%0 Journal Article %J Journal of Proteome Research %D 2016 %T Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements %A Shortreed, M. R. %A Frey, B. L. %A Scalf, M. %A Knoener, R. A. %A Cesnik, A. J. %A L. M. Smith %B Journal of Proteome Research %V 15 %P 1213-1221 %8 Apr %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.5b01090 %0 Journal Article %J Biomaterials %D 2016 %T Protein turnover during in vitro tissue engineering %A Li, Q. Y. %A Chang, Z. %A Oliveira, G. %A Xiong, M. %A L. M. Smith %A Frey, B. L. %A Welham, N. V. %B Biomaterials %V 81 %P 104-113 %8 Mar %@ 0142-9612 %G eng %R 10.1016/j.biomaterials.2015.12.004 %0 Journal Article %J Biomaterials %D 2016 %T Proteomic analysis of naturally-sourced biological scaffolds %A Li, Q. Y. %A Uygun, B. E. %A Geerts, S. %A Ozer, S. %A Scalf, M. %A Gilpin, S. E. %A Ott, H. C. %A Yarmush, M. L. %A L. M. Smith %A Welham, N. V. %A Frey, B. L. %B Biomaterials %V 75 %P 37-46 %8 Jan %@ 0142-9612 %G eng %] Ber s, 1995, journal of cell biology, v131, p1083 %R 10.1016/j.biomaterials.2015.10.011 %0 Journal Article %J Science Translational Medicine %D 2015 %T Bioengineered vocal fold mucosa for voice restoration %A Ling, C. Y. %A Li, Q. Y. %A Brown, M. E. %A Kishimoto, Y. %A Toya, Y. %A Devine, E. E. %A Choi, K. O. %A Nishimoto, K. %A Norman, I. G. %A Tsegyal, T. %A Jiang, J. J. %A Burlingham, W. J. %A Gunasekaran, S. %A L. M. Smith %A Frey, B. L. %A Welham, N. V. %B Science Translational Medicine %V 7 %8 Nov %@ 1946-6234 %G eng %] 314ra187 %R 10.1126/scitranslmed.aab4014 %0 Journal Article %J Annu. Rev. Anal. Chem. %D 2015 %T Carbon Substrates: A Stable Foundation for Biomolecular Arrays %A Lockett, Matthew R. %A L. M. Smith %B Annu. Rev. Anal. Chem. %V 8 %P 263-285 %@ 1936-1327 %G eng %R 10.1146/annurev-anchem-071114-040146 %0 Journal Article %J Journal of Biological Chemistry %D 2015 %T Formaldehyde Crosslinking: A Tool for the Study of Chromatin Complexes %A Hoffman, E. A. %A Frey, B. L. %A L. M. Smith %A Auble, D. T. %B Journal of Biological Chemistry %V 290 %P 26404-26411 %8 Oct %@ 0021-9258 %G eng %R 10.1074/jbc.R115.651679 %0 Journal Article %J Journal of Proteome Research %D 2015 %T Global Identification of Protein Post-translational Modifications in a Single-Pass Database Search %A Shortreed, M. R. %A Wenger, C. D. %A Frey, B. L. %A Sheynkman, G. M. %A Scalf, M. %A Keller, M. P. %A Attie, A. D. %A L. M. Smith %B Journal of Proteome Research %V 14 %P 4714-4720 %8 Nov %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.5b00599 %0 Journal Article %J Analytical Chemistry %D 2015 %T Photolithographic Synthesis of High-Density DNA and RNA Arrays on Flexible, Transparent, and Easily Subdivided Plastic Substrates %A Holden, M. T. %A Carter, M. C. D. %A Wu, C. H. %A Wolfer, J. %A Codner, E. %A Sussman, M. R. %A Lynn, D. M. %A L. M. Smith %B Analytical Chemistry %V 87 %P 11420-11428 %8 Nov %@ 0003-2700 %G eng %R 10.1021/acs.analchem.5b02893 %0 Journal Article %J Physiological Genomics %D 2014 %T Advanced methods for the analysis of chromatin-associated proteins %A Guillen-Ahlers, H. %A Shortreed, M. R. %A L. M. Smith %A Olivier, M. %B Physiological Genomics %V 46 %P 441-447 %8 Jul %@ 1094-8341 %G eng %2 PMC4080278 %R 10.1152/physiolgenomics.00041.2014 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2014 %T Detection of Large Ions in Time-of-Flight Mass Spectrometry: Effects of Ion Mass and Acceleration Voltage on Microchannel Plate Detector Response %A Liu, R. R. %A Li, Q. Y. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 25 %P 1374-1383 %8 Aug %@ 1044-0305 %G eng %2 PMC4108536 %R 10.1007/s13361-014-0903-2 %0 Journal Article %J Journal of Proteome Research %D 2014 %T Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae %A Kennedy-Darling, J. %A Guillen-Ahlers, H. %A Shortreed, M. R. %A Scalf, M. %A Frey, B. L. %A Kendziorski, C. %A Olivier, M. %A Gasch, A. P. %A L. M. Smith %B Journal of Proteome Research %V 13 %P 3810-3825 %8 Aug %@ 1535-3893 %G eng %2 PMC4123949 %R 10.1021/pr5004938 %0 Journal Article %J Journal of Proteome Research %D 2014 %T Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework %A Jagtap, P. D. %A Johnson, J. E. %A Onsongo, G. %A Sadler, F. W. %A Murray, K. %A Wang, Y. B. %A Shenykrnan, G. M. %A Bandhakavi, S. %A L. M. Smith %A Griffin, T. J. %B Journal of Proteome Research %V 13 %P 5898-5908 %8 Dec %@ 1535-3893 %G English %9 Article %R 10.1021/pr500812t %0 Journal Article %J Journal of Proteome Research %D 2014 %T Large-Scale Mass Spectrometric Detection of Variant Peptides Resulting from Nonsynonymous Nucleotide Differences %A Sheynkman, Gloria M. %A Shortreed, Michael R. %A Frey, Brian L. %A Scalf, Mark %A L. M. Smith %B Journal of Proteome Research %V 13 %P 228-240 %@ 1535-3893 %G English %R 10.1021/pr4009207 %0 Journal Article %J Analytical Chemistry %D 2014 %T Measuring the Formaldehyde Protein-DNA Cross-Link Reversal Rate %A Kennedy-Darling, Julia %A L. M. Smith %B Analytical Chemistry %V 86 %P 5678-5681 %@ 0003-2700 %G English %R 10.1021/ac501354y %0 Journal Article %J Biochemical and Biophysical Research Communications %D 2014 %T Methylation of yeast ribosomal protein S2 is elevated during stationary phase growth conditions %A Ladror, D. T. %A Frey, B. L. %A Scalf, M. %A Levenstein, M. E. %A Artymiuk, J. M. %A L. M. Smith %B Biochemical and Biophysical Research Communications %V 445 %P 535-541 %8 Mar %@ 0006-291X %G English %9 Article %R 10.1016/j.bbrc.2014.01.040 %0 Journal Article %J Chembiochem %D 2014 %T Multiplexed Programmable Release of Captured DNA %A Kennedy-Darling, J. %A Holden, M. T. %A Shortreed, M. R. %A L. M. Smith %B Chembiochem %V 15 %P 2353-2356 %8 Nov %@ 1439-4227 %G English %9 Article %R 10.1002/cbic.201402343 %0 Journal Article %J Analytical Chemistry %D 2014 %T Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics %A Rhoads, T. W. %A Rose, C. M. %A Bailey, D. J. %A Riley, N. M. %A Molden, R. C. %A Nestler, A. J. %A Merrill, A. E. %A L. M. Smith %A Hebert, A. S. %A Westphall, M. S. %A Pagliarini, D. J. %A Garcia, B. A. %A Coon, J. J. %B Analytical Chemistry %V 86 %P 2314-2319 %8 Mar %@ 0003-2700 %G English %9 Article %R 10.1021/ac403579s %0 Journal Article %J Plant Cell %D 2013 %T Advanced Proteomic Analyses Yield a Deep Catalog of Ubiquitylation Targets in Arabidopsis %A Kim, D. Y. %A Scalf, M. %A L. M. Smith %A Vierstra, R. D. %B Plant Cell %V 25 %P 1523-1540 %8 May %@ 1040-4651 %G English %9 Article %2 PMC3694690 %R 10.1105/tpc.112.108613 %0 Journal Article %J Plos One %D 2013 %T Characterization and Quantification of Intact 26S Proteasome Proteins by Real-Time Measurement of Intrinsic Fluorescence Prior to Top-down Mass Spectrometry %A Russell, J. D. %A Scalf, M. %A Book, A. J. %A Ladror, D. T. %A Vierstra, R. D. %A L. M. Smith %A Coon, J. J. %B Plos One %V 8 %8 Mar %@ 1932-6203 %G eng %2 PMC3594244 %] e58157 %R 10.1371/journal.pone.0058157 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2013 %T Chemical Derivatization of Peptide Carboxyl Groups for Highly Efficient Electron Transfer Dissociation %A Frey, B. L. %A Ladror, D. T. %A Sondalle, S. B. %A Krusemark, C. J. %A Jue, A. L. %A Coon, J. J. