%0 Journal Article %J Journal of Proteome Research %D 2017 %T Elucidating Protein-DNA Interactions in Human Alphoid Chromatin via Hybridization Capture and Mass Spectrometry %A Buxton, K. E. %A Kennedy-Darling, J. %A Shortreed, M. R. %A Zaidan, N. Z. %A Olivier, M. %A Scalf, M. %A Sridharan, R. %A Smith, L. M. %B Journal of Proteome Research %V 16 %P 3433-3442 %8 Sep %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.7b00448 %0 Journal Article %J Bmc Genomics %D 2017 %T Proteomics in non-human primates: utilizing RNA-Seq data to improve protein identification by mass spectrometry in vervet monkeys %A Proffitt, J. M. %A Glenn, J. %A Cesnik, A. J. %A Jadhav, A. %A Shortreed, M. R. %A Smith, L. M. %A Kavanagh, K. %A Cox, L. A. %A Olivier, M. %B Bmc Genomics %V 18 %8 Nov %@ 1471-2164 %G eng %] 877 %R 10.1186/s12864-017-4279-0 %0 Journal Article %J Genomics %D 2016 %T HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae %A Guillen-Ahlers, H. %A Rao, P. K. %A Levenstein, M. E. %A Kennedy-Darling, J. %A Perumalla, D. S. %A Jadhav, A. Y. %A Glenn, J. P. %A Ludwig-Kubinski, A. %A Drigalenko, E. %A Montoya, M. J. %A Goring, H. H. %A Anderson, C. D. %A Scalf, M. %A Gildersleeve, H. I. %A Cole, R. %A Greene, A. M. %A Oduro, A. K. %A Lazarova, K. %A Cesnik, A. J. %A Barfknecht, J. %A Cirillo, L. A. %A Gasch, A. P. %A Shortreed, M. R. %A Smith, L. M. %A Olivier, M. %B Genomics %V 107 %P 267-273 %G eng %0 Journal Article %J Physiological Genomics %D 2014 %T Advanced methods for the analysis of chromatin-associated proteins %A Guillen-Ahlers, H. %A Shortreed, M. R. %A L. M. Smith %A Olivier, M. %B Physiological Genomics %V 46 %P 441-447 %8 Jul %@ 1094-8341 %G eng %2 PMC4080278 %R 10.1152/physiolgenomics.00041.2014 %0 Journal Article %J Journal of Proteome Research %D 2014 %T Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae %A Kennedy-Darling, J. %A Guillen-Ahlers, H. %A Shortreed, M. R. %A Scalf, M. %A Frey, B. L. %A Kendziorski, C. %A Olivier, M. %A Gasch, A. P. %A L. M. Smith %B Journal of Proteome Research %V 13 %P 3810-3825 %8 Aug %@ 1535-3893 %G eng %2 PMC4123949 %R 10.1021/pr5004938 %0 Journal Article %J Plos One %D 2011 %T Sequence-Specific Capture of Protein-DNA Complexes for Mass Spectrometric Protein Identification %A Wu, C. H. %A Chen, S. Y. %A Shortreed, M. R. %A Kreitinger, G. M. %A Yuan, Y. %A Frey, B. L. %A Zhang, Y. %A Mirza, S. %A Cirillo, L. A. %A Olivier, M. %A L. M. Smith %B Plos One %V 6 %8 Oct %@ 1932-6203 %G eng %2 PMC3197616 %] e26217 %R 10.1371/journal.pone.0026217 %0 Journal Article %J Analytical Chemistry %D 2008 %T Identification of Cell Surface Markers to Differentiate Rat Endothelial and Fibroblast Cells Using Lectin Arrays and LC-ESI-MS/MS %A Lee, J. E. %A Mirza, S. P. %A Didier, D. N. %A Scalf, M. %A Olivier, M. %A Greene, A. S. %A L. M. Smith %B Analytical Chemistry %V 80 %P 8269-8275 %8 Nov %G eng %2 PMC2950091 %R 10.1021/ac801390b %F ISI 2008 11 27 %0 Journal Article %J Analytical Chemistry %D 2005 %T Parallel single nucleotide polymorphism genotyping by surface invasive cleavage with universal detection %A Chen, Y. %A Shortreed, M. R. %A Olivier, M. %A L. M. Smith %B Analytical Chemistry %V 77 %P 2400-2405 %8 Apr 15 %G eng %R 10.1021/ac0483825 %F ISI 2005 week 20