Publications

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Knoener R.A, Becker J.T, Scalf M., Sherer N.M, Smith L.M.  2017.  Elucidating the in vivo interactome of HIV-1 RNA by hybridization capture and mass spectrometry. Scientific Reports. 7
Kolner DE, Guilfoyle RA, Smith L.M.  1994.  A high throughput system for the preparation of single stranded templates grown in microculture. DNA Sequence. 4:253-7.
Kolner DE, Mead DA, Smith L.M.  1992.  Ultrathin DNA sequencing gels using microtrough vertical electrophoresis plates. BioTechniques. 13:338-9.
Kostichka AJ, Marchbanks ML, Brumley, Jr. RL, Drossman H, Smith L.M.  1992.  High speed automated DNA sequencing in ultrathin slab gels. Bio/Technology. 10:78-81.
Krause J, Scalf M, Smith L.M.  1999.  High resolution characterization of DNA fragment ions produced by ultraviolet matrix-assisted laser desorption/ionization using linear and reflecting time-of-flight mass spectrometry. Journal of the American Society for Mass Spectrometry. 10:423-429.
Krusemark CJ, Frey BL, Smith L.M, Belshaw PJ.  2011.  Complete Chemical Modification of Amine and Acid Functional Groups of Peptides and Small Proteins. 753:77-91.
Krusemark C.J, Frey B.L, Belshaw P.J, Smith L.M.  2009.  Modifying the Charge State Distribution of Proteins in Electrospray Ionization Mass Spectrometry by Chemical Derivatization. Journal of the American Society for Mass Spectrometry. 20:1617-1625.
Kulevich SE, Frey BL, Kreitinger G, Smith L.M.  2010.  Alkylating Tryptic Peptides to Enhance Electrospray Ionization Mass Spectrometry Analysis. Analytical Chemistry. 82:10135-10142.
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Ladror D.T, Frey B.L, Scalf M., Levenstein M.E, Artymiuk J.M, Smith L.M.  2014.  Methylation of yeast ribosomal protein S2 is elevated during stationary phase growth conditions. Biochemical and Biophysical Research Communications. 445:535-541.
Lamos SM, Shortreed MR, Frey BL, Belshaw PJ, Smith L.M.  2007.  Relative quantification of carboxylic acid metabolites by liquid chromatography - Mass spectrometry using isotopic variants of cholamine. Analytical Chemistry. 79:5143-5149.
Lamos S.M, Krusemark C.J, McGee C.J, Scalf M., Smith L.M, Belshaw P.J.  2006.  Mixed isotope photoaffinity reagents for identification of small-molecule targets by mass spectrometry. Angewandte Chemie-International Edition. 45:4329-4333.
Leduc R.D, Schwammle V., Shortreed M.R, Cesnik A.J, Solntsev S.K, Shaw J.B, Martin M.J, Vizcaino J.A, Alpi E., Danis P. et al..  2018.  ProForma: A Standard Proteoform Notation. Journal of Proteome Research. 17:1321-1325.
Lee J.E, Mirza S.P, Didier D.N, Scalf M., Olivier M., Greene A.S, Smith L.M.  2008.  Identification of Cell Surface Markers to Differentiate Rat Endothelial and Fibroblast Cells Using Lectin Arrays and LC-ESI-MS/MS. Analytical Chemistry. 80:8269-8275.
Lee JEun, Didier DN, Lockett MR, Scalf M, Greene AS, Olivier M, Smith L.M.  2007.  Characterization of vascular endothelial growth factor receptors on the endothelial cell surface during hypoxia using whole cell binding arrays. Analytical Biochemistry. 369:241-247.
Levenstein M.E, Berggren W.T, Lee J.E, Conard K.R, Llanas R.A, Wagner R.J, Smith L.M, Thomson J.A.  2008.  Secreted Proteoglycans Directly Mediate Human Embryonic Stem Cell-Basic Fibroblast Growth Factor 2 Interactions Critical for Proliferation. Stem Cells. 26:3099-3107.
Li Q., Shortreed M.R, Wenger C.D, Frey B.L, Schaffer L.V, Scalf M., Smith L.M.  2017.  Global Post-Translational Modification Discovery. J Proteome Res.
Li Q.Y, Uygun B.E, Geerts S., Ozer S., Scalf M., Gilpin S.E, Ott H.C, Yarmush M.L, Smith L.M, Welham N.V et al..  2016.  Proteomic analysis of naturally-sourced biological scaffolds. Biomaterials. 75:37-46.
Li Q.Y, Chang Z., Oliveira G., Xiong M., Smith L.M, Frey B.L, Welham N.V.  2016.  Protein turnover during in vitro tissue engineering. Biomaterials. 81:104-113.
Lin Z., Strother T., Cai W., Cao X.P, Smith L.M, Hamers R.J.  2002.  DNA attachment and hybridization at the silicon (100) surface. Langmuir. 18:788-796.
Ling C., Nishimoto K., Rolfs Z., Smith L.M, Frey B.L, Wellham N.V.  2019.  Differentiated fibrocytes assume a functional mesenchymal phenotype with regenerative potential. Science advances. 5(5)
Ling C.Y, Li Q.Y, Brown M.E, Kishimoto Y., Toya Y., Devine E.E, Choi K.O, Nishimoto K., Norman I.G, Tsegyal T. et al..  2015.  Bioengineered vocal fold mucosa for voice restoration. Science Translational Medicine. 7
Liu Q., Guo Z., Fei Z., Condon A.E, Corn R.M, Lagally M.G, Smith L.M.  1999.  A surface-based approach to DNA computation. :123-132.
Liu Q., Wang L., Frutos A.G, Condon A.E, Corn R.M, Smith L.M.  2000.  DNA computing on surfaces. Nature. 403:175-9.
Liu Q., Frutos A.G, Wang L., Thiel A.J, Gillmor S.D, Strother C.T, Condon A.E, Corn R.M, Lagally M.G, Smith L.M.  1999.  Progress toward demonstration of a surface based DNA computation: a one word approach to solve a model satisfiability problem. Biosystems. 52:25-33.
Liu R.R, Li Q.Y, Smith L.M.  2014.  Detection of Large Ions in Time-of-Flight Mass Spectrometry: Effects of Ion Mass and Acceleration Voltage on Microchannel Plate Detector Response. Journal of the American Society for Mass Spectrometry. 25:1374-1383.

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