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 24 %P 1710-1721 %8 Nov %@ 1044-0305 %G English %9 Article %2 PMC3827969 %R 10.1007/s13361-013-0701-2 %0 Journal Article %J Molecular & Cellular Proteomics %D 2013 %T Discovery and Mass Spectrometric Analysis of Novel Splice-junction Peptides Using RNA-Seq %A Sheynkman, G. M. %A Shortreed, M. R. %A Frey, B. L. %A L. M. Smith %B Molecular & Cellular Proteomics %V 12 %P 2341-2353 %8 Aug %@ 1535-9476 %G English %9 Article %R 10.1074/mcp.O113.028142 %0 Journal Article %J ACS Applied Materials & Interfaces %D 2013 %T Fabrication of Oligonucleotide and Protein Arrays on Rigid and Flexible Substrates Coated with Reactive Polymer Multilayers %A Broderick, A. H. %A Carter, M. C. D. %A Lockett, M. R. %A L. M. Smith %A Lynn, D. M. %B ACS Applied Materials & Interfaces %V 5 %P 351-359 %8 Jan %@ 1944-8244 %G eng %2 PMC3553252 %R 10.1021/am302285n %0 Journal Article %J Molecules %D 2013 %T Multiplexed Analysis of Cage and Cage Free Chicken Egg Fatty Acids Using Stable Isotope Labeling and Mass Spectrometry %A Torde, R. G. %A Therrien, A. J. %A Shortreed, M. R. %A L. M. Smith %A Lamos, S. M. %B Molecules %V 18 %P 14977-14988 %8 Dec %@ 1420-3049 %G English %9 Article %R 10.3390/molecules181214977 %0 Journal Article %J Nature Methods %D 2013 %T Proteoform: a single term describing protein complexity %A L. M. Smith %A Kelleher, N. L. %A Ge, Y. %A Consortium Top Down, Proteomics %B Nature Methods %V 10 %P 186-187 %8 Mar %@ 1548-7091 %G eng %R 10.1038/nmeth.2369 %0 Journal Article %J Biomaterials %D 2013 %T Proteomic analysis of a decellularized human vocal fold mucosa scaffold using 2D electrophoresis and high-resolution mass spectrometry %A Welham, N. V. %A Chang, Z. %A L. M. Smith %A Frey, B. L. %B Biomaterials %V 34 %P 669-676 %8 Jan %@ 0142-9612 %G eng %2 PMC3496020 %R 10.1016/j.biomaterials.2012.09.050 %0 Journal Article %J Molecular & Cellular Proteomics %D 2013 %T Quantitative Proteomics Reveals Factors Regulating RNA Biology as Dynamic Targets of Stress-induced SUMOylation in Arabidopsis %A Miller, M. J. %A Scalf, M. %A Rytz, T. C. %A Hubler, S. L. %A L. M. Smith %A Vierstra, R. D. %B Molecular & Cellular Proteomics %V 12 %P 449-463 %8 Feb %@ 1535-9476 %G eng %2 PMC3567865 %R 10.1074/mcp.M112.025056 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2012 %T Absolute Quantification of Prion Protein (90-231) Using Stable Isotope-Labeled Chymotryptic Peptide Standards in a LC-MRM AQUA Workflow %A Sturm, R. %A Sheynkman, G. %A Booth, C. %A L. M. Smith %A Pedersen, J. A. %A Li, L. J. %B Journal of the American Society for Mass Spectrometry %V 23 %P 1522-1533 %8 Sep %@ 1044-0305 %G eng %2 PMC3579656 %R 10.1007/s13361-012-0411-1 %0 Journal Article %J Chemistry of Materials %D 2012 %T In situ Synthesis of Oligonucleotide Arrays on Surfaces Coated with Crosslinked Polymer Multilayers %A Broderick, A. H. %A Lockett, M. R. %A Buck, M. E. %A Yuan, Y. %A L. M. Smith %A Lynn, D. M. %B Chemistry of Materials %V 24 %P 938-945 %8 Mar %@ 0897-4756 %G English %9 Article %2 PMC3352262 %R 10.1021/cm202720q %0 Journal Article %J Angewandte Chemie-International Edition %D 2012 %T RNA-Mediated Gene Assembly from DNA Arrays %A Wu, C. H. %A Lockett, M. R. %A L. M. Smith %B Angewandte Chemie-International Edition %V 51 %P 4628-4632 %@ 1433-7851 %G English %9 Article %2 PMC3422211 %R 10.1002/anie.201109058 %0 Book Section %D 2011 %T Complete Chemical Modification of Amine and Acid Functional Groups of Peptides and Small Proteins %A Krusemark, Casey J. %A Frey, Brian L. %A L. M. Smith %A Belshaw, Peter J. %E Gevaert, K. %E Vandekerckhove, J. %S Methods in Molecular Biology %V 753 %P 77-91 %@ 1064-3745
978-1-61779-147-5 %G eng %R 10.1007/978-1-61779-148-2_6 %0 Journal Article %J Journal of Proteome Research %D 2011 %T Discovery of Neuropeptides in the Nematode Ascaris suum by Database Mining and Tandem Mass Spectrometry %A Jarecki, Jessica L. %A Frey, Brian L. %A L. M. Smith %A Stretton, Antony O. %B Journal of Proteome Research %V 10 %P 3098-3106 %8 Jul %G eng %2 PMC3128658 %R 10.1021/pr2001176 %F ISI 2011 07 21 %0 Journal Article %J Environmental Science & Technology %D 2011 %T Hydroxycarboxylic Acid-Derived Organosulfates: Synthesis, Stability, and Quantification in Ambient Aerosol %A Olson, Corey N. %A Galloway, Melissa M. %A Yu, Ge %A Hedman, Curtis J. %A Lockett, Matthew R. %A Yoon, T. P. %A Stone, Elizabeth A. %A L. M. Smith %A Keutsch, F. N. %B Environmental Science & Technology %V 45 %P 6468-6474 %8 Aug %G eng %R 10.1021/es201039p %F ISI 2011 08 10 %0 Journal Article %J Nano Letters %D 2011 %T A Mechanical Nanomembrane Detector for Time-of-Flight Mass Spectrometry %A Park, Jonghoo %A Qin, Hua %A Scalf, Mark %A Hilger, Ryan T. %A Westphall, Michael S. %A L. M. Smith %A Blick, Robert H. %B Nano Letters %V 11 %P 3681-3684 %8 Sep %G eng %R 10.1021/nl201645u %F ISI 2011 10 20 %0 Journal Article %J Analytical Chemistry %D 2011 %T Parallel Detection of Intrinsic Fluorescence from Peptides and Proteins for Quantification during Mass Spectrometric Analysis %A Russell, Jason D. %A Hilger, Ryan T. %A Ladror, Daniel T. %A Tervo, Mark A. %A Scalf, Mark %A Shortreed, Michael R. %A Coon, J. J. %A L. M. Smith %B Analytical Chemistry %V 83 %P 2187-2193 %8 Mar %G eng %2 PMC3056920 %R 10.1021/ac103023q %F ISI 2011 03 25 %0 Journal Article %J Journal of Proteomics %D 2011 %T Quantitative proteomic analysis of the chemolithoautotrophic bacterium Nitrosomonas europaea: Comparison of growing- and energy-starved cells %A Pellitteri-Hahn, M. C. %A Halligan, B. D. %A Scalf, M. %A L. M. Smith %A Hickey, W. J. %B Journal of Proteomics %V 74 %P 411-419 %8 Apr %@ 1874-3919 %G eng %R 10.1016/j.jprot.2010.12.003 %0 Journal Article %J Plos One %D 2011 %T Sequence-Specific Capture of Protein-DNA Complexes for Mass Spectrometric Protein Identification %A Wu, C. H. %A Chen, S. Y. %A Shortreed, M. R. %A Kreitinger, G. M. %A Yuan, Y. %A Frey, B. L. %A Zhang, Y. %A Mirza, S. %A Cirillo, L. A. %A Olivier, M. %A L. M. Smith %B Plos One %V 6 %8 Oct %@ 1932-6203 %G eng %2 PMC3197616 %] e26217 %R 10.1371/journal.pone.0026217 %0 Journal Article %J Molecular Cell %D 2011 %T Sirt3 Promotes the Urea Cycle and Fatty Acid Oxidation during Dietary Restriction %A Hallows, William C. %A Yu, Wei %A Smith, Brian C. %A Devires, Mark K. %A Ellinger, James J. %A Someya, Shinichi %A Shortreed, Michael R. %A Prolla, Tomas %A Markley, John L. %A L. M. Smith %A Zhao, Shimin %A Guan, Kun-Liang %A Denu, John M. %B Molecular Cell %V 41 %P 139-149 %8 Jan %G eng %2 PMC3101115 %R 10.1016/j.molcel.2011.01.002 %F ISI 2011 03 18 %0 Journal Article %J Analyst %D 2011 %T To understand the whole, you must know the parts: unraveling the roles of protein-DNA interactions in genome regulation %A L. M. Smith %A Shortreed, Michael R. %A Olivier, Michael %B Analyst %V 136 %P 3060-3065 %G eng %2 PMC3672230 %R 10.1039/c1an15037e %F ISI 2011 08 03 %0 Journal Article %J Journal of Biological Chemistry %D 2010 %T Affinity Purification of the Arabidopsis 26 S Proteasome Reveals a Diverse Array of Plant Proteolytic Complexes %A Book, Adam J. %A Gladman, Nicholas P. %A Lee, Sang-Sook %A Scalf, Mark %A L. M. Smith %A Vierstra, Richard D. %B Journal of Biological Chemistry %V 285 %P 25554-25569 %8 Aug %G eng %2 PMC2919120 %R 10.1074/jbc.M110.136622 %F ISI 2010 12 31 %0 Journal Article %J Analytical Chemistry %D 2010 %T Alkylating Tryptic Peptides to Enhance Electrospray Ionization Mass Spectrometry Analysis %A Kulevich, Suzanne E. %A Frey, Brian L. %A Kreitinger, Gloria %A L. M. Smith %B Analytical Chemistry %V 82 %P 10135-10142 %8 Dec %G eng %2 PMC3075559 %R 10.1021/ac1019792 %F ISI 2011 01 06 %0 Journal Article %J Journal of Physical Chemistry C %D 2010 %T Formation and Stability of Alkylthiol Monolayers on Carbon Substrates %A Lockett, Matthew R. %A L. M. Smith %B Journal of Physical Chemistry C %V 114 %P 12635-12641 %8 Jul %G eng %2 PMC2917760 %R 10.1021/jp102821x %F 2010 08 06 %0 Journal Article %J Langmuir %D 2010 %T Halogenation of Carbon Substrates for Increased Reactivity with Alkenes %A Lockett, Matthew R. %A L. M. Smith %B Langmuir %V 26 %P 16642-16646 %8 Nov %G eng %R 10.1021/la103050z %F ISI 2010 12 31 %0 Journal Article %J Analytical Chemistry %D 2010 %T Integrated Microfluidic Device for Automated Single Cell Analysis Using Electrophoretic Separation and Electrospray Ionization Mass Spectrometry %A Mellors, J. Scott %A Jorabchi, Kaveh %A L. M. Smith %A Ramsey, J. Michael %B Analytical Chemistry %V 82 %P 967-973 %8 Feb %G eng %R 10.1021/ac902218y %F ISI 2010 02 11 %0 Journal Article %J Nature %D 2010 %T Nanotechnology: Molecular robots on the move %A L. M. Smith %B Nature %V 465 %P 167-168 %8 May %@ 