Publications

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Journal Article
Mead D.A, Pey N.K, Herrnstadt C., Marcil R.A, Smith L.M.  1991.  A universal method for the direct cloning of PCR amplified nucleic acid. Bio/Technology. 9:657-663.
Kolner DE, Mead DA, Smith L.M.  1992.  Ultrathin DNA sequencing gels using microtrough vertical electrophoresis plates. BioTechniques. 13:338-9.
Book A.J, Yang P.Z, Scalf M., Smith L.M, Vierstra R.D.  2005.  Tripeptidyl peptidase II. An oligomeric protease complex from Arabidopsis. Plant Physiology. 138:1046-1057.
Smith L.M, Shortreed MR, Olivier M.  2011.  To understand the whole, you must know the parts: unraveling the roles of protein-DNA interactions in genome regulation. Analyst. 136:3060-3065.
Tulpan D., Andronescu M., Chang S.B, Shortreed M.R, Condon A., Hoos H.H, Smith L.M.  2005.  Thermodynamically based DNA strand design. Nucleic Acids Research. 33:4951-4964.
Shortreed M.R, Chang S.B, Hong D.G, Phillips M., Campion B., Tulpan D.C, Andronescu M., Condon A., Hoos H.H, Smith L.M.  2005.  A thermodynamic approach to designing structure-free combinatorial DNA word sets. Nucleic Acids Research. 33:4965-4977.
Lockett MR, Phillips MF, Jarecki JL, Peelen D, Smith L.M.  2008.  A tetrafluorophenyl activated ester self-assembled monolayer for the immobilization of amine-modified oligonucleotides. Langmuir. 24:69-75.
Saracco S.A, Hansson M., Scalf M., Walker J.M, Smith L.M, Vierstra R.D.  2009.  Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis. Plant Journal. 59:344-358.
Smith L.M, Fung S, Hunkapiller MW, Hunkapiller TJ, Hood LE.  1985.  The synthesis of oligonucleotides containing an aliphatic amino group at the 5' terminus: synthesis of fluorescent DNA primers for use in DNA sequence analysis. Nucleic Acids Research. 13:2399-412.
Smith L.M, Kaiser RJ, Sanders JZ, Hood LE.  1987.  The synthesis and use of fluorescent oligonucleotides in DNA sequence analysis. Methods in Enzymology. 155:260-301.
Strother T., Cai W., Zhao X.S, Hamers R.J, Smith L.M.  2000.  Synthesis and characterization of DNA-modified silicon (111) surfaces. Journal of the American Chemical Society. 122:1205-1209.
Wang L., Liu Q., Frutos A.G, Gillmor S.D, Thiel A.J, Strother T.C, Condon A.E, Corn R.M, Lagally M.G, Smith L.M.  1999.  Surface-based DNA computing operations: DESTROY and READOUT. Biosystems. 52:189-191.
Smith L.M, Corn R.M, Condon A.E, Lagally M.G, Frutos A.G, Liu Q.H, Thiel A.J.  1998.  A surface-based approach to DNA computation. Journal of Computational Biology. 5:255-267.
Lu M.C, Shortreed M.R, Hall J.G, Wang L.M, Berggren T., Stevens P.W, Kelso D.M, Lyamichev V., Neri B., Smith L.M.  2002.  A surface invasive cleavage assay for highly parallel SNP analysis. Human Mutation. 19:416-422.
Chen Y., Shortreed M.R, Peelen D., Lu M.C, Smith L.M.  2004.  Surface amplification of invasive cleavage products. Journal of the American Chemical Society. 126:3016-3017.
Qin H., Kim H.S, Blick R.H, Westphall M.S, Smith L.M.  2007.  Subthreshold field emission from thin silicon membranes. Applied Physics Letters. 91
Lu M.C, Hall J.G, Shortreed M.R, Wang L.M, Berggren W.T, Stevens P.W, Kelso D.M, Lyamichev V., Neri B., Skinner J.L et al..  2002.  Structure-specific DNA cleavage on surfaces. Journal of the American Chemical Society. 124:7924-7931.
Collins F.S, Benjamin L.J, Botstein D., Cox J.R, Davidson N., Gray J.W, Holtzman N., Housman D.E, Jamison K.R, Nelkin D. et al..  1994.  Statement on use of DNA testing for presymptomatic identification of cancer risk. JAMA. 271:785-785.
Chen X., Fei Z.D, Smith L.M, Bradbury E.M, Majidi V..  1999.  Stable-isotope-assisted MALDI-TOF mass spectrometry for accurate determination of nucleotide compositions of PCR products. Analytical Chemistry. 71:3118-3125.
Peelen D., Kodoyianni V., Lee J., Zheng T., Shortreed M.R, Smith L.M.  2006.  Specific capture of mammalian cells by cell surface receptor binding to ligand immobilized on gold thin films. Journal of Proteome Research. 5:1580-1585.
Tong X.C, Smith L.M.  1992.  Solid-phase method for the purification of DNA sequencing reactions. Analytical Chemistry. 64:2672-2677.
Tong X, Smith L.M.  1993.  Solid phase purification in automated DNA sequencing. DNA Sequence. 4:151-62.
Giddings M.C, Severin J., Westphall M., Wu J.Z, Smith L.M.  1998.  A software system for data analysis in automated DNA sequencing. Genome Research. 8:644-665.

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