Publications

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Nie B., Shortreed M.R, Smith L.M.  2005.  Scoring single-nucleotide polymorphisms at the single-molecule level by counting individual DNA cleavage events on surfaces. Analytical Chemistry. 77:6594-6600.
Levenstein M.E, Berggren W.T, Lee J.E, Conard K.R, Llanas R.A, Wagner R.J, Smith L.M, Thomson J.A.  2008.  Secreted Proteoglycans Directly Mediate Human Embryonic Stem Cell-Basic Fibroblast Growth Factor 2 Interactions Critical for Proliferation. Stem Cells. 26:3099-3107.
Mouradian S., Nelson C.M, Smith L.M.  1996.  A self-assembled matrix monolayer for UV-MALDI mass spectrometry. Journal of the American Chemical Society. 118:8639-8645.
Mouradian S., Brumley R.L, Smith L.M.  1994.  Separating field strength, temperature, and pulsing effects in pulsed field electrophoresis. Electrophoresis. 15:1084-1090.
Smith L.M.  1996.  Sequence from spectrometry: a realistic prospect? Nature Biotechnology. 14:1084,1087.
Wu C.H, Chen S.Y, Shortreed M.R, Kreitinger G.M, Yuan Y., Frey B.L, Zhang Y., Mirza S., Cirillo L.A, Olivier M. et al..  2011.  Sequence-Specific Capture of Protein-DNA Complexes for Mass Spectrometric Protein Identification. Plos One. 6
Chen D.H, Peterson M.D, Brumley R.L, Giddings M.C, Buxton E.C, Westphall M., Smith L.M.  1995.  Side Excitation of Fluorescence in Ultrathin Slab Gel Electrophoresis. Analytical Chemistry. 67:3405-3411.
Jorabchi K., Smith L.M.  2009.  Single Droplet Separations and Surface Partition Coefficient Measurements Using Laser Ablation Mass Spectrometry. Analytical Chemistry. 81:9682-9688.
Griffin T.J, Smith L.M.  2000.  Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry. Trends in Biotechnology. 18:77-84.
Berggren W.T, Westphall M.S, Smith L.M.  2002.  Single-pulse nanoelectrospray ionization. Analytical Chemistry. 74:3443-3448.
Hallows WC, Yu W, Smith BC, Devires MK, Ellinger JJ, Someya S, Shortreed MR, Prolla T, Markley JL, Smith L.M et al..  2011.  Sirt3 Promotes the Urea Cycle and Fatty Acid Oxidation during Dietary Restriction. Molecular Cell. 41:139-149.
Chen X., Smith L.M, Bradbury E.M.  2000.  Site-specific mass tagging with stable isotopes in proteins for accurate and efficient protein identification. Analytical Chemistry. 72:1134-1143.
Giddings M.C, Severin J., Westphall M., Wu J.Z, Smith L.M.  1998.  A software system for data analysis in automated DNA sequencing. Genome Research. 8:644-665.
Tong X, Smith L.M.  1993.  Solid phase purification in automated DNA sequencing. DNA Sequence. 4:151-62.
Tong X.C, Smith L.M.  1992.  Solid-phase method for the purification of DNA sequencing reactions. Analytical Chemistry. 64:2672-2677.
Peelen D., Kodoyianni V., Lee J., Zheng T., Shortreed M.R, Smith L.M.  2006.  Specific capture of mammalian cells by cell surface receptor binding to ligand immobilized on gold thin films. Journal of Proteome Research. 5:1580-1585.
Cesnik A.J, Miller R.M, Ibrahim K., Lu L., Millikin R.J, Shortreed M.R, Frey B.L, Smith L.M.  2021.  Spritz: A Proteogenomic Database Engine. Journal of Proteome Research. 20:1826-1834.
Chen X., Fei Z.D, Smith L.M, Bradbury E.M, Majidi V..  1999.  Stable-isotope-assisted MALDI-TOF mass spectrometry for accurate determination of nucleotide compositions of PCR products. Analytical Chemistry. 71:3118-3125.
Collins F.S, Benjamin L.J, Botstein D., Cox J.R, Davidson N., Gray J.W, Holtzman N., Housman D.E, Jamison K.R, Nelkin D. et al..  1994.  Statement on use of DNA testing for presymptomatic identification of cancer risk. JAMA. 271:785-785.
Lu M.C, Hall J.G, Shortreed M.R, Wang L.M, Berggren W.T, Stevens P.W, Kelso D.M, Lyamichev V., Neri B., Skinner J.L et al..  2002.  Structure-specific DNA cleavage on surfaces. Journal of the American Chemical Society. 124:7924-7931.
Qin H., Kim H.S, Blick R.H, Westphall M.S, Smith L.M.  2007.  Subthreshold field emission from thin silicon membranes. Applied Physics Letters. 91
Rytz T.C, Miller M.J, McLoughlin F., Augustine R.C, Marshall R.S, Juan Y.T, Charng Y.Y, Scalf M., Smith L.M, Vierstra R.D.  2018.  SUMOylome Profiling Reveals a Diverse Array of Nuclear Targets Modified by the SUMO Ligase SIZ1 during Heat Stress. Plant Cell. 30:1077-1099.

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