0028-0836 %G eng %R 10.1038/465167a %F ISI 2010 05 20 %0 Journal Article %J Langmuir %D 2009 %T Acyl Chloride-Modified Amorphous Carbon Substrates for the Attachment of Alcohol-, Thiol-, and Amine-Containing Molecules %A Lockett, M. R. %A Carlisle, J. C. %A Le, D. V. %A L. M. Smith %B Langmuir %V 25 %P 5120-5126 %8 May %G eng %2 PMC2824164 %R 10.1021/la804140r %F ISI 2009 05 14 %0 Journal Article %J Langmuir %D 2009 %T Attaching Molecules to Chlorinated and Brominated Amorphous Carbon Substrates via Grignard Reactions %A Lockett, M. R. %A L. M. Smith %B Langmuir %V 25 %P 3340-3343 %8 Mar %G eng %2 PMC2765564 %R 10.1021/la8039626 %F ISI 2009 03 26 %0 Journal Article %J Langmuir %D 2009 %T Controlling Oligonucleotide Surface Density in Light-Directed DNA Array Fabrication %A Chen, S. %A Phillips, M. F. %A Cerrina, F. %A L. M. Smith %B Langmuir %V 25 %P 6570-6575 %8 Jun %G eng %2 PMC2693259 %R 10.1021/la9000297 %F ISI 2009 06 26 %0 Journal Article %J Analytical Chemistry %D 2009 %T Fabrication and Characterization of DNA Arrays Prepared on Carbon-on-Metal Substrates %A Lockett, M. R. %A L. M. Smith %B Analytical Chemistry %V 81 %P 6429-6437 %8 Aug %G eng %2 PMC2797128 %R 10.1021/ac900807q %F ISI 2009 08 13 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2009 %T Modifying the Charge State Distribution of Proteins in Electrospray Ionization Mass Spectrometry by Chemical Derivatization %A Krusemark, C. J. %A Frey, B. L. %A Belshaw, P. J. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 20 %P 1617-1625 %8 Sep %G eng %2 PMC2776692 %R 10.1016/j.jasms.2009.04.017 %F ISI 2009 10 29 %0 Journal Article %J Langmuir %D 2009 %T Photopatterned Thiol Surfaces for Biomolecule Immobilization %A Chen, S. Y. %A L. M. Smith %B Langmuir %V 25 %P 12275-12282 %8 Oct %G eng %2 PMC2768491 %R 10.1021/la9017135 %F ISI 2009 10 23 %0 Journal Article %J Analytical Chemistry %D 2009 %T Rapid Determination of RNA Accessible Sites by Surface Plasmon Resonance Detection of Hybridization to DNA Arrays %A Mandir, Joshua B. %A Lockett, Matthew R. %A Phillips, Margaret F. %A Allawi, Hatim T. %A Lyamichev, Victor I. %A L. M. Smith %B Analytical Chemistry %V 81 %P 8949-8956 %8 Nov %G eng %2 PMC2771317 %R 10.1021/ac9015962 %F ISI 2010 04 15 %0 Journal Article %J Analytical Chemistry %D 2009 %T Single Droplet Separations and Surface Partition Coefficient Measurements Using Laser Ablation Mass Spectrometry %A Jorabchi, K. %A L. M. Smith %B Analytical Chemistry %V 81 %P 9682-9688 %8 Dec %@ 0003-2700 %G eng %2 PMC2911232 %R 10.1021/ac901819r %0 Journal Article %J Plant Journal %D 2009 %T Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis %A Saracco, S. A. %A Hansson, M. %A Scalf, M. %A Walker, J. M. %A L. M. Smith %A Vierstra, R. D. %B Plant Journal %V 59 %P 344-358 %8 Jul %G eng %2 PMC3639010 %R 10.1111/j.1365-313X.2009.03862.x %F ISI 2009 07 17 %0 Journal Article %J Langmuir %D 2008 %T Aldehyde-terminated amorphous carbon substrates for the fabrication of biomolecule arrays %A Lockett, Matthew R. %A Shortreed, Michael R. %A L. M. Smith %B Langmuir %V 24 %P 9198-9203 %8 Sep %G eng %2 PMC2575013 %R 10.1021/la800991t %F ISI 2008 09 12 %0 Journal Article %J Journal of the American Chemical Society %D 2008 %T Carbon-on-metal films for surface plasmon resonance detection of DNA arrays %A Lockett, Matthew R. %A Weibel, Stephen C. %A Phillips, Margaret F. %A Shortreed, Michael R. %A Sun, Bin %A Corn, Robert M. %A Hamers, R. J. %A Cerrina, Franco %A L. M. Smith %B Journal of the American Chemical Society %V 130 %P 8611-8613 %8 Jul %G eng %2 PMC2527731 %R 10.1021/ja802454c %F ISI 2008 07 25 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2008 %T Charge assisted laser desorption/ionization mass spectrometry of droplets %A Jorabchi, K. %A Westphall, M. S. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 19 %P 833-840 %8 Jun %@ 1044-0305 %G eng %2 PMC2488387 %R 10.1016/j.jasms.2008.02.012 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2008 %T Is charge reduction in ESI really necessary? %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 19 %P 629-631 %8 May %G eng %2 PMC2533855 %R 10.1016/j.jasms.2008.02.002 %F ISI 2008 05 30 %0 Journal Article %J Journal of Combinatorial Chemistry %D 2008 %T Exploration of structure - Activity relationships among foldamer ligands for a specific protein binding site via parallel and split-and-mix library synthesis %A Murray, Justin K. %A Sadowsky, Jack D. %A Scalf, Mark %A L. M. Smith %A Tomita, York %A Gellman, S. H. %B Journal of Combinatorial Chemistry %V 10 %P 204-215 %8 Mar-Apr %G eng %R 10.1021/cc700153z %F ISI 2008 03 28 %0 Journal Article %J Analytical Chemistry %D 2008 %T Identification of Cell Surface Markers to Differentiate Rat Endothelial and Fibroblast Cells Using Lectin Arrays and LC-ESI-MS/MS %A Lee, J. E. %A Mirza, S. P. %A Didier, D. N. %A Scalf, M. %A Olivier, M. %A Greene, A. S. %A L. M. Smith %B Analytical Chemistry %V 80 %P 8269-8275 %8 Nov %G eng %2 PMC2950091 %R 10.1021/ac801390b %F ISI 2008 11 27 %0 Journal Article %J Nucleic Acids Research %D 2008 %T In situ oligonucleotide synthesis on carbon materials: stable substrates for microarray fabrication %A Phillips, Margaret F. %A Lockett, Matthew R. %A Rodesch, Matthew J. %A Shortreed, Michael R. %A Cerrina, Franco %A L. M. Smith %B Nucleic Acids Research %V 36 %8 Jan %G eng %2 PMC2248760 %R 10.1093/nar/gkm1103 %F ISI 2008 02 22 %0 Journal Article %J International Journal of Mass Spectrometry %D 2008 %T Ion-ion reactions with fixed-charge modified proteins to produce ions in a single, very high charge state %A Frey, B. L. %A Krusemark, C. J. %A Ledvina, A. R. %A Coon, J. J. %A Belshaw, P. J. %A L. M. Smith %B International Journal of Mass Spectrometry %V 276 %P 136-143 %8 Oct %G eng %2 PMC2598753 %R 10.1016/j.ijms.2008.07.029 %F ISI 2008 11 06 %0 Journal Article %J Analytical Chemistry %D 2008 %T Mass spectrometry of acoustically levitated droplets %A Westphall, Michael S. %A Jorabchi, Kaveh %A L. M. Smith %B Analytical Chemistry %V 80 %P 5847-5853 %8 Aug %G eng %2 PMC2561267 %R 10.1021/ac800317f %F ISI 2008 08 15 %0 Journal Article %J Analytical Chemistry %D 2008 %T Membrane protein separation and analysis by supercritical fluid chromatography-mass spectrometry %A Zhang, Xu %A Scalf, Mark %A Westphall, Michael S. %A L. M. Smith %B Analytical Chemistry %V 80 %P 2590-2598 %8 Apr %G eng %R 10.1021/ac702319u %F ISI 2008 04 18 %0 Journal Article %J Endothelium-Journal of Endothelial Cell Research %D 2008 %T Revealing the role of phosphatidylserine in shear stress-mediated protection in endothelial cells %A Freed, Julie K. %A Shortreed, Michael R. %A Kleefisch, Christopher J. %A L. M. Smith %A Greene, Andrew S. %B Endothelium-Journal of Endothelial Cell Research %V 15 %P 225-230 %G eng %2 PMC2579788 %R 10.1080/10623320802228849 %F ISI 2008 08 15 %0 Journal Article %J Stem Cells %D 2008 %T Secreted Proteoglycans Directly Mediate Human Embryonic Stem Cell-Basic Fibroblast Growth Factor 2 Interactions Critical for Proliferation %A Levenstein, M. E. %A Berggren, W. T. %A Lee, J. E. %A Conard, K. R. %A Llanas, R. A. %A Wagner, R. J. %A L. M. Smith %A Thomson, J. A. %B Stem Cells %S 26 %I ALPHAMED PRESS; 318 BLACKWELL ST, STE 260, DURHAM, NC 27701-2884 USA %V 26 %P 3099-3107 %G eng %R 10.1634/stemcells.2007-1056 %F ISI 1009 01 15 %0 Journal Article %J Langmuir %D 2008 %T A tetrafluorophenyl activated ester self-assembled monolayer for the immobilization of amine-modified oligonucleotides %A Lockett, Matthew R. %A Phillips, Margaret F. %A Jarecki, Jessica L. %A Peelen, Dora %A L. M. Smith %B Langmuir %V 24 %P 69-75 %8 Jan %G eng %2 PMC2533856 %R 10.1021/la702493u %0 Journal Article %J Analytical Chemistry %D 2007 %T Analysis of cell surface carbohydrate expression patterns in normal and tumorigenic human breast cell lines using lectin arrays %A Chen, S. Y. %A Zheng, T. %A Shortreed, M. R. %A Alexander, C. %A L. M. Smith %B Analytical Chemistry %V 79 %P 5698-5702 %8 Aug %@ 0003-2700 %G eng %2 PMC2529168 %R 10.1021/ac070423k %0 Journal Article %J Analytical Biochemistry %D 2007 %T Characterization of vascular endothelial growth factor receptors on the endothelial cell surface during hypoxia using whole cell binding arrays %A Lee, Ji Eun %A Didier, Damela N. %A Lockett, Matthew R. %A Scalf, Mark %A Greene, Andrew S. %A Olivier, Michael %A L. M. Smith %B Analytical Biochemistry %V 369 %P 241-247 %8 Oct %G eng %2 PMC2706495 %R 10.1016/j.ab.2007.06.010 %F ISI 2007 10 19 %0 Journal Article %J Analytical Chemistry %D 2007 %T Controlling charge on levitating drops %A Hilger, R. T. %A Westphal, M. S. %A L. M. Smith %B Analytical Chemistry %V 79 %P 6027-6030 %8 Aug %@ 0003-2700 %G eng %R 10.1021/ac070413j %0 Journal Article %J Nanotechnology %D 2007 %T Field emission from a single nanomechanical pillar %A Kim, Hyun S. %A Qin, Hua %A Westphall, Michael S. %A L. M. Smith %A Blick, Robert H. %B Nanotechnology %V 18 %8 Feb %G eng %R 10.1088/0957-4484/18/6/065201 %F ISI 2007 02 23 %0 Journal Article %J Biomedical Microdevices %D 2007 %T Lectin-modified microchannels for mammalian cell capture and purification %A Zheng, Ting %A Yu, Hongmei %A Alexander, Caroline M. %A Beebe, David J. %A L. M. Smith %B Biomedical Microdevices %V 9 %P 611-617 %8 Aug %G eng %R 10.1007/s10544-007-9074-2 %F ISI 2007 09 14 %0 Journal Article %J Analytical Chemistry %D 2007 %T Molecular beacon-style hybridization assay for quantitative analysis of surface invasive cleavage reactions %A Lockett, M. R. %A Shortreed, M. R. %A L. M. Smith %B Analytical Chemistry %V 79 %P 6031-6036 %8 Aug %@ 0003-2700 %G eng %R 10.1021/ac070424c %0 Journal Article %J Analytical Chemistry %D 2007 %T Relative quantification of carboxylic acid metabolites by liquid chromatography - Mass spectrometry using isotopic variants of cholamine %A Lamos, Shane M. %A Shortreed, Michael R. %A Frey, Brian L. %A Belshaw, Peter J. %A L. M. Smith %B Analytical Chemistry %V 79 %P 5143-5149 %8 Jul %G eng %R 10.1021/ac062416m %F ISI 2007 09 14 %0 Journal Article %J Applied Physics Letters %D 2007 %T Subthreshold field emission from thin silicon membranes %A Qin, H. %A Kim, H. S. %A Blick, R. H. %A Westphall, M. S. %A L. M. Smith %B Applied Physics Letters %V 91 %8 Oct %@ 0003-6951 %G eng %] 183506 %R 10.1063/1.2805015 %0 Journal Article %J Langmuir %D 2006 %T Covalent Photochemical Functionalization of Amorphous Carbon Thin Films for Integrated Real-Time Biosensing %A Sun, Bin %A Colavita, Paula E. %A Kim, Heesuk %A Lockett, Matthew %A Marcus, Matthew S. %A L. M. Smith %A Hamers, R. J. %B Langmuir %V 22 %P 9598-9605 %@ 0743-7463 %G English %R 10.1021/la061749b %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2006 %T Identification of mammalian cell lines using MALDI-TOF and LC-ESI-MS/MS mass spectrometry %A Zhang, X. %A Scalf, M. %A Berggren, T. W. %A Westphall, M. S. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 17 %P 490-499 %8 Apr %G eng %R 10.1016/j.jasms.2005.12.007 %F ISI 2006 week 19 %0 Journal Article %J Analytical Chemistry %D 2006 %T Ionizable isotopic labeling reagent for relative quantification of amine metabolites by mass spectrometry %A Shortreed, M. R. %A Lamos, S. M. %A Frey, B. L. %A Phillips, M. F. %A Patel, M. %A Belshaw, P. J. %A L. M. Smith %B Analytical Chemistry %V 78 %P 6398-6403 %8 Sep %G eng %R 10.1021/ac0607008 %F ISI 2006 09 29 %0 Journal Article %J Angewandte Chemie-International Edition %D 2006 %T Mixed isotope photoaffinity reagents for identification of small-molecule targets by mass spectrometry %A Lamos, S. M. %A Krusemark, C. J. %A McGee, C. J. %A Scalf, M. %A L. M. Smith %A Belshaw, P. J. %B Angewandte Chemie-International Edition %V 45 %P 4329-4333 %@ 1433-7851 %G eng %R 10.1002/anie.200600743 %0 Journal Article %J Nature %D 2006 %T Nanostructures - The manifold faces of DNA %A L. M. Smith %B Nature %V 440 %P 283-284 %8 Mar 16 %G eng %R 10.1038/440283a %F ISI 2006 week 14 %0 Journal Article %J Analytical Chemistry %D 2006 %T Quantitative detection of individual cleaved DNA molecules on surfaces using gold nanoparticles and scanning electron microscope imaging %A Nie, B. %A Shortreed, M. R. %A L. M. Smith %B Analytical Chemistry %V 78 %P 1528-1534 %8 Mar 1 %G eng %2 PMC2533858 %R 10.1021/ac052067g %F ISI 2006 week 14 %0 Journal Article %J Journal of Proteome Research %D 2006 %T Specific capture of mammalian cells by cell surface receptor binding to ligand immobilized on gold thin films %A Peelen, D. %A Kodoyianni, V. %A Lee, J. %A Zheng, T. %A Shortreed, M. R. %A L. M. Smith %B Journal of Proteome Research %V 5 %P 1580-1585 %8 Jul %G eng %2 PMC2586825 %R 10.1021/pr050467e %0 Journal Article %J American Journal of Physiology - Endocrinology & Metabolism %D 2005 %T alpha-Ketoisocaproate-induced hypersecretion of insulin by islets from diabetes-susceptible mice %A Rabaglia, M. E. %A Gray-Keller, M. P. %A Frey, B. L. %A Shortreed, M. R. %A L. M. Smith %A Attie, A. D. %B American Journal of Physiology - Endocrinology & Metabolism %V 289 %P E218-E224 %8 Aug %G eng %R 10.1152/ajpendo.00573.2004 %F ISI 2005 week 32 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2005 %T Controlling gas-phase reactions for efficient charge reduction electrospray mass spectrometry of intact proteins %A Frey, B. L. %A Lin, Y. %A Westphall, M. S. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 16 %P 1876-1887 %8 Nov %G eng %2 PMC1489883 %R 10.1016/j.jasms.2005.07.019 %F ISI 2005 week 49 %0 Journal Article %J Journal of the American Chemical Society %D 2005 %T Efficient synthesis of a beta-peptide combinatorial library with microwave irradiation %A Murray, J. K. %A Farooqi, B. %A Sadowsky, J. D. %A Scalf, M. %A Freund, W. A. %A L. M. Smith %A Chen, J. D. %A Gellman, S. H. %B Journal of the American Chemical Society %V 127 %P 13271-13280 %8 Sep 28 %G eng %R 10.1021/ja052733v %F ISI 2005 week 43 %0 Journal Article %J Langmuir %D 2005 %T Immobilization of amine-modified oligonucleotides on aldehyde-terminated alkanethiol monolayers on gold %A Peelen, D. %A L. M. Smith %B Langmuir %V 21 %P 266-271 %8 Jan 4 %G eng %R 10.1021/la048166r %F ISI 2005 week 07 %0 Journal Article %J Journal of the American Chemical Society %D 2005 %T Lectin arrays for profiling cell surface carbohydrate expression %A Zheng, T. %A Peelen, D. %A L. M. Smith %B Journal of the American Chemical Society %V 127 %P 9982-9983 %8 Jul 20 %G eng %R 10.1021/ja0505550 %F ISI 2005 week 34 %0 Journal Article %J Analytical Chemistry %D 2005 %T Parallel single nucleotide polymorphism genotyping by surface invasive cleavage with universal detection %A Chen, Y. %A Shortreed, M. R. %A Olivier, M. %A L. M. Smith %B Analytical Chemistry %V 77 %P 2400-2405 %8 Apr 15 %G eng %R 10.1021/ac0483825 %F ISI 2005 week 20 %0 Journal Article %J Analytical Chemistry %D 2005 %T Scoring single-nucleotide polymorphisms at the single-molecule level by counting individual DNA cleavage events on surfaces %A Nie, B. %A Shortreed, M. R. %A L. M. Smith %B Analytical Chemistry %V 77 %P 6594-6600 %8 Oct 15 %G eng %R 10.1021/ac051025p %F ISI 2005 week 47 %0 Journal Article %J Nucleic Acids Research %D 2005 %T A thermodynamic approach to designing structure-free combinatorial DNA word sets %A Shortreed, M. R. %A Chang, S. B. %A Hong, D. G. %A Phillips, M. %A Campion, B. %A Tulpan, D. C. %A Andronescu, M. %A Condon, A. %A Hoos, H. H. %A L. M. Smith %B Nucleic Acids Research %V 33 %P 4965-4977 %G eng %2 PMC1199559 %R 10.1093/nar/gki812 %F ISI 2005 week 42 %0 Journal Article %J Nucleic Acids Research %D 2005 %T Thermodynamically based DNA strand design %A Tulpan, D. %A Andronescu, M. %A Chang, S. B. %A Shortreed, M. R. %A Condon, A. %A Hoos, H. H. %A L. M. Smith %B Nucleic Acids Research %V 33 %P 4951-4964 %G eng %R 10.1093/nar/gki773 %F ISI 2005 week 42 %0 Journal Article %J Plant Physiology %D 2005 %T Tripeptidyl peptidase II. An