Publications

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Jagtap P.D, Johnson J.E, Onsongo G., Sadler F.W, Murray K., Wang Y.B, Shenykrnan G.M, Bandhakavi S., Smith L.M, Griffin T.J.  2014.  Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework. Journal of Proteome Research. 13:5898-5908.
Jarecki JL, Frey BL, Smith L.M, Stretton AO.  2011.  Discovery of Neuropeptides in the Nematode Ascaris suum by Database Mining and Tandem Mass Spectrometry. Journal of Proteome Research. 10:3098-3106.
Ji H, Smith L.M, Guilfoyle RA.  1994.  Rapid isolation of cosmid insert DNA by triple-helix-mediated affinity capture. Genetic Analysis, Techniques and Applications. 11:43-7.
Ji H.M, Francisco T., Smith L.M, Guilfoyle R.A.  1996.  Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture. Genomics. 31:185-192.
Ji H, Smith L.M.  1993.  Rapid purification of double-stranded DNA by triple-helix-mediated affinity capture. Analytical Chemistry. 65:1323-8.
Johnson A.F, Wang R.F, Ji H.M, Chen D.H, Guilfoyle R.A, Smith L.M.  1996.  Purification of single-stranded M13 DNA by cooperative triple-helix-mediated affinity capture. Analytical Biochemistry. 234:83-95.
Johnson AF, Struthers MD, Pierson KB, Mangel WF, Smith L.M.  1993.  Nonisotopic DNA detection system employing elastase and a fluorogenic rhodamine substrate. Analytical Chemistry. 65:2352-9.
Jorabchi K., Westphall M.S, Smith L.M.  2008.  Charge assisted laser desorption/ionization mass spectrometry of droplets. Journal of the American Society for Mass Spectrometry. 19:833-840.
Jorabchi K., Smith L.M.  2009.  Single Droplet Separations and Surface Partition Coefficient Measurements Using Laser Ablation Mass Spectrometry. Analytical Chemistry. 81:9682-9688.
K
Keller M.P, Paul P.K, Rabaglia M.E, Stapleton D.S, Schueler K.L, Broman A.T, Ye S.I, Leng N., Brandon C.J, Neto E.C et al..  2016.  The Transcription Factor Nfatc2 Regulates β-Cell Proliferation and Genes Associated with Type 2 Diabetes in Mouse and Human Islets. PLoS Genet. 12(e1006466)
Kennedy-Darling J., Holden M.T, Shortreed M.R, Smith L.M.  2014.  Multiplexed Programmable Release of Captured DNA. Chembiochem. 15:2353-2356.
Kennedy-Darling J., Guillen-Ahlers H., Shortreed M.R, Scalf M., Frey B.L, Kendziorski C., Olivier M., Gasch A.P, Smith L.M.  2014.  Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae. Journal of Proteome Research. 13:3810-3825.
Kennedy-Darling J, Smith L.M.  2014.  Measuring the Formaldehyde Protein-DNA Cross-Link Reversal Rate. Analytical Chemistry. 86:5678-5681.
Kent S., Hood L., Aebersold R., Teplow D., Smith L.M, Farnsworth V., Cartier P., Hines W., Hughes P., Dodd C..  1987.  Approaches to subpicomole protein sequencing. BioTechniques. 5:314-321.
Kim D.Y, Scalf M., Smith L.M, Vierstra R.D.  2013.  Advanced Proteomic Analyses Yield a Deep Catalog of Ubiquitylation Targets in Arabidopsis. Plant Cell. 25:1523-1540.
Kim S.H, Stiles S.G, Feichtmeier J.M, Ramesh N., Zhan L.H, Scalf M.A, Smith L.M, Pandey U.B, Tibbetts R.S.  2018.  Mutation-dependent aggregation and toxicity in a Drosophila model for UBQLN2-associated ALS. Human Molecular Genetics. 27:322-337.
Kim HS, Qin H, Westphall MS, Smith L.M, Blick RH.  2007.  Field emission from a single nanomechanical pillar. Nanotechnology. 18
Knickerbocker T., Strother T., Schwartz M.P, Russell J.N, Butler J., Smith L.M, Hamers R.J.  2003.  DNA-modified diamond surfaces. Langmuir. 19:1938-1942.
Knoener R.A, Becker J.T, Scalf M., Sherer N.M, Smith L.M.  2017.  Elucidating the in vivo interactome of HIV-1 RNA by hybridization capture and mass spectrometry. Scientific Reports. 7
Kolner DE, Mead DA, Smith L.M.  1992.  Ultrathin DNA sequencing gels using microtrough vertical electrophoresis plates. BioTechniques. 13:338-9.

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