Publications

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Journal Article
Hansen S.R, White D.S, Scalf M., Correa I.R, Smith L.M, Hoskins A.A, Staley J.P.  2022.  Multi-step recognition of potential 5' splice sites by the Saccharomyces cerevisiae U1 snRNP. eLife. 11
Gemperline D.C, Scalf M., Smith L.M, Vierstra R.D.  2016.  Morpheus Spectral Counter: A computational tool for label-free quantitative mass spectrometry using the Morpheus search engine. Proteomics. 16:920-924.
Lamos S.M, Krusemark C.J, McGee C.J, Scalf M., Smith L.M, Belshaw P.J.  2006.  Mixed isotope photoaffinity reagents for identification of small-molecule targets by mass spectrometry. Angewandte Chemie-International Edition. 45:4329-4333.
Ladror D.T, Frey B.L, Scalf M., Levenstein M.E, Artymiuk J.M, Smith L.M.  2014.  Methylation of yeast ribosomal protein S2 is elevated during stationary phase growth conditions. Biochemical and Biophysical Research Communications. 445:535-541.
Carr A.V, Frey B.L, Scalf M., Cesnik A.J, Rolfs Z., Pike K.A, Yang B., Keller M.P, Jarrard D.F, Shortreed M.R et al..  2022.  MetaNetwork Enhances Biological Insights from Quantitative Proteomics Differences by Combining Clustering and Enrichment Analyses. Journal of Proteome Research. 21:410-419.
Lu L., Scalf M., Shortreed M.R, Smith L.M.  2021.  Mesh Fragmentation Improves Dissociation Efficiency in Top-down Proteomics. 32:1319-1325.
Aguilar-Hernandez V., Kim D.Y, Stankey R.J, Scalf M., Smith L.M, Vierstra R.D.  2017.  Mass Spectrometric Analyses Reveal a Central Role for Ubiquitylation in Remodeling the Arabidopsis Proteome during Photomorphogenesis. Molecular Plant. 10:846-865.