Mass Spectrometric Analyses Reveal a Central Role for Ubiquitylation in Remodeling the Arabidopsis Proteome during Photomorphogenesis. Molecular Plant. 10:846-865.. 2017.
Multiplexed Sequence-Specific Capture of Chromatin and Mass Spectrometric Discovery of Associated Proteins. Analytical Chemistry. 89:7841-7846.. 2017.
Parallel DNA Synthesis on Poly(ethylene terephthalate). Chembiochem. 18:1914-1916.. 2017.
Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements. Journal of Proteome Research. 15:1213-1221.. 2016.
Human Proteomic Variation Revealed by Combining RNA-Seq Proteogenomics and Global Post-Translational Modification (G-PTM) Search Strategy. Journal of Proteome Research. 15:800-808.. 2016.
HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae. Genomics. 107:267-273.. 2016.
Morpheus Spectral Counter: A computational tool for label-free quantitative mass spectrometry using the Morpheus search engine. Proteomics. 16:920-924.. 2016.
Protein turnover during in vitro tissue engineering. Biomaterials. 81:104-113.. 2016.
Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation. 9:521-545.. 2016.
Proteomic analysis of naturally-sourced biological scaffolds. Biomaterials. 75:37-46.. 2016.
Bioengineered vocal fold mucosa for voice restoration. Science Translational Medicine. 7. 2015.
Carbon Substrates: A Stable Foundation for Biomolecular Arrays. Annu. Rev. Anal. Chem.. 8:263-285.. 2015.
Formaldehyde Crosslinking: A Tool for the Study of Chromatin Complexes. Journal of Biological Chemistry. 290:26404-26411.. 2015.
Global Identification of Protein Post-translational Modifications in a Single-Pass Database Search. Journal of Proteome Research. 14:4714-4720.. 2015.
Photolithographic Synthesis of High-Density DNA and RNA Arrays on Flexible, Transparent, and Easily Subdivided Plastic Substrates. Analytical Chemistry. 87:11420-11428.. 2015.
Advanced methods for the analysis of chromatin-associated proteins. Physiological Genomics. 46:441-447.. 2014.
Detection of Large Ions in Time-of-Flight Mass Spectrometry: Effects of Ion Mass and Acceleration Voltage on Microchannel Plate Detector Response. Journal of the American Society for Mass Spectrometry. 25:1374-1383.. 2014.
Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae. Journal of Proteome Research. 13:3810-3825.. 2014.
Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework. Journal of Proteome Research. 13:5898-5908.. 2014.
Large-Scale Mass Spectrometric Detection of Variant Peptides Resulting from Nonsynonymous Nucleotide Differences. Journal of Proteome Research. 13:228-240.. 2014.
Measuring the Formaldehyde Protein-DNA Cross-Link Reversal Rate. Analytical Chemistry. 86:5678-5681.. 2014.
Methylation of yeast ribosomal protein S2 is elevated during stationary phase growth conditions. Biochemical and Biophysical Research Communications. 445:535-541.. 2014.