Publications

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Chen Y., Shortreed M.R, Olivier M., Smith L.M.  2005.  Parallel single nucleotide polymorphism genotyping by surface invasive cleavage with universal detection. Analytical Chemistry. 77:2400-2405.
Leduc R.D, Schwammle V., Shortreed M.R, Cesnik A.J, Solntsev S.K, Shaw J.B, Martin M.J, Vizcaino J.A, Alpi E., Danis P. et al..  2018.  ProForma: A Standard Proteoform Notation. Journal of Proteome Research. 17:1321-1325.
Cesnik A.J, Shortreed M.R, Schaffer L.V, Knoener R.A, Frey B.L, Scalf M., Solntsev S.K, Dai Y.X, Gasch A.P, Smith L.M.  2018.  Proteoform Suite: Software for Constructing, Quantifying, and Visualizing Proteoform Families. Journal of Proteome Research. 17:568-578.
Sheynkman G.M, Shortreed M.R, Cesnik A.J, Smith L.M.  2016.  Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation. 9:521-545.
Yau B., Naghiloo S., Diaz-Vegas A., Carr A.V, Van Gerwen J., Needham E.J, Jevon D., Chen S.Y, Hoehn K.L, Brandon A.E et al..  2021.  Proteomic pathways to metabolic disease and type 2 diabetes in the pancreatic islet. Iscience. 24
Proffitt J.M, Glenn J., Cesnik A.J, Jadhav A., Shortreed M.R, Smith L.M, Kavanagh K., Cox L.A, Olivier M..  2017.  Proteomics in non-human primates: utilizing RNA-Seq data to improve protein identification by mass spectrometry in vervet monkeys. Bmc Genomics. 18