Publications

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Journal Article
Sturm R., Sheynkman G., Booth C., Smith L.M, Pedersen J.A, Li L.J.  2012.  Absolute Quantification of Prion Protein (90-231) Using Stable Isotope-Labeled Chymotryptic Peptide Standards in a LC-MRM AQUA Workflow. Journal of the American Society for Mass Spectrometry. 23:1522-1533.
Giddings MC, Brumley, Jr. RL, Haker M, Smith L.M.  1993.  An adaptive, object oriented strategy for base calling in DNA sequence analysis. Nucleic Acids Research. 21:4530-40.
Book AJ, Gladman NP, Lee S-S, Scalf M, Smith L.M, Vierstra RD.  2010.  Affinity Purification of the Arabidopsis 26 S Proteasome Reveals a Diverse Array of Plant Proteolytic Complexes. Journal of Biological Chemistry. 285:25554-25569.
Connell C., Fung S., Heiner C., Bridgham J., Chakerian V., Heron E., Jones B., Menchen S., Mordan W., Raff M. et al..  1987.  Automated DNA-Sequence Analysis. BioTechniques. 5:342-&.
D'Cunha J., Berson B.J, Brumley, Jr. R.L, Wagner P.R, Smith L.M.  1990.  An automated instrument for the performance of enzymatic DNA sequencing reactions. BioTechniques. 9:80-5,88-90.
D'Cunha J., Berson B.J, Brumley, Jr. R.L, Wagner P.R, Smith L.M.  1990.  An automated instrument for the performance of enzymatic DNA sequencing reactions. BioTechniques. 9:80-5,88-90.
Buxton E.C, Westphall M., Jacobson W., Tong X.C, Smith L.M.  1996.  Automation in large-scale DNA sequencing. Laboratory Robotics and Automation. 8:339-349.
Ling C.Y, Li Q.Y, Brown M.E, Kishimoto Y., Toya Y., Devine E.E, Choi K.O, Nishimoto K., Norman I.G, Tsegyal T. et al..  2015.  Bioengineered vocal fold mucosa for voice restoration. Science Translational Medicine. 7
Ling C.Y, Li Q.Y, Brown M.E, Kishimoto Y., Toya Y., Devine E.E, Choi K.O, Nishimoto K., Norman I.G, Tsegyal T. et al..  2015.  Bioengineered vocal fold mucosa for voice restoration. Science Translational Medicine. 7
Russell J.D, Scalf M., Book A.J, Ladror D.T, Vierstra R.D, Smith L.M, Coon J.J.  2013.  Characterization and Quantification of Intact 26S Proteasome Proteins by Real-Time Measurement of Intrinsic Fluorescence Prior to Top-down Mass Spectrometry. Plos One. 8
Brow M.AD, Oldenburg M.C, Lyamichev V., Heisler L.M, Grotelueschen J., Lyamicheva N., Kozyavkin S., Fors L., Dahlberg J.E, Smith L.M et al..  1996.  The Cleavase Fragment Length Polymorphism (CFLP) assay. Biochemica. 1:14-15.
Zaidan N.Z, Walker K.J, Brown J.E, Schaffer L.V, Scalf M., Shortreed M.R, Iyer G., Smith L.M, Sridharan R..  2018.  Compartmentalization of HP1 Proteins in Pluripotency Acquisition and Maintenance. Stem Cell Reports. 10:627-641.
Dai Y., Buxton K.E, Schaffer L.V, Miller R.M, Millikin R.J, Scalf M., Frey B.L, Shortreed M.R, Smith L.M.  2019.  Constructing Human Proteoform Families Using Intact-Mass and Top-Down Proteomics with a Multi-Protease Global Post-Translational Modification Discovery Database. Journal of Proteome Research. 18(10)
Schaffer L.V, Anderson L.C, Butcher D.S, Shortreed M.R, Miller R.M, Pavelec C., Smith L.M.  2021.  Construction of Human Proteoform Families from 21 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Top-Down Proteomic Data. Journal of Proteome Research. 20:317-325.
Baker SE, Lasseter TL, Smith L.M, Hamers R.J.  2002.  Covalently-linked adducts of single-walled nanotubes with biomolecules: Synthesis, hybridization, and biologically-directed surface assembly. Materials Research Society Symposium Proceedings. 737
Brow M.AD, Oldenburg M.C, Lyamichev V., Heisler L.M, Lyamicheva N., Hall J.G, Eagan N.J, Olive D.M, Smith L.M, Fors L. et al..  1996.  Differentiation of bacterial 16S rRNA genes and intergenic regions and Mycobacterium tuberculosis katG genes by structure-specific endonuclease cleavage. Journal of Clinical Microbiology. 34:3129-3137.
Miller R.M, Knoener R.A, Benner B.E, Frey B.L, Scalf M., Shortreed M.R, Sherer N.M, Smith L.M.  2022.  Discovery of Dehydroamino Acid Residues in the Capsid and Matrix Structural Proteins of HIV-1 br. Journal of Proteome Research. 21:993-1001.
Knickerbocker T., Strother T., Schwartz M.P, Russell J.N, Butler J., Smith L.M, Hamers R.J.  2003.  DNA-modified diamond surfaces. Langmuir. 19:1938-1942.
Yang W.S, Auciello O., Butler J.E, Cai W., Carlisle J.A, Gerbi J., Gruen D.M, Knickerbocker T., Lasseter T.L, Russell J.N et al..  2002.  DNA-modified nanocrystalline diamond thin-films as stable, biologically active substrates. Nature Materials. 1:253-257.
Yang Z., Qian S., Scheid R.N, Lu L., Chen X., Liu R., Du X., Lv X., Boersma M.D, Scalf M. et al..  2018.  EBS is a bivalent histone reader that regulates floral phase transition in Arabidopsis. Nature genetics. 50(9)
Buxton K.E, Kennedy-Darling J., Shortreed M.R, Zaidan N.Z, Olivier M., Scalf M., Sridharan R., Smith L.M.  2017.  Elucidating Protein-DNA Interactions in Human Alphoid Chromatin via Hybridization Capture and Mass Spectrometry. Journal of Proteome Research. 16:3433-3442.
Knoener R.A, Becker J.T, Scalf M., Sherer N.M, Smith L.M.  2017.  Elucidating the in vivo interactome of HIV-1 RNA by hybridization capture and mass spectrometry. Scientific Reports. 7

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