oligomeric protease complex from Arabidopsis %A Book, A. J. %A Yang, P. Z. %A Scalf, M. %A L. M. Smith %A Vierstra, R. D. %B Plant Physiology %V 138 %P 1046-1057 %8 Jun %G eng %2 PMC1150419 %R 10.1104/pp.104.057406 %F ISI 2005 week 28 %0 Journal Article %J Nucleic Acids Research %D 2004 %T Demonstration of a universal surface DNA computer %A Su, X. P. %A L. M. Smith %B Nucleic Acids Research %V 32 %P 3115-3123 %8 Jun %G eng %2 PMC434441 %R 10.1093/nar/gkh635 %F ISI 2004 week 31 %0 Journal Article %J Biopolymers %D 2004 %T Invasive cleavage reactions on DNA-modified diamond surfaces %A Lu, M. C. %A Knickerbocker, T. %A Cai, W. %A Yang, W. S. %A Hamers, R. J. %A L. M. Smith %B Biopolymers %V 73 %P 606-613 %8 Apr 5 %G eng %R 10.1002/bip.20007 %F ISI 2004 week 20 %0 Journal Article %J Journal of the American Chemical Society %D 2004 %T Surface amplification of invasive cleavage products %A Chen, Y. %A Shortreed, M. R. %A Peelen, D. %A Lu, M. C. %A L. M. Smith %B Journal of the American Chemical Society %V 126 %P 3016-3017 %8 Mar 17 %G eng %R 10.1021/ja039355j %F ISI 2004 week 15 %0 Generic %D 2003 %T Creating Chemical and Biological Diamond Interfaces %A Russell, J. N. %A Butler, J. E. %A Hamers, R. J. %A L. M. Smith %A Bent, S. F. %I Naval Research Laboratory %C Washington, D.C. %G eng %0 Journal Article %J Langmuir %D 2003 %T DNA-modified diamond surfaces %A Knickerbocker, T. %A Strother, T. %A Schwartz, M. P. %A Russell, J. N. %A Butler, J. %A L. M. Smith %A Hamers, R. J. %B Langmuir %V 19 %P 1938-1942 %8 Mar 18 %G eng %R 10.1021/la026279 %F ISI 2003 week 15 %0 Journal Article %J Analytical Chemistry %D 2003 %T Mass spectrometric analysis of DNA mixtures: Instrumental effects responsible for decreased sensitivity with increasing mass %A Chen, X. Y. %A Westphall, M. S. %A L. M. Smith %B Analytical Chemistry %V 75 %P 5944-5952 %8 Nov 1 %G eng %R 10.1021/ac030127h %F ISI 2003 week 48 %0 Journal Article %J Journal of Physical Chemistry B %D 2002 %T Chemical modification and patterning of iodine-terminated silicon surfaces using visible light %A Cai, W. %A Lin, Z. %A Strother, T. %A L. M. Smith %A Hamers, R. J. %B Journal of Physical Chemistry B %V 106 %P 2656-2664 %8 Mar 14 %G eng %R 10.1021/jp013523h %0 Journal Article %J International Journal of Mass Spectrometry %D 2002 %T Collision cross sections of gas phase DNA ions %A Moradian, A. %A Scalf, M. %A Westphall, M. S. %A L. M. Smith %A Douglas, D. J. %B International Journal of Mass Spectrometry %V 219 %P 161-170 %8 Aug 1 %G eng %R 10.1016/S1387-3806(02)00546-8 %0 Journal Article %J Materials Research Society Symposium Proceedings %D 2002 %T Covalently-linked adducts of single-walled nanotubes with biomolecules: Synthesis, hybridization, and biologically-directed surface assembly %A Baker, Sarah E. %A Lasseter, Tami L. %A L. M. Smith %A Hamers, R. J. %B Materials Research Society Symposium Proceedings %V 737 %@ 0272-9172 %G English %R 10.1557/PROC-761-F4.6 %0 Journal Article %J Langmuir %D 2002 %T DNA attachment and hybridization at the silicon (100) surface %A Lin, Z. %A Strother, T. %A Cai, W. %A Cao, X. P. %A L. M. Smith %A Hamers, R. J. %B Langmuir %V 18 %P 788-796 %8 Feb 5 %@ 0743-7463 %G eng %R 10.1021/la010892w %0 Journal Article %J Nature Materials %D 2002 %T DNA-modified nanocrystalline diamond thin-films as stable, biologically active substrates %A Yang, W. S. %A Auciello, O. %A Butler, J. E. %A Cai, W. %A Carlisle, J. A. %A Gerbi, J. %A Gruen, D. M. %A Knickerbocker, T. %A Lasseter, T. L. %A Russell, J. N. %A L. M. Smith %A Hamers, R. J. %B Nature Materials %V 1 %P 253-257 %8 Dec %G eng %R 10.1038/nmat779 %F ISI 2003 week 15 %0 Journal Article %J Analytical Chemistry %D 2002 %T Multiplexed gene expression analysis using the invader RNA assay with MALDI-TOF mass spectrometry detection %A Berggren, W. T. %A Takova, T. %A Olson, M. C. %A Eis, P. S. %A Kwiatkowski, R. W. %A L. M. Smith %B Analytical Chemistry %V 74 %P 1745-1750 %8 Apr 15 %G eng %R 10.1021/ac011167t %0 Journal Article %J Langmuir %D 2002 %T Photochemical functionalization of diamond films %A Strother, T. %A Knickerbocker, T. %A Russell, J. N. %A Butler, J. E. %A L. M. Smith %A Hamers, R. J. %B Langmuir %V 18 %P 968-971 %8 Feb 19 %G eng %R 10.1021/la0112561 %0 Journal Article %J Materials Research Society Symposium Proceedings %D 2002 %T Preparation and electrochemical characterization of DNA-modified nanocrystalline diamond films %A Yang, Wensha %A Auciello, Orlando %A Butler, James E. %A Cai, Wei %A Carlisle, John A. %A Gerbi, Jennifer E. %A Gruen, Dieter M. %A Knickerbocker, Tanya %A Lasseter, Tami L. %A Russell, John N., Jr. %A L. M. Smith %A Hamers, R. J. %B Materials Research Society Symposium Proceedings %V 737 %@ 0272-9172 %G English %R 10.1557/PROC-737-F4.4 %0 Journal Article %J Analytical Chemistry %D 2002 %T Single-pulse nanoelectrospray ionization %A Berggren, W. T. %A Westphall, M. S. %A L. M. Smith %B Analytical Chemistry %V 74 %P 3443-3448 %8 Jul 15 %G eng %R 10.1021/ac010975h %0 Journal Article %J Journal of the American Chemical Society %D 2002 %T Structure-specific DNA cleavage on surfaces %A Lu, M. C. %A Hall, J. G. %A Shortreed, M. R. %A Wang, L. M. %A Berggren, W. T. %A Stevens, P. W. %A Kelso, D. M. %A Lyamichev, V. %A Neri, B. %A Skinner, J. L. %A L. M. Smith %B Journal of the American Chemical Society %V 124 %P 7924-7931 %8 Jul 10 %G eng %R 10.1021/ja012082c %0 Journal Article %J Human Mutation %D 2002 %T A surface invasive cleavage assay for highly parallel SNP analysis %A Lu, M. C. %A Shortreed, M. R. %A Hall, J. G. %A Wang, L. M. %A Berggren, T. %A Stevens, P. W. %A Kelso, D. M. %A Lyamichev, V. %A Neri, B. %A L. M. Smith %B Human Mutation %V 19 %P 416-422 %G eng %R 10.1002/humu.10071 %0 Journal Article %J Nucleic Acids Research %D 2001 %T Analysis of single nucleotide polymorphisms with solid phase invasive cleavage reactions %A Stevens, P. W. %A Hall, J. G. %A Lyamichev, V. %A Neri, B. P. %A Lu, M. C. %A Wang, L. M. %A L. M. Smith %A Kelso, D. M. %B Nucleic Acids Research %V 29 %P art. no.-e77 %8 Aug %@ 0305-1048 %G English %9 Article %R 10.1093/nar/29.16.e77 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 2001 %T A cylindrical capacitor ionization source: droplet generation and controlled charge reduction for mass spectrometry %A Ebeling, D. D. %A Westphall, M. S. %A Scalf, M. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 15 %P 401-5 %@ 0951-4198 (Print)
0951-4198 (Linking) %G English %9 Article %R 10.1002/rcm.245 %0 Journal Article %J Nature Biotechnology %D 2001 %T A DNA computing readout operation based on structure-specific cleavage %A Wang, L. M. %A Hall, J. G. %A Lu, M. C. %A Liu, Q. H. %A L. M. Smith %B Nature Biotechnology %V 19 %P 1053-1059 %8 Nov %@ 1087-0156 %G English %9 Article %R 10.1038/nbt1101-1053 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 2000 %T Analysis of single nucleotide polymorphisms by primer extension and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry %A Fei, Z. D. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 14 %P 950-959 %@ 0951-4198 %G eng %R 10.1002/(sici)1097-0231(20000615)14:11<950::aid-rcm971>3.0.co;2-3 %0 Journal Article %J Analytical Chemistry %D 2000 %T Charge reduction electrospray mass spectrometry %A Scalf, M. %A Westphall, M. S. %A L. M. Smith %B Analytical Chemistry %V 72 %P 52-60 %8 Jan %@ 0003-2700 %G eng %R 10.1021/ac990878c %0 Journal Article %J Analytical Chemistry %D 2000 %T Corona discharge in charge reduction electrospray mass spectrometry %A Ebeling, D. D. %A Westphall, M. S. %A Scalf, M. %A L. M. Smith %B Analytical Chemistry %V 72 %P 5158-5161 %8 Nov %@ 0003-2700 %G eng %R 10.1021/ac000559h %0 Journal Article %J Nucleic Acids Research %D 2000 %T Covalent attachment of oligodeoxyribonucleotides to amine-modified Si (001) surfaces %A Strother, T. %A Hamers, R. J. %A L. M. Smith %B Nucleic Acids Research %V 28 %P 3535-3541 %8 Sep %@ 0305-1048 %G eng %2 PMC110746 %R 10.1093/nar/28.18.3535 %0 Journal Article %J Nature %D 2000 %T DNA computing on surfaces %A Liu, Q. %A Wang, L. %A Frutos, A. G. %A Condon, A. E. %A Corn, R. M. %A L. M. Smith %B Nature %V 403 %P 175-9 %8 Jan 13 %@ 0028-0836 (Print)
