Publications

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Smith L.M.  1991.  High-speed DNA sequencing by capillary gel electrophoresis. Nature. 349:812-813.
Smith L.M, Hood L.  1987.  Mapping and sequencing the human genome: how to proceed. Bio/Technology. 5:933-9.
Smith L.M.  1993.  DNA electrophoresis. Current Opinion in Biotechnology. 4:37-40.
Smith L.M, Rubenstein JLR, J. Parce W, McConnell HM.  1980.  Lateral diffusion of M-13 coat protein in mixtures of phosphatidylcholine and cholesterol. Biochemistry. 19:5907-11.
Smith L.M, Brumley, Jr. RL, Buxton EC, Giddings M, Marchbanks M, Tong X.  1996.  High-speed automated DNA sequencing in ultrathin slab gels. Methods in Enzymology. 271:219-237.
Smith L.M, Fung S, Hunkapiller MW, Hunkapiller TJ, Hood LE.  1985.  The synthesis of oligonucleotides containing an aliphatic amino group at the 5' terminus: synthesis of fluorescent DNA primers for use in DNA sequence analysis. Nucleic Acids Research. 13:2399-412.
Smith L.M.  1989.  Automated DNA sequencing and the analysis of the human genome. Genome. 31:929-37.
Smith L.M, Thomas P.M, Shortreed M.R, Schaffer L.V, Fellers R.T, LeDuc R.D, Tucholski T., Ge Y., Agar J.A, Anderson L.C et al..  2019.  A five-level classification system for proteoform identifications. Nature methods. 16(10)
Smith L.M.  2008.  Is charge reduction in ESI really necessary? Journal of the American Society for Mass Spectrometry. 19:629-631.
Smith L.M.  1993.  Automated DNA-Sequencing - a Look into the Future. Cancer Detection and Prevention. 17:283-288.
Smith L.M, Kelleher N.L, Ge Y., Down PConsortium.  2013.  Proteoform: a single term describing protein complexity. Nature Methods. 10:186-187.
Smith L.M.  1996.  Sequence from spectrometry: a realistic prospect? Nature Biotechnology. 14:1084,1087.
Smith L.M.  1988.  Automated synthesis and sequence analysis of biological macromolecules. Analytical Chemistry. 60:381A-382A,384A-390A.
Smith L.M, Corn R.M, Condon A.E, Lagally M.G, Frutos A.G, Liu Q.H, Thiel A.J.  1998.  A surface-based approach to DNA computation. Journal of Computational Biology. 5:255-267.
Smith L.M, Weis RM, McConnell HM.  1981.  Measurement of rotational motion in membranes using fluorescence recovery after photobleaching. Biophysical Journal. 36:73-91.
Smith L.M.  2010.  Nanotechnology: Molecular robots on the move. Nature. 465:167-168.
Shortreed M.R, Wenger C.D, Frey B.L, Sheynkman G.M, Scalf M., Keller M.P, Attie A.D, Smith L.M.  2015.  Global Identification of Protein Post-translational Modifications in a Single-Pass Database Search. Journal of Proteome Research. 14:4714-4720.
Shortreed M.R, Lamos S.M, Frey B.L, Phillips M.F, Patel M., Belshaw P.J, Smith L.M.  2006.  Ionizable isotopic labeling reagent for relative quantification of amine metabolites by mass spectrometry. Analytical Chemistry. 78:6398-6403.
Shortreed M.R, Frey B.L, Scalf M., Knoener R.A, Cesnik A.J, Smith L.M.  2016.  Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements. Journal of Proteome Research. 15:1213-1221.
Shortreed M.R, Chang S.B, Hong D.G, Phillips M., Campion B., Tulpan D.C, Andronescu M., Condon A., Hoos H.H, Smith L.M.  2005.  A thermodynamic approach to designing structure-free combinatorial DNA word sets. Nucleic Acids Research. 33:4965-4977.
Sheynkman G.M, Shortreed M.R, Frey B.L, Smith L.M.  2013.  Discovery and Mass Spectrometric Analysis of Novel Splice-junction Peptides Using RNA-Seq. Molecular & Cellular Proteomics. 12:2341-2353.
Sheynkman GM, Shortreed MR, Frey BL, Scalf M, Smith L.M.  2014.  Large-Scale Mass Spectrometric Detection of Variant Peptides Resulting from Nonsynonymous Nucleotide Differences. Journal of Proteome Research. 13:228-240.
Sheynkman G.M, Shortreed M.R, Cesnik A.J, Smith L.M.  2016.  Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation. 9:521-545.
Schaffer L.V, Rensvold J.W, Shortreed M.R, Cesnik A.J, Jochem A., Scalf M., Frey B.L, Pagliarini D.J, Smith L.M.  2018.  Identification and quantification of murine mitochondrial proteoforms using an integrated top-down and intact-mass strategy. Journal of Proteome Research. 17(10):3526-3536.
Schaffer L.V, Tucholski T., Shortreed M.R, Ge Y., Smith L.M.  2019.  Intact-Mass Analysis Facilitating the Identification of Large Human Heart Proteoforms. Analytical Chemistry. 91(17)

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