Publications

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Journal Article
Brow M.AD, Oldenburg M.C, Lyamichev V., Heisler L.M, Grotelueschen J., Lyamicheva N., Kozyavkin S., Fors L., Dahlberg J., Smith L.M et al..  1996.  Mutation detection by cleavase fragment length polymorphism. Focus. 18:2-5.
Dai Y, Kennedy-Darling J, Shortreed MR, Scalf M, Gasch AP, Smith L.M.  2017.  Multiplexed Sequence-Specific Capture of Chromatin and Mass Spectrometric Discovery of Associated Proteins. Analytical Chemistry. 89:7841-7846.
Kennedy-Darling J., Holden M.T, Shortreed M.R, Smith L.M.  2014.  Multiplexed Programmable Release of Captured DNA. Chembiochem. 15:2353-2356.
Berggren W.T, Takova T., Olson M.C, Eis P.S, Kwiatkowski R.W, Smith L.M.  2002.  Multiplexed gene expression analysis using the invader RNA assay with MALDI-TOF mass spectrometry detection. Analytical Chemistry. 74:1745-1750.
Krusemark C.J, Frey B.L, Belshaw P.J, Smith L.M.  2009.  Modifying the Charge State Distribution of Proteins in Electrospray Ionization Mass Spectrometry by Chemical Derivatization. Journal of the American Society for Mass Spectrometry. 20:1617-1625.
Lamos S.M, Krusemark C.J, McGee C.J, Scalf M., Smith L.M, Belshaw P.J.  2006.  Mixed isotope photoaffinity reagents for identification of small-molecule targets by mass spectrometry. Angewandte Chemie-International Edition. 45:4329-4333.
Carr A.V, Frey B.L, Scalf M., Cesnik A.J, Rolfs Z., Pike K.A, Yang B., Keller M.P, Jarrard D.F, Shortreed M.R et al..  2022.  MetaNetwork Enhances Biological Insights from Quantitative Proteomics Differences by Combining Clustering and Enrichment Analyses. Journal of Proteome Research. 21:410-419.
Kennedy-Darling J, Smith L.M.  2014.  Measuring the Formaldehyde Protein-DNA Cross-Link Reversal Rate. Analytical Chemistry. 86:5678-5681.
Aguilar-Hernandez V., Kim D.Y, Stankey R.J, Scalf M., Smith L.M, Vierstra R.D.  2017.  Mass Spectrometric Analyses Reveal a Central Role for Ubiquitylation in Remodeling the Arabidopsis Proteome during Photomorphogenesis. Molecular Plant. 10:846-865.
Guilfoyle RA, Leeck CL, K. Kroening D, Smith L.M, Guo Z.  1997.  Ligation-mediated PCR amplification of specific fragments from a Class-II restriction endonuclease. Nucleic Acids Research. 25:1854-1858.
Frey B.L, Krusemark C.J, Ledvina A.R, Coon J.J, Belshaw P.J, Smith L.M.  2008.  Ion-ion reactions with fixed-charge modified proteins to produce ions in a single, very high charge state. International Journal of Mass Spectrometry. 276:136-143.
Lu M.C, Knickerbocker T., Cai W., Yang W.S, Hamers R.J, Smith L.M.  2004.  Invasive cleavage reactions on DNA-modified diamond surfaces. Biopolymers. 73:606-613.
Wolford D.J, Gilliland G.D, Kuech T.F, Smith L.M, Martinsen J., Bradley J.A, Tsang C.F, Venkatasubramanian R., Ghandi S.K, Hjalmarson H.P.  1991.  INTRINSIC RECOMBINATION AND INTERFACE CHARACTERIZATION IN SURFACE-FREE GAAS STRUCTURES. Journal of Vacuum Science & Technology B. 9:2369-2376.
Knoener R., Evans E., Becker J.T, Scalf M., Benner B., Sherer N.M, Smith L.M.  2021.  Identification of host proteins differentially associated with HIV-1 RNA splice variants. eLife. 10
Schaffer L.V, Millikin R.J, Miller R.M, Anderson L.C, Fellers R.T, Ge Y., Kelleher N.L, LeDuc R.D, Liu X., Payne S.H et al..  2019.  Identification and Quantification of Proteoforms by Mass Spectrometry. Proteomics.
Spiniello M., Knoener R.A, Steinbrink M.I, Yang B., Cesnik A.J, Buxton K.E, Scalf M., Jarrard D.F, Smith L.M.  2018.  HyPR-MS for multiplexed discovery of MALAT1, NEAT1, and NORAD lncRNA protein interactomes. Journal of Proteome Research. 17(9):3022-3038.
Olson CN, Galloway MM, Yu G, Hedman CJ, Lockett MR, Yoon T.P, Stone EA, Smith L.M, Keutsch F.N.  2011.  Hydroxycarboxylic Acid-Derived Organosulfates: Synthesis, Stability, and Quantification in Ambient Aerosol. Environmental Science & Technology. 45:6468-6474.
Guillen-Ahlers H., Rao P.K, Levenstein M.E, Kennedy-Darling J., Perumalla D.S, Jadhav A.Y, Glenn J.P, Ludwig-Kubinski A., Drigalenko E., Montoya M.J et al..  2016.  HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae. Genomics. 107:267-273.
Aebersold R., Agar J.N, Amster I.J, Baker M.S, Bertozzi C.R, Boja E.S, Costello C.E, Cravatt B.F, Fenselau C., Garcia B.A et al..  2018.  How many human proteoforms are there? Nature Chemical Biology. 14:206-214.
Aebersold R., Agar J.N, Amster I.J, Baker M.S, Bertozzi C.R, Boja E.S, Costello C.E, Cravatt B.F, Fenselau C., Garcia B.A et al..  2018.  How many human proteoforms are there? Nature Chemical Biology. 14:206-214.
Aebersold R., Agar J.N, Amster I.J, Baker M.S, Bertozzi C.R, Boja E.S, Costello C.E, Cravatt B.F, Fenselau C., Garcia B.A et al..  2018.  How many human proteoforms are there? Nature Chemical Biology. 14:206-214.
Drossman H., Luckey J.A, Kostichka A.J, Dcunha J., Smith L.M.  1990.  High-speed separations of DNA sequencing reactions by capillary electrophoresis. Analytical Chemistry. 62:900-903.
Luckey JA, Drossman H, Kostichka T, Smith L.M.  1993.  High-speed DNA sequencing by capillary gel electrophoresis. Methods in Enzymology. 218:154-72.
Kolner DE, Guilfoyle RA, Smith L.M.  1994.  A high throughput system for the preparation of single stranded templates grown in microculture. DNA Sequence. 4:253-7.
Luckey J.A, Drossman H., Kostichka A.J, Mead D.A, Dcunha J., Norris T.B, Smith L.M.  1990.  High speed DNA sequencing by capillary electrophoresis. Nucleic Acids Research. 18:4417-4421.

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