Publications

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Journal Article
Frutos A.G, Smith L.M, Corn R.M.  1998.  Enzymatic ligation reactions of DNA "words" on surfaces for DNA computing. Journal of the American Chemical Society. 120:10277-10282.
Miller R.M, Jordan B., Mehlferber M.M, Jeffery E.D, Chatzipantsiou C., Kaur S., Millikin R.J, Dai Y.X, Tiberi S., Castaldi P.J et al..  2022.  Enhanced protein isoform characterization through long-read proteogenomics. Genome Biology. 23
Miller R.M, Jordan B., Mehlferber M.M, Jeffery E.D, Chatzipantsiou C., Kaur S., Millikin R.J, Dai Y.X, Tiberi S., Castaldi P.J et al..  2022.  Enhanced protein isoform characterization through long-read proteogenomics. Genome Biology. 23
Miller R.M, Jordan B., Mehlferber M.M, Jeffery E.D, Chatzipantsiou C., Kaur S., Millikin R.J, Dai Y.X, Tiberi S., Castaldi P.J et al..  2022.  Enhanced protein isoform characterization through long-read proteogenomics. Genome Biology. 23
Shortreed M.R, Frey B.L, Scalf M., Knoener R.A, Cesnik A.J, Smith L.M.  2016.  Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements. Journal of Proteome Research. 15:1213-1221.
Dai Y.X, Shortreed M.R, Scalf M., Frey B.L, Cesnik A.J, Solntsev S., Schaffer L.V, Smith L.M.  2017.  Elucidating Escherichia coil Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database. Journal of Proteome Research. 16:4156-4165.
Murray J.K, Farooqi B., Sadowsky J.D, Scalf M., Freund W.A, Smith L.M, Chen J.D, Gellman S.H.  2005.  Efficient synthesis of a beta-peptide combinatorial library with microwave irradiation. Journal of the American Chemical Society. 127:13271-13280.
Yang Z., Qian S., Scheid R.N, Lu L., Chen X., Liu R., Du X., Lv X., Boersma M.D, Scalf M. et al..  2018.  EBS is a bivalent histone reader that regulates floral phase transition in Arabidopsis. Nature genetics. 50(9)
Yang W.S, Auciello O., Butler J.E, Cai W., Carlisle J.A, Gerbi J., Gruen D.M, Knickerbocker T., Lasseter T.L, Russell J.N et al..  2002.  DNA-modified nanocrystalline diamond thin-films as stable, biologically active substrates. Nature Materials. 1:253-257.
Yang W.S, Auciello O., Butler J.E, Cai W., Carlisle J.A, Gerbi J., Gruen D.M, Knickerbocker T., Lasseter T.L, Russell J.N et al..  2002.  DNA-modified nanocrystalline diamond thin-films as stable, biologically active substrates. Nature Materials. 1:253-257.
Liu Q.H, Frutos A.G, Thiel A.J, Corn R.M, Smith L.M.  1998.  DNA computing on surfaces: Encoding information at the single base level. Journal of Computational Biology. 5:269-278.
Liu Q., Wang L., Frutos A.G, Condon A.E, Corn R.M, Smith L.M.  2000.  DNA computing on surfaces. Nature. 403:175-9.
Liu Q., Wang L., Frutos A.G, Condon A.E, Corn R.M, Smith L.M.  2000.  DNA computing on surfaces. Nature. 403:175-9.
Lin Z., Strother T., Cai W., Cao X.P, Smith L.M, Hamers R.J.  2002.  DNA attachment and hybridization at the silicon (100) surface. Langmuir. 18:788-796.
Lin Z., Strother T., Cai W., Cao X.P, Smith L.M, Hamers R.J.  2002.  DNA attachment and hybridization at the silicon (100) surface. Langmuir. 18:788-796.
Frutos A.G, Liu Q.H, Thiel A.J, Sanner A.MW, Condon A.E, Smith L.M, Corn R.M.  1997.  Demonstration of a word design strategy for DNA computing on surfaces. Nucleic Acids Research. 25:4748-4757.
Frutos A.G, Liu Q.H, Thiel A.J, Sanner A.MW, Condon A.E, Smith L.M, Corn R.M.  1997.  Demonstration of a word design strategy for DNA computing on surfaces. Nucleic Acids Research. 25:4748-4757.
Sun B, Colavita PE, Kim H, Lockett M, Marcus MS, Smith L.M, Hamers R.J.  2006.  Covalent Photochemical Functionalization of Amorphous Carbon Thin Films for Integrated Real-Time Biosensing. Langmuir. 22:9598-9605.
Chen S., Phillips M.F, Cerrina F., Smith L.M.  2009.  Controlling Oligonucleotide Surface Density in Light-Directed DNA Array Fabrication. Langmuir. 25:6570-6575.
Chen S., Phillips M.F, Cerrina F., Smith L.M.  2009.  Controlling Oligonucleotide Surface Density in Light-Directed DNA Array Fabrication. Langmuir. 25:6570-6575.
Spiniello M., Steinbrink M.I, Cesnik A.J, Miller R.M, Scalf M., Shortreed M.R, Smith L.M.  2019.  Comprehensive in vivo identification of the c-Myc mRNA interactome using HyPR-MS. Cold Spring Harbor Laboratory Press.
Cai W., Lin Z., Strother T., Smith L.M, Hamers R.J.  2002.  Chemical modification and patterning of iodine-terminated silicon surfaces using visible light. Journal of Physical Chemistry B. 106:2656-2664.
Frey B.L, Ladror D.T, Sondalle S.B, Krusemark C.J, Jue A.L, Coon J.J, Smith L.M.  2013.  Chemical Derivatization of Peptide Carboxyl Groups for Highly Efficient Electron Transfer Dissociation. Journal of the American Society for Mass Spectrometry. 24:1710-1721.
Russell J.D, Scalf M., Book A.J, Ladror D.T, Vierstra R.D, Smith L.M, Coon J.J.  2013.  Characterization and Quantification of Intact 26S Proteasome Proteins by Real-Time Measurement of Intrinsic Fluorescence Prior to Top-down Mass Spectrometry. Plos One. 8
Lockett MR, Weibel SC, Phillips MF, Shortreed MR, Sun B, Corn RM, Hamers R.J, Cerrina F, Smith L.M.  2008.  Carbon-on-metal films for surface plasmon resonance detection of DNA arrays. Journal of the American Chemical Society. 130:8611-8613.

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