Publications

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[ Author(Desc)] Title Type Year
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F
Fitzgerald M.C, Parr G.R, Smith L.M.  1993.  Basic matrices for the matrix-assisted laser desorption/ionization mass spectrometry of proteins and oligonucleotides. Analytical Chemistry. 65:3204-3211.
Fitzgerald M.C, Zhu L., Smith L.M.  1993.  The analysis of mock DNA sequencing reactions using matrix-assisted laser desorption/ionization mass spectrometry. Rapid Communications in Mass Spectrometry. 7:895-897.
Fitzgerald MC, Smith L.M.  1995.  Mass spectrometry of nucleic acids: the promise of matrix-assisted laser desorption-ionization (MALDI) mass spectrometry. Annual Review of Biophysics & Biomolecular Structure. 24:117-40.
Freed JK, Shortreed MR, Kleefisch CJ, Smith L.M, Greene AS.  2008.  Revealing the role of phosphatidylserine in shear stress-mediated protection in endothelial cells. Endothelium-Journal of Endothelial Cell Research. 15:225-230.
Frey B.L, Krusemark C.J, Ledvina A.R, Coon J.J, Belshaw P.J, Smith L.M.  2008.  Ion-ion reactions with fixed-charge modified proteins to produce ions in a single, very high charge state. International Journal of Mass Spectrometry. 276:136-143.
Frey B.L, Ladror D.T, Sondalle S.B, Krusemark C.J, Jue A.L, Coon J.J, Smith L.M.  2013.  Chemical Derivatization of Peptide Carboxyl Groups for Highly Efficient Electron Transfer Dissociation. Journal of the American Society for Mass Spectrometry. 24:1710-1721.
Frey B.L, Lin Y., Westphall M.S, Smith L.M.  2005.  Controlling gas-phase reactions for efficient charge reduction electrospray mass spectrometry of intact proteins. Journal of the American Society for Mass Spectrometry. 16:1876-1887.
Frutos A.G, Smith L.M, Corn R.M.  1998.  Enzymatic ligation reactions of DNA "words" on surfaces for DNA computing. Journal of the American Chemical Society. 120:10277-10282.
Frutos A.G, Liu Q.H, Thiel A.J, Sanner A.MW, Condon A.E, Smith L.M, Corn R.M.  1997.  Demonstration of a word design strategy for DNA computing on surfaces. Nucleic Acids Research. 25:4748-4757.
G
Gemperline D.C, Scalf M., Smith L.M, Vierstra R.D.  2016.  Morpheus Spectral Counter: A computational tool for label-free quantitative mass spectrometry using the Morpheus search engine. Proteomics. 16:920-924.
Gemperline D.C, Marshall R.S, Lee K.H, Zhao Q.Z, Hu W.M, McLoughlin F., Scalf M., Smith L.M, Vierstra R.D.  2019.  Proteomic analysis of affinity-purified 26S proteasomes identifies a suite of assembly chaperones in Arabidopsis. Journal of Biological Chemistry. 294:17570-17592.
Giddings M.C, Severin J., Westphall M., Wu J.Z, Smith L.M.  1998.  A software system for data analysis in automated DNA sequencing. Genome Research. 8:644-665.
Giddings MC, Brumley, Jr. RL, Haker M, Smith L.M.  1993.  An adaptive, object oriented strategy for base calling in DNA sequence analysis. Nucleic Acids Research. 21:4530-40.
Gilliland G.D, Petrovic M.S, Hjalmarson H.P, Wolford D.J, Northrop G.A, Kuech T.F, Smith L.M, Bradley J.A.  1998.  Time-dependent heterointerfacial band bending and quasi-two-dimensionl excitonic transport in GaAs structures. Physical Review B. 58:4728-4732.
Gillmor S.D, Thiel A.J, Strother T.C, Smith L.M, Lagally M.G.  2000.  Hydrophilic/hydrophobic patterned surfaces as templates for DNA arrays. Langmuir. 16:7223-7228.
Griffin TJ, Hall JG, Prudent JR, Smith L.M.  1999.  Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 96:6301-6306.
Griffin T.J, Tang W., Smith L.M.  1997.  Genetic analysis by peptide nucleic acid affinity MALDI-TOF mass spectrometry. Nature Biotechnology. 15:1368-1372.
Griffin T.J, Smith L.M.  2000.  Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry. Trends in Biotechnology. 18:77-84.
Griffin T.J, Smith L.M.  2000.  Genetic identification by mass spectrometric analysis of single-nucleotide polymorphisms: Ternary encoding of genotypes. Analytical Chemistry. 72:3298-3302.
Griffin TJ, Tang W, Smith L.M.  1999.  MALDI-TOF mass spectrometric detection of PNA hybrids for genetic analysis. :143-154.
Griffin T.J, Smith L.M.  1998.  An approach to predicting the stabilities of peptide nucleic acid : DNA duplexes. Analytical Biochemistry. 260:56-63.
Guilfoyle RA, Leeck CL, K. Kroening D, Smith L.M, Guo Z.  1997.  Ligation-mediated PCR amplification of specific fragments from a Class-II restriction endonuclease. Nucleic Acids Research. 25:1854-1858.
Guilfoyle RA, Smith L.M.  1994.  A direct selection strategy for shotgun cloning and sequencing in the bacteriophage M13. Nucleic Acids Research. 22:100-7.
Guillen-Ahlers H., Shortreed M.R, Smith L.M, Olivier M..  2014.  Advanced methods for the analysis of chromatin-associated proteins. Physiological Genomics. 46:441-447.
Guillen-Ahlers H, Rao P.K, Perumalla D.S, Montoya M.J, Jadhav A.YL, Shortreed M.R, Smith L.M, Olivier M.  2018.  Adaptation of Hybridization Capture of Chromatin-associated Proteins for Proteomics to Mammalian Cells. Journal of Visualized Experiments. (136)

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