Publications

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Journal Article
Kolner DE, Guilfoyle RA, Smith L.M.  1994.  A high throughput system for the preparation of single stranded templates grown in microculture. DNA Sequence. 4:253-7.
Smith L.M, Brumley, Jr. RL, Buxton EC, Giddings M, Marchbanks M, Tong X.  1996.  High-speed automated DNA sequencing in ultrathin slab gels. Methods in Enzymology. 271:219-237.
Westphall MS, Brumley, Jr. RL, Buxton EC, Smith L.M.  1995.  High-speed automated DNA sequencing utilizing from-the-side laser excitation. Proceedings of SPIE - The International Society for Optical Engineering. 2386:45-54.
Smith L.M.  1991.  High-speed DNA sequencing by capillary gel electrophoresis. Nature. 349:812-813.
Luckey JA, Drossman H, Kostichka T, Smith L.M.  1993.  High-speed DNA sequencing by capillary gel electrophoresis. Methods in Enzymology. 218:154-72.
Drossman H., Luckey J.A, Kostichka A.J, Dcunha J., Smith L.M.  1990.  High-speed separations of DNA sequencing reactions by capillary electrophoresis. Analytical Chemistry. 62:900-903.
Aebersold R., Agar J.N, Amster I.J, Baker M.S, Bertozzi C.R, Boja E.S, Costello C.E, Cravatt B.F, Fenselau C., Garcia B.A et al..  2018.  How many human proteoforms are there? Nature Chemical Biology. 14:206-214.
Cesnik A.J, Shortreed M.R, Sheynkman G.M, Frey B.L, Smith L.M.  2016.  Human Proteomic Variation Revealed by Combining RNA-Seq Proteogenomics and Global Post-Translational Modification (G-PTM) Search Strategy. Journal of Proteome Research. 15:800-808.
Dai Y.L, Millikin R.J, Rolfs Z., Shortreed M.R, Smith L.M.  2022.  A Hybrid Spectral Library and Protein Sequence Database Search Strategy for Bottom-Up and Top-Down Proteomic Data Analysis. Journal of Proteome Research. 21:2609-2618.
Guillen-Ahlers H., Rao P.K, Levenstein M.E, Kennedy-Darling J., Perumalla D.S, Jadhav A.Y, Glenn J.P, Ludwig-Kubinski A., Drigalenko E., Montoya M.J et al..  2016.  HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae. Genomics. 107:267-273.
Gillmor S.D, Thiel A.J, Strother T.C, Smith L.M, Lagally M.G.  2000.  Hydrophilic/hydrophobic patterned surfaces as templates for DNA arrays. Langmuir. 16:7223-7228.
Olson CN, Galloway MM, Yu G, Hedman CJ, Lockett MR, Yoon T.P, Stone EA, Smith L.M, Keutsch F.N.  2011.  Hydroxycarboxylic Acid-Derived Organosulfates: Synthesis, Stability, and Quantification in Ambient Aerosol. Environmental Science & Technology. 45:6468-6474.
Lee J.E, Mirza S.P, Didier D.N, Scalf M., Olivier M., Greene A.S, Smith L.M.  2008.  Identification of Cell Surface Markers to Differentiate Rat Endothelial and Fibroblast Cells Using Lectin Arrays and LC-ESI-MS/MS. Analytical Chemistry. 80:8269-8275.
Knoener R., Evans E., Becker J.T, Scalf M., Benner B., Sherer N.M, Smith L.M.  2021.  Identification of host proteins differentially associated with HIV-1 RNA splice variants. eLife. 10
Zhang X., Scalf M., Berggren T.W, Westphall M.S, Smith L.M.  2006.  Identification of mammalian cell lines using MALDI-TOF and LC-ESI-MS/MS mass spectrometry. Journal of the American Society for Mass Spectrometry. 17:490-499.
Peelen D., Smith L.M.  2005.  Immobilization of amine-modified oligonucleotides on aldehyde-terminated alkanethiol monolayers on gold. Langmuir. 21:266-271.
Schaffer L.V, Millikin R.J, Shortreed M.R, Scalf M., Smith L.M.  2020.  Improving Proteoform Identifications in Complex Systems Through Integration of Bottom-Up and Top-Down Data. Journal of Proteome Research. 19:3510-3517.
Phillips MF, Lockett MR, Rodesch MJ, Shortreed MR, Cerrina F, Smith L.M.  2008.  In situ oligonucleotide synthesis on carbon materials: stable substrates for microarray fabrication. Nucleic Acids Research. 36
Thiel A.J, Frutos A.G, Jordan C.E, Corn R.M, Smith L.M.  1997.  In situ surface plasmon resonance imaging detection of DNA hybridization to oligonucleotide arrays on gold surfaces. Analytical Chemistry. 69:4948-4956.
Broderick A.H, Lockett M.R, Buck M.E, Yuan Y., Smith L.M, Lynn D.M.  2012.  In situ Synthesis of Oligonucleotide Arrays on Surfaces Coated with Crosslinked Polymer Multilayers. Chemistry of Materials. 24:938-945.
J. Mellors S, Jorabchi K, Smith L.M, J. Ramsey M.  2010.  Integrated Microfluidic Device for Automated Single Cell Analysis Using Electrophoretic Separation and Electrospray Ionization Mass Spectrometry. Analytical Chemistry. 82:967-973.
Rolfs Z., Smith L.M.  2021.  Internal Fragment Ions Disambiguate and Increase Identifications in Top-Down Proteomics. Journal of Proteome Research. 20:5412-5418.
Wolford D.J, Gilliland G.D, Kuech T.F, Smith L.M, Martinsen J., Bradley J.A, Tsang C.F, Venkatasubramanian R., Ghandi S.K, Hjalmarson H.P.  1991.  INTRINSIC RECOMBINATION AND INTERFACE CHARACTERIZATION IN SURFACE-FREE GAAS STRUCTURES. Journal of Vacuum Science & Technology B. 9:2369-2376.
Lu M.C, Knickerbocker T., Cai W., Yang W.S, Hamers R.J, Smith L.M.  2004.  Invasive cleavage reactions on DNA-modified diamond surfaces. Biopolymers. 73:606-613.
Frey B.L, Krusemark C.J, Ledvina A.R, Coon J.J, Belshaw P.J, Smith L.M.  2008.  Ion-ion reactions with fixed-charge modified proteins to produce ions in a single, very high charge state. International Journal of Mass Spectrometry. 276:136-143.

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