun B.E, Geerts S., Ozer S., Scalf M., Gilpin S.E, Ott H.C, Yarmush M.L, Smith L.M, Welham N.V et al..  2016.  Proteomic analysis of naturally-sourced biological scaffolds. Biomaterials. 75:37-46.
Levenstein M.E, Berggren W.T, Lee J.E, Conard K.R, Llanas R.A, Wagner R.J, Smith L.M, Thomson J.A.  2008.  Secreted Proteoglycans Directly Mediate Human Embryonic Stem Cell-Basic Fibroblast Growth Factor 2 Interactions Critical for Proliferation. Stem Cells. 26:3099-3107.
Lee JEun, Didier DN, Lockett MR, Scalf M, Greene AS, Olivier M, Smith L.M.  2007.  Characterization of vascular endothelial growth factor receptors on the endothelial cell surface during hypoxia using whole cell binding arrays. Analytical Biochemistry. 369:241-247.
Lee J.E, Mirza S.P, Didier D.N, Scalf M., Olivier M., Greene A.S, Smith L.M.  2008.  Identification of Cell Surface Markers to Differentiate Rat Endothelial and Fibroblast Cells Using Lectin Arrays and LC-ESI-MS/MS. Analytical Chemistry. 80:8269-8275.
Leduc R.D, Schwammle V., Shortreed M.R, Cesnik A.J, Solntsev S.K, Shaw J.B, Martin M.J, Vizcaino J.A, Alpi E., Danis P. et al..  2018.  ProForma: A Standard Proteoform Notation. Journal of Proteome Research. 17:1321-1325.
Lamos SM, Shortreed MR, Frey BL, Belshaw PJ, Smith L.M.  2007.  Relative quantification of carboxylic acid metabolites by liquid chromatography - Mass spectrometry using isotopic variants of cholamine. Analytical Chemistry. 79:5143-5149.
Lamos S.M, Krusemark C.J, McGee C.J, Scalf M., Smith L.M, Belshaw P.J.  2006.  Mixed isotope photoaffinity reagents for identification of small-molecule targets by mass spectrometry. Angewandte Chemie-International Edition. 45:4329-4333.
Ladror D.T, Frey B.L, Scalf M., Levenstein M.E, Artymiuk J.M, Smith L.M.  2014.  Methylation of yeast ribosomal protein S2 is elevated during stationary phase growth conditions. Biochemical and Biophysical Research Communications. 445:535-541.
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Kulevich SE, Frey BL, Kreitinger G, Smith L.M.  2010.  Alkylating Tryptic Peptides to Enhance Electrospray Ionization Mass Spectrometry Analysis. Analytical Chemistry. 82:10135-10142.
Krusemark CJ, Frey BL, Smith L.M, Belshaw PJ.  2011.  Complete Chemical Modification of Amine and Acid Functional Groups of Peptides and Small Proteins. 753:77-91.
Krusemark C.J, Frey B.L, Belshaw P.J, Smith L.M.  2009.  Modifying the Charge State Distribution of Proteins in Electrospray Ionization Mass Spectrometry by Chemical Derivatization. Journal of the American Society for Mass Spectrometry. 20:1617-1625.
Krause J, Scalf M, Smith L.M.  1999.  High resolution characterization of DNA fragment ions produced by ultraviolet matrix-assisted laser desorption/ionization using linear and reflecting time-of-flight mass spectrometry. Journal of the American Society for Mass Spectrometry. 10:423-429.
Kostichka AJ, Marchbanks ML, Brumley, Jr. RL, Drossman H, Smith L.M.  1992.  High speed automated DNA sequencing in ultrathin slab gels. Bio/Technology. 10:78-81.
Kolner DE, Mead DA, Smith L.M.  1992.  Ultrathin DNA sequencing gels using microtrough vertical electrophoresis plates. BioTechniques. 13:338-9.
Kolner DE, Guilfoyle RA, Smith L.M.  1994.  A high throughput system for the preparation of single stranded templates grown in microculture. DNA Sequence. 4:253-7.
Knoener R.A, Becker J.T, Scalf M., Sherer N.M, Smith L.M.  2017.  Elucidating the in vivo interactome of HIV-1 RNA by hybridization capture and mass spectrometry. Scientific Reports. 7
Knickerbocker T., Strother T., Schwartz M.P, Russell J.N, Butler J., Smith L.M, Hamers R.J.  2003.  DNA-modified diamond surfaces. Langmuir. 19:1938-1942.
Kim D.Y, Scalf M., Smith L.M, Vierstra R.D.  2013.  Advanced Proteomic Analyses Yield a Deep Catalog of Ubiquitylation Targets in Arabidopsis. Plant Cell. 25:1523-1540.
Kim S.H, Stiles S.G, Feichtmeier J.M, Ramesh N., Zhan L.H, Scalf M.A, Smith L.M, Pandey U.B, Tibbetts R.S.  2018.  Mutation-dependent aggregation and toxicity in a Drosophila model for UBQLN2-associated ALS. Human Molecular Genetics. 27:322-337.
Kim HS, Qin H, Westphall MS, Smith L.M, Blick RH.  2007.  Field emission from a single nanomechanical pillar. Nanotechnology. 18
Kent S., Hood L., Aebersold R., Teplow D., Smith L.M, Farnsworth V., Cartier P., Hines W., Hughes P., Dodd C..  1987.  Approaches to subpicomole protein sequencing. BioTechniques. 5:314-321.
Kennedy-Darling J., Guillen-Ahlers H., Shortreed M.R, Scalf M., Frey B.L, Kendziorski C., Olivier M., Gasch A.P, Smith L.M.  2014.  Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae. Journal of Proteome Research. 13:3810-3825.
Kennedy-Darling J, Smith L.M.  2014.  Measuring the Formaldehyde Protein-DNA Cross-Link Reversal Rate. Analytical Chemistry. 86:5678-5681.
Kennedy-Darling J., Holden M.T, Shortreed M.R, Smith L.M.  2014.  Multiplexed Programmable Release of Captured DNA. Chembiochem. 15:2353-2356.
Keller M.P, Paul P.K, Rabaglia M.E, Stapleton D.S, Schueler K.L, Broman A.T, Ye S.I, Leng N., Brandon C.J, Neto E.C et al..  2016.  The Transcription Factor Nfatc2 Regulates β-Cell Proliferation and Genes Associated with Type 2 Diabetes in Mouse and Human Islets. PLoS Genet. 12(e1006466)

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