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C

Chen X., Fei Z.D, Smith L.M, Bradbury E.M, Majidi V.. 1999. Stable-isotope-assisted MALDI-TOF mass spectrometry for accurate determination of nucleotide compositions of PCR products. Analytical Chemistry. 71:3118-3125.

Chen X.Y, Westphall M.S, Smith L.M. 2003. Mass spectrometric analysis of DNA mixtures: Instrumental effects responsible for decreased sensitivity with increasing mass. Analytical Chemistry. 75:5944-5952.

Chen Y., Shortreed M.R, Peelen D., Lu M.C, Smith L.M. 2004. Surface amplification of invasive cleavage products. Journal of the American Chemical Society. 126:3016-3017.

Chen D.H, Johnson A.F, Severin J.M, Rank D.R, Smith L.M, Guilfoyle R.A. 1996. M13-102: A vector for facilitating construction and improving quality of M13 shotgun libraries. Gene. 172:53-57.

Chen X.S, Lu L., Qian S.M, Scalf M., Smith L.M, Zhong X.H. 2018. Canonical and Noncanonical Actions of Arabidopsis Histone Deacetylases in Ribosomal RNA Processing. Plant Cell. 30:134-152.

Chen Y., Shortreed M.R, Olivier M., Smith L.M. 2005. Parallel single nucleotide polymorphism genotyping by surface invasive cleavage with universal detection. Analytical Chemistry. 77:2400-2405.

Chen D.H, Peterson M.D, Brumley R.L, Giddings M.C, Buxton E.C, Westphall M., Smith L.M. 1995. Side Excitation of Fluorescence in Ultrathin Slab Gel Electrophoresis. Analytical Chemistry. 67:3405-3411.

Chen S.Y, Smith L.M. 2009. Photopatterned Thiol Surfaces for Biomolecule Immobilization. Langmuir. 25:12275-12282.

Chen S., Phillips M.F, Cerrina F., Smith L.M. 2009. Controlling Oligonucleotide Surface Density in Light-Directed DNA Array Fabrication. Langmuir. 25:6570-6575.

Chen S.Y, Zheng T., Shortreed M.R, Alexander C., Smith L.M. 2007. Analysis of cell surface carbohydrate expression patterns in normal and tumorigenic human breast cell lines using lectin arrays. Analytical Chemistry. 79:5698-5702.

Collins F.S, Benjamin L.J, Botstein D., Cox J.R, Davidson N., Gray J.W, Holtzman N., Housman D.E, Jamison K.R, Nelkin D. et al.. 1994. Statement on use of DNA testing for presymptomatic identification of cancer risk. JAMA. 271:785-785.

Connell C., Fung S., Heiner C., Bridgham J., Chakerian V., Heron E., Jones B., Menchen S., Mordan W., Raff M. et al.. 1987. Automated DNA-Sequence Analysis. BioTechniques. 5:342-&.

D

D'Cunha J., Berson B.J, Brumley, Jr. R.L, Wagner P.R, Smith L.M. 1990. An automated instrument for the performance of enzymatic DNA sequencing reactions. BioTechniques. 9:80-5,88-90.

Dai Y, Kennedy-Darling J, Shortreed MR, Scalf M, Gasch AP, Smith L.M. 2017. Multiplexed Sequence-Specific Capture of Chromatin and Mass Spectrometric Discovery of Associated Proteins. Analytical Chemistry. 89:7841-7846.

Dai Y., Buxton K.E, Schaffer L.V, Miller R.M, Millikin R.J, Scalf M., Frey B.L, Shortreed M.R, Smith L.M. 2019. Constructing Human Proteoform Families Using Intact-Mass and Top-Down Proteomics with a Multi-Protease Global Post-Translational Modification Discovery Database. Journal of Proteome Research. 18(10)

Dai Y.X, Shortreed M.R, Scalf M., Frey B.L, Cesnik A.J, Solntsev S., Schaffer L.V, Smith L.M. 2017. Elucidating Escherichia coil Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database. Journal of Proteome Research. 16:4156-4165.

Dai Y.L, Millikin R.J, Rolfs Z., Shortreed M.R, Smith L.M. 2022. A Hybrid Spectral Library and Protein Sequence Database Search Strategy for Bottom-Up and Top-Down Proteomic Data Analysis. Journal of Proteome Research. 21:2609-2618.

Denton D.D, Thiel A.J, Smith L.M, Bajikar S., White V., Ghodssi R., Fish G., McCaughan L.. 1994. Fabrication of microstructures for use in biological and optical applications. Proceedings - Electrochemical Society. 94-14:103-14.

Donnelly D.P, Rawlins C.M, DeHart C.J, Fornelli L, Schachner L.F, Lin Z, Lippens J.L, Aluri K.C, Sarin R, Chen B et al.. 2019. Best practices and benchmarks for intact protein analysis for top-down mass spectrometry. Nature methods. 16(7)

Drossman H., Luckey J.A, Kostichka A.J, Dcunha J., Smith L.M. 1990. High-speed separations of DNA sequencing reactions by capillary electrophoresis. Analytical Chemistry. 62:900-903.

E

Ebeling D.D, Westphall M.S, Scalf M., Smith L.M. 2001. A cylindrical capacitor ionization source: droplet generation and controlled charge reduction for mass spectrometry. Rapid Communications in Mass Spectrometry. 15:401-5.

Ebeling D.D, Westphall M.S, Scalf M., Smith L.M. 2000. Corona discharge in charge reduction electrospray mass spectrometry. Analytical Chemistry. 72:5158-5161.

F

Fei Z.D, Ono T., Smith L.M. 1998. MALDI-TOF mass spectrometric typing of single nucleotide polymorphisms with mass-tagged ddNTPs. Nucleic Acids Research. 26:2827-2828.

Fei Z.D, Smith L.M. 2000. Analysis of single nucleotide polymorphisms by primer extension and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Communications in Mass Spectrometry. 14:950-959.

Fitzgerald M.C, Skowron P., Vanetten J.L, Smith L.M, Mead D.A. 1992. Rapid shotgun cloning utilizing the two base recognition endonuclease CviJI. Nucleic Acids Research. 20:3753-3762.

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