0028-0836 (Linking) %G eng %R 10.1038/35003155 %0 Journal Article %J Analytical Chemistry %D 2000 %T Genetic identification by mass spectrometric analysis of single-nucleotide polymorphisms: Ternary encoding of genotypes %A Griffin, T. J. %A L. M. Smith %B Analytical Chemistry %V 72 %P 3298-3302 %8 Jul %@ 0003-2700 %G eng %R 10.1021/ac991390e %0 Journal Article %J Langmuir %D 2000 %T Hydrophilic/hydrophobic patterned surfaces as templates for DNA arrays %A Gillmor, S. D. %A Thiel, A. J. %A Strother, T. C. %A L. M. Smith %A Lagally, M. G. %B Langmuir %V 16 %P 7223-7228 %8 Sep %@ 0743-7463 %G eng %R 10.1021/la991026a %0 Journal Article %J Journal of the American Chemical Society %D 2000 %T Multiple word DNA computing on surfaces %A Wang, L. M. %A Liu, Q. H. %A Corn, R. M. %A Condon, A. E. %A L. M. Smith %B Journal of the American Chemical Society %V 122 %P 7435-7440 %8 Aug %@ 0002-7863 %G eng %R 10.1021/ja0010195 %0 Journal Article %J Trends in Biotechnology %D 2000 %T Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry %A Griffin, T. J. %A L. M. Smith %B Trends in Biotechnology %V 18 %P 77-84 %8 Feb %@ 0167-7799 %G eng %R 10.1016/s0167-7799(99)01401-8 %0 Journal Article %J Analytical Chemistry %D 2000 %T Site-specific mass tagging with stable isotopes in proteins for accurate and efficient protein identification %A Chen, X. %A L. M. Smith %A Bradbury, E. M. %B Analytical Chemistry %V 72 %P 1134-1143 %8 Mar %@ 0003-2700 %G eng %R 10.1021/ac9911600 %0 Journal Article %J Journal of the American Chemical Society %D 2000 %T Synthesis and characterization of DNA-modified silicon (111) surfaces %A Strother, T. %A Cai, W. %A Zhao, X. S. %A Hamers, R. J. %A L. M. Smith %B Journal of the American Chemical Society %V 122 %P 1205-1209 %8 Feb %@ 0002-7863 %G eng %R 10.1021/ja9936161 %0 Journal Article %J Science %D 1999 %T Controlling charge states of large ions %A Scalf, M. %A Westphall, M. S. %A Krause, J. %A Kaufman, S. L. %A L. M. Smith %B Science %V 283 %P 194-197 %8 Jan %@ 0036-8075 %G eng %R 10.1126/science.283.5399.194 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1999 %T Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry %A Griffin, Timothy J. %A Hall, Jeff G. %A Prudent, James R. %A L. M. Smith %B Proceedings of the National Academy of Sciences of the United States of America %V 96 %P 6301-6306 %@ 0027-8424 %G English %2 PMC26876 %R 10.1073/pnas.96.11.6301 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 1999 %T High resolution characterization of DNA fragment ions produced by ultraviolet matrix-assisted laser desorption/ionization using linear and reflecting time-of-flight mass spectrometry %A Krause, Joern %A Scalf, Mark %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 10 %P 423-429 %@ 1044-0305 %G English %R 10.1016/s1044-0305(99)00009-4 %0 Book Section %D 1999 %T MALDI-TOF mass spectrometric detection of PNA hybrids for genetic analysis %A Griffin, Timothy J. %A Tang, Wei %A L. M. Smith %E Nielsen, P. E. %E Egholm, M. %7 1 %I Horizon Scientific Press %P 143-154 %@ 1-898486-16-6 %G English %& 3.5 %0 Journal Article %J Biosystems %D 1999 %T Progress toward demonstration of a surface based DNA computation: a one word approach to solve a model satisfiability problem %A Liu, Q. %A Frutos, A. G. %A Wang, L. %A Thiel, A. J. %A Gillmor, S. D. %A Strother, C. T. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %B Biosystems %V 52 %P 25-33 %@ 0303-2647 %G English %R 10.1016/s0303-2647(99)00029-5 %0 Journal Article %J Analytical Chemistry %D 1999 %T Stable-isotope-assisted MALDI-TOF mass spectrometry for accurate determination of nucleotide compositions of PCR products %A Chen, X. %A Fei, Z. D. %A L. M. Smith %A Bradbury, E. M. %A Majidi, V. %B Analytical Chemistry %V 71 %P 3118-3125 %8 Aug %@ 0003-2700 %G eng %R 10.1021/ac9812680 %0 Conference Paper %D 1999 %T A surface-based approach to DNA computation %A Liu, Q. %A Guo, Z. %A Fei, Z. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %E Landweber, L. F. %E Baum, E. B. %I American Math. Soc %C Princeton, NJ %P 123-132 %8 1999 %G eng %0 Journal Article %J Biosystems %D 1999 %T Surface-based DNA computing operations: DESTROY and READOUT %A Wang, L. %A Liu, Q. %A Frutos, A. G. %A Gillmor, S. D. %A Thiel, A. J. %A Strother, T. C. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %B Biosystems %V 52 %P 189-191 %@ 0303-2647 %G English %R 10.1016/s0303-2647(99)00046-5 %0 Journal Article %J Analytical Biochemistry %D 1998 %T An approach to predicting the stabilities of peptide nucleic acid : DNA duplexes %A Griffin, T. J. %A L. M. Smith %B Analytical Biochemistry %V 260 %P 56-63 %8 Jun %@ 0003-2697 %G eng %R 10.1006/abio.1998.2686 %0 Journal Article %J Journal of Computational Biology %D 1998 %T DNA computing on surfaces: Encoding information at the single base level %A Liu, Q. H. %A Frutos, A. G. %A Thiel, A. J. %A Corn, R. M. %A L. M. Smith %B Journal of Computational Biology %V 5 %P 269-278 %8 Sum %@ 1066-5277 %G eng %R 10.1089/cmb.1998.5.269 %0 Journal Article %J Journal of the American Chemical Society %D 1998 %T Enzymatic ligation reactions of DNA "words" on surfaces for DNA computing %A Frutos, A. G. %A L. M. Smith %A Corn, R. M. %B Journal of the American Chemical Society %V 120 %P 10277-10282 %8 Oct %@ 0002-7863 %G eng %R 10.1021/ja982030w %0 Journal Article %J Nucleic Acids Research %D 1998 %T MALDI-TOF mass spectrometric typing of single nucleotide polymorphisms with mass-tagged ddNTPs %A Fei, Z. D. %A Ono, T. %A L. M. Smith %B Nucleic Acids Research %V 26 %P 2827-2828 %8 Jun %@ 0305-1048 %G eng %2 PMC147612 %R 10.1093/nar/26.11.2827 %0 Journal Article %J Genome Research %D 1998 %T A software system for data analysis in automated DNA sequencing %A Giddings, M. C. %A Severin, J. %A Westphall, M. %A Wu, J. Z. %A L. M. Smith %B Genome Research %V 8 %P 644-665 %8 Jun %@ 1054-9803 %G eng %2 PMC310740 %R 10.1101/gr.8.6.644 %0 Journal Article %J Journal of Computational Biology %D 1998 %T A surface-based approach to DNA computation %A L. M. Smith %A Corn, R. M. %A Condon, A. E. %A Lagally, M. G. %A Frutos, A. G. %A Liu, Q. H. %A Thiel, A. J. %B Journal of Computational Biology %V 5 %P 255-267 %8 Sum %@ 1066-5277 %G eng %R 10.1089/cmb.1998.5.255 %0 Journal Article %J Nucleic Acids Research %D 1997 %T 2'-fluoro modified nucleic acids: polymerase-directed synthesis, properties and stability to analysis by matrix-assisted laser desorption/ionization mass spectrometry %A Ono, T. %A Scalf, M. %A L. M. Smith %B Nucleic Acids Research %V 25 %P 4581-4588 %8 Nov %@ 0305-1048 %G eng %2 PMC147098 %R 10.1093/nar/25.22.4581 %0 Journal Article %J Analytical Chemistry %D 1997 %T Controlling DNA Fragmentation in MALDI-MS by Chemical Modification %A Tang, Wei %A Zhu, Lin %A L. M. Smith %B Analytical Chemistry %V 69 %P 302-312 %@ 0003-2700 %G English %R 10.1021/ac960865o %0 Journal Article %J Nucleic Acids Research %D 1997 %T Demonstration of a word design strategy for DNA computing on surfaces %A Frutos, A. G. %A Liu, Q. H. %A Thiel, A. J. %A Sanner, A. M. W. %A Condon, A. E. %A L. M. Smith %A Corn, R. M. %B Nucleic Acids Research %V 25 %P 4748-4757 %8 Dec %@ 0305-1048 %G eng %2 PMC147124 %R 10.1093/nar/25.23.4748 %0 Journal Article %J Analytical Chemistry %D 1997 %T DNA analysis using an electrospray scanning mobility particle sizer %A Mouradian, S. %A Skogen, J. W. %A Dorman, F. D. %A Zarrin, F. %A Kaufman, S. L. %A L. M. Smith %B Analytical Chemistry %V 69 %P 919-925 %8 Mar %@ 0003-2700 %G eng %R 10.1021/ac960785k %0 Journal Article %J Nature Biotechnology %D 1997 %T Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization %A Guo, Z. %A Liu, Q. H. %A L. M. Smith %B Nature Biotechnology %V 15 %P 331-335 %8 Apr %@ 1087-0156 %G eng %R 10.1038/nbt0497-331 %0 Journal Article %J International Journal of Mass Spectrometry and Ion Processes %D 1997 %T Factors influencing oligonucleotide stability in matrix-assisted laser desorption/ionization (MALDI) mass spectroscopy %A Tang, Wei %A Krause, Joern %A Zhu, Lin %A L. M. Smith %B International Journal of Mass Spectrometry and Ion Processes %V 169/170 %P 301-311 %@ 0168-1176 %G English %R 10.1016/s0168-1176(97)00204-8 %0 Journal Article %J Nature Biotechnology %D 1997 %T Genetic analysis by peptide nucleic acid affinity MALDI-TOF mass spectrometry %A Griffin, T. J. %A Tang, W. %A L. M. Smith %B Nature Biotechnology %V 15 %P 1368-1372 %8 Dec %@ 1087-0156 %G eng %R 10.1038/nbt1297-1368 %0 Journal Article %J Analytical Chemistry %D 1997 %T In situ surface plasmon resonance imaging detection of DNA hybridization to oligonucleotide arrays on gold surfaces %A Thiel, A. J. %A Frutos, A. G. %A Jordan, C. E. %A Corn, R. M. %A L. M. Smith %B Analytical Chemistry %V 69 %P 4948-4956 %8 Dec %@ 0003-2700 %G eng %R 10.1021/ac9708001 %0 Journal Article %J Nucleic Acids Research %D 1997 %T Ligation-mediated PCR amplification of specific fragments from a Class-II restriction endonuclease %A Guilfoyle, Richard A. %A Leeck, Charles L. %A Kroening, K. Dubear %A L. M. Smith %A Guo, Zhen %B Nucleic Acids Research %V 25 %P 1854-1858 %@ 0305-1048 %G English %2 PMC146646 %R 10.1093/nar/25.9.1854 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 1997 %T Positive ion formation in the ultraviolet matrix- assisted laser desorption/ionization analysis of oligonucleotides by using 2,5-dihydroxybenzoic acid %A Tang, Wei %A Nelson, Christine M. %A Zhu, Lin %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 8 %P 218-224 %@ 1044-0305 %G English %R 10.1016/s1044-0305(96)00237-1 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 1996 %T Analyzing sequencing reactions from bacteriophage M13 by matrix-assisted laser desorption/ionization mass spectrometry %A Mouradian, S. %A Rank, D. R. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 10 %P 1475-1478 %@ 0951-4198 %G eng %R 10.1002/(sici)1097-0231(199609)10:12<1475::aid-rcm696>3.3.co;2-3 %0 Journal Article %J Optics and Photonics News %D 1996 %T Automated DNA sequencers: the next generation %A Rank, David %A L. M. Smith %B Optics and Photonics News %I OSA %V 7 %P 29-33 %8 1996/03/01 %G eng %R 10.1364/OPN.7.3.000029 %0 Journal Article %J Electrophoresis %D 1996 %T Automatic matrix determination in four dye fluorescence-based DNA sequencing %A Yin, Z. B. %A Severin, J. %A Giddings, M. C. %A Huang, W. A. %A Westphall, M. S. %A L. M. Smith %B Electrophoresis %V 17 %P 1143-1150 %8 Jun %@ 0173-0835 %G eng %R 10.1002/elps.1150170626 %0 Journal Article %J Laboratory Robotics and Automation %D 1996 %T Automation in large-scale DNA sequencing %A Buxton, E. C. %A Westphall, M. %A Jacobson, W. %A Tong, X. C. %A L. M. Smith %B Laboratory Robotics and Automation %V 8 %P 339-349 %@ 0895-7533 %G eng %R 10.1002/(sici)1098-2728(1996)8:6<339::aid-lra3>3.0.co;2-1 %0 Journal Article %J Biochemica %D 1996 %T The Cleavase Fragment Length Polymorphism (CFLP) assay %A Brow, M. A. D. %A Oldenburg, M. C. %A Lyamichev, V. %A Heisler, L. M. %A Grotelueschen, J. %A Lyamicheva, N. %A Kozyavkin, S. %A Fors, L. %A Dahlberg, J. E. %A L. M. Smith %A Olive, D. M. %B Biochemica %V 1 %P 14-15 %G eng %0 Journal Article %J Journal of Clinical Microbiology %D 1996 %T Differentiation of bacterial 16S rRNA genes and intergenic regions and Mycobacterium tuberculosis katG genes by structure-specific endonuclease cleavage %A Brow, M. A. D. %A Oldenburg, M. C. %A Lyamichev, V. %A Heisler, L. M. %A Lyamicheva, N. %A Hall, J. G. %A Eagan, N. J. %A Olive, D. M. %A L. M. Smith %A Fors, L. %A Dahlberg, J. E. %B Journal of Clinical Microbiology %V 34 %P 3129-3137 %8 Dec %@ 0095-1137 %G eng %2 PMC229470 %0 Journal Article %J Proceedings of SPIE - The International Society for Optical Engineering %D 1996 %T Fragmentation mechanisms of oligonucleotides in MALDI mass spectrometry %A Nelson, Christine M. %A Zhu, Lin %A Tang, Wei %A L. M. Smith %A Crellin, Kevin %A Berry, Jamal %A Beauchamp, Jesse L. %B Proceedings of SPIE - The International Society for Optical Engineering %V 2680 %P 247-255 %@ 0277-786X %G English %R 10.1117/12.237612 %0 Journal Article %J Methods in Enzymology %D 1996 %T High-speed automated DNA sequencing in ultrathin slab gels %A L. M. Smith %A Brumley, Robert L., Jr. %A Buxton, Eric C. %A Giddings, Michael %A Marchbanks, Michael %A Tong, Xinchun %B Methods in Enzymology %V 271 %P 219-237 %@ 0076-6879 %G English %R 10.1016/S0076-6879(96)71012-1 %0 Journal Article %J Gene %D 1996 %T M13-102: A vector for facilitating construction and improving quality of M13 shotgun libraries %A Chen, D. H. %A Johnson, A. F. %A Severin, J. M. %A Rank, D. R. %A L. M. Smith %A Guilfoyle, R. A. %B Gene %V 172 %P 53-57 %8 Jun %@ 0378-1119 %G eng %R 10.1016/0378-1119(96)00048-0 %0 Journal Article %J Focus %D 1996 %T Mutation detection by cleavase fragment length polymorphism %A Brow, M. A. D. %A Oldenburg, M. C. %A Lyamichev, V. %A Heisler, L. M. %A Grotelueschen, J. %A Lyamicheva, N. %A Kozyavkin, S. %A Fors, L., %A Dahlberg, J. %A L. M. Smith %A Olive, D. M. %B Focus %V 18 %P 2-5 %G eng %0 Journal Article %J Analytical Biochemistry %D 1996 %T Purification of single-stranded M13 DNA by cooperative triple-helix-mediated affinity capture %A Johnson, A. F. %A Wang, R. F. %A Ji, H. M. %A Chen, D. H. %A Guilfoyle, R. A. %A L. M. Smith %B Analytical Biochemistry %V 234 %P 83-95 %8 Feb %@ 0003-2697 %G eng %R 10.1006/abio.1996.0053 %0 Journal Article %J Genomics %D 1996 %T Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture %A Ji, H. M. %A Francisco, T. %A L. M. Smith %A Guilfoyle, R. A. %B Genomics %V 31 %P 185-192 %8 Jan %@ 0888-7543 %G eng %R 10.1006/geno.1996.0030 %0 Journal Article %J Journal of the American Chemical Society %D 1996 %T A self-assembled matrix monolayer for UV-MALDI mass spectrometry %A Mouradian, S. %A Nelson, C. M. %A L. M. Smith %B Journal of the American Chemical Society %V 118 %P 8639-8645 %8 Sep %@ 0002-7863 %G eng %R 10.1021/ja953585j %0 Journal Article %J Nature Biotechnology %D 1996 %T Sequence from spectrometry: a realistic prospect? %A L. M. Smith %B Nature Biotechnology %V 14 %P 1084, 1087 %@ 1087-0156 %G English %R 10.1038/nbt0996-1084 %0 Journal Article %J Proceedings of SPIE - The International Society for Optical Engineering %D 1995 %T High-speed automated DNA sequencing utilizing from-the-side laser excitation %A Westphall, Michael S. %A Brumley, Robert L., Jr. %A Buxton, Eric C. %A L. M. Smith %B Proceedings of SPIE - The International Society for Optical Engineering %V 2386 %P 45-54 %@ 0277-786X %G English %R 10.1117/12.206007 %0 Journal Article %J Annual Review of Biophysics & Biomolecular Structure %D 1995 %T Mass spectrometry of nucleic acids: the promise of matrix-assisted laser desorption-ionization (MALDI) mass spectrometry %A Fitzgerald, Michael C. %A L. M. Smith %B Annual Review of Biophysics & Biomolecular Structure %V 24 %P 117-40 %@ 1056-8700 %G English %R 10.1146/annurev.bb.24.060195.001001 %0 Journal Article %J Journal of the American Chemical Society %D 1995 %T Oligodeoxynucleotide Fragmentation in MALDI/TOF Mass Spectrometry Using 355-nm Radiation %A Zhu, L. %A Parr, G. R. %A Fitzgerald, M. C. %A Nelson, C. M. %A L. M. Smith %B Journal of the American Chemical Society %V 117 %P 6048-6056 %8 Jun %@ 0002-7863 %G eng %R 10.1021/ja00127a018 %0 Journal Article %J Analytical Chemistry %D 1995 %T Side Excitation of Fluorescence in Ultrathin Slab Gel Electrophoresis %A Chen, D. H. %A Peterson, M. D. %A Brumley, R. L. %A Giddings, M. C. %A Buxton, E. C. %A Westphall, M. %A L. M. Smith %B Analytical Chemistry %V 67 %P 3405-3411 %8 Oct %@ 0003-2700 %G eng %R 10.1021/ac00115a007 %0 Journal Article %J Nucleic Acids Research %D 1994 %T Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports %A Guo, Zhen %A Guilfoyle, Richard A. %A Thiel, Andrew J. %A Wang, Renfeng %A L. M. Smith %B Nucleic Acids Research %V 22 %P 5456-65 %@ 0305-1048 %G English %2 PMC332096 %R 10.1093/nar/22.24.5456 %0 Journal Article %J Nucleic Acids Research %D 1994 %T A direct selection strategy for shotgun cloning and sequencing in the bacteriophage M13 %A Guilfoyle, Richard A. %A L. M. Smith %B Nucleic Acids Research %V 22 %P 100-7 %@ 0305-1048 %G English %2 PMC307752 %R 10.1093/nar/22.1.100 %0 Journal Article %J Analytical Biochemistry %D 1994 %T DNA sequencing with a hexamer string primer and dye-labeled terminators %A Hou, W. Y. %A L. M. Smith %B Analytical Biochemistry %V 221 %P 136-141 %8 Aug %@ 0003-2697 %G eng %R 10.1006/abio.1994.1389 %0 Journal Article %J Proceedings - Electrochemical Society %D 1994 %T Fabrication of microstructures for use in biological and optical applications %A Denton, D. D. %A Thiel, A. J. %A L. M. Smith %A Bajikar, S. %A White, V. %A Ghodssi, R. %A Fish, G. %A McCaughan, L. %B Proceedings - Electrochemical Society %V 94-14 %P 103-14 %@ 0161-6374 %G English %0 Journal Article %J DNA Sequence %D 1994 %T A high throughput system for the preparation of single stranded templates grown in microculture %A Kolner, Douglas E. %A Guilfoyle, Richard A. %A L. M. Smith %B DNA Sequence %V 4 %P 253-7 %@ 1042-5179 %G English %0 Journal Article %J Genetic Analysis, Techniques and Applications %D 1994 %T Rapid isolation of cosmid insert DNA by triple-helix-mediated affinity capture %A Ji, Huamin %A L. M. Smith %A Guilfoyle, Richard A. %B Genetic Analysis, Techniques and Applications %V 11 %P 43-7 %@ 1050-3862 %G English %R 10.1016/1050-3862(94)90060-4 %0 Journal Article %J Electrophoresis %D 1994 %T Separating field strength, temperature, and pulsing effects in pulsed field electrophoresis %A Mouradian, S. %A Brumley, R. L. %A L. M. Smith %B Electrophoresis %V 15 %P 1084-1090 %8 Aug-Sep %@ 0173-0835 %G eng %R 10.1002/elps.11501501162 %0 Journal Article %J JAMA %D 1994 %T Statement on use of DNA testing for presymptomatic identification of cancer risk %A Collins, F. S. %A Benjamin, L. J. %A Botstein, D. %A Cox, J. R. %A Davidson, N. %A Gray, J. W. %A Holtzman, N. %A Housman, D. E. %A Jamison, K. R. %A Nelkin, D. %A Rothstein, R. %A Smith, D. C. %A L. M. Smith %A Spence, M. A. %A Tilghman, S. M. %B JAMA %V 271 %P 785-785 %8 Mar %@ 0098-7484 %G eng %R 10.1001/jama.1994.03510340075038 %0 Journal Article %J Nucleic Acids Research %D 1993 %T An adaptive, object oriented strategy for base calling in DNA sequence analysis %A Giddings, Michael C. %A Brumley, Robert L., Jr. %A Haker, Michael %A L. M. Smith %B Nucleic Acids Research %V 21 %P 4530-40 %@ 0305-1048 %G English %2 PMC311186 %R 10.1093/nar/21.19.4530 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 1993 %T The analysis of mock DNA sequencing reactions using matrix-assisted laser desorption/ionization mass spectrometry %A Fitzgerald, M. C. %A Zhu, L. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 7 %P 895-897 %8 Oct %@ 0951-4198 %G eng %R 10.1002/rcm.1290071008 %0 Journal Article %J Journal of Physical Chemistry %D 1993 %T Analysis of resolution in DNA sequencing by capillary gel electrophoresis %A Luckey, J. A. %A Norris, T. B. %A L. M. Smith %B Journal of Physical Chemistry %V 97 %P 3067-3075 %8 Mar %@ 0022-3654 %G eng %R 10.1021/j100114a038 %0 Journal Article %J Cancer Detection and Prevention %D 1993 %T Automated DNA-Sequencing - a Look into the Future %A L. M. Smith %B Cancer Detection and Prevention %V 17 %P 283-288 %@ 0361-090x %G English %0 Journal Article %J Analytical Chemistry %D 1993 %T Basic matrices for the matrix-assisted laser desorption/ionization mass spectrometry of proteins and oligonucleotides %A Fitzgerald, M. C. %A Parr, G. R. %A L. M. Smith %B Analytical Chemistry %V 65 %P 3204-3211 %8 Nov %@ 0003-2700 %G eng %R 10.1021/ac00070a007 %0 Journal Article %J Current Opinion in Biotechnology %D 1993 %T DNA electrophoresis %A L. M. Smith %B Current Opinion in Biotechnology %V 4 %P 37-40 %@ 0958-1669 %G English %R 10.1016/0958-1669(93)90029-v %0 Journal Article %J Nucleic Acids Research %D 1993 %T Fluorescence-based DNA sequencing with hexamer primers %A Hou, Weiying %A L. M. Smith %B Nucleic Acids Research %V 21 %P 3331-2 %@ 0305-1048 %G English %2 PMC309784 %R 10.1093/nar/21.14.3331 %0 Journal Article %J Science %D 1993 %T The Future of DNA-Sequencing %A L. M. Smith %B Science %V 262 %P 530-532 %8 Oct 22 %@ 0036-8075 %G English %R 10.1126/science.8211178 %0 Journal Article %J Methods in Enzymology %D 1993 %T High-speed DNA sequencing by capillary gel electrophoresis %A Luckey, John A. %A Drossman, Howard %A Kostichka, Tony %A L. M. Smith %B Methods in Enzymology %V 218 %P 154-72 %@ 0076-6879 %G English %R 10.1016/0076-6879(93)18014-4 %0 Journal Article %J Electrophoresis %D 1993 %T A model for the mobility of single-stranded DNA in capillary gel electrophoresis %A Luckey, John A. %A L. M. Smith %B Electrophoresis %V 14 %P 492-501 %@ 0173-0835 %G English %R 10.1002/elps.1150140176 %0 Journal Article %J Analytical Chemistry %D 1993 %T Nonisotopic DNA detection system employing elastase and a fluorogenic rhodamine substrate %A Johnson, Arthur F. %A Struthers, Mary D. %A Pierson, Keith B. %A Mangel, Walter F. %A L. M. Smith %B Analytical Chemistry %V 65 %P 2352-9 %@ 0003-2700 %G English %R 10.1021/ac00065a031 %0 Journal Article %J Analytical Chemistry %D 1993 %T Optimization of electric field strength for DNA sequencing in capillary gel electrophoresis %A Luckey, J. A. %A L. M. Smith %B Analytical Chemistry %V 65 %P 2841-2850 %8 Oct %@ 0003-2700 %G eng %R 10.1021/ac00068a022 %0 Journal Article %J Proceedings of SPIE - The International Society for Optical Engineering %D 1993 %T Optimization of electric field strength for DNA sequencing in capillary gel electrophoresis %A Luckey, John A. %A L. M. Smith %B Proceedings of SPIE - The International Society for Optical Engineering %V 1891 %P 21-6 %@ 0277-786X %G English %R 10.1117/12.146715 %0 Journal Article %J Analytical Chemistry %D 1993 %T Rapid purification of double-stranded DNA by triple-helix-mediated affinity capture %A Ji, Huamin %A L. M. Smith %B Analytical Chemistry %V 65 %P 1323-8 %@ 0003-2700 %G English %R 10.1021/ac00058a005 %0 Journal Article %J DNA Sequence %D 1993 %T Solid phase purification in automated DNA sequencing %A Tong, Xinchun %A L. M. Smith %B DNA Sequence %V 4 %P 151-62 %@ 1042-5179 %G English %R 10.3109/10425179309015628 %0 Journal Article %J Bio/Technology %D 1992 %T High speed automated DNA sequencing in ultrathin slab gels %A Kostichka, Anthony J. %A Marchbanks, Michael L. %A Brumley, Robert L., Jr. %A Drossman, Howard %A L. M. Smith %B Bio/Technology %V 10 %P 78-81 %@ 0733-222X %G English %R 10.1038/nbt0192-78 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 1992 %T Matrix-assisted laser desorption/ionization mass spectrometry of synthetic oligodeoxyribonucleotides %A Parr, G. R. %A Fitzgerald, M. C. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 6 %P 369-372 %8 Jun %@ 0951-4198 %G eng %R 10.1002/rcm.1290060603 %0 Journal Article %J Nucleic Acids Research %D 1992 %T Rapid shotgun cloning utilizing the two base recognition endonuclease CviJI %A Fitzgerald, M. C. %A Skowron, P. %A Vanetten, J. L. %A L. M. Smith %A Mead, D. A. %B Nucleic Acids Research %V 20 %P 3753-3762 %8 Jul %@ 0305-1048 %G eng %2 PMC334028 %R 10.1093/nar/20.14.3753 %0 Journal Article %J Analytical Chemistry %D 1992 %T Solid-phase method for the purification of DNA sequencing reactions %A Tong, X. C. %A L. M. Smith %B Analytical Chemistry %V 64 %P 2672-2677 %8 Nov %@ 0003-2700 %G eng %R 10.1021/ac00046a004 %0 Journal Article %J BioTechniques %D 1992 %T Ultrathin DNA sequencing gels using microtrough vertical electrophoresis plates %A Kolner, Douglas E. %A Mead, David A. %A L. M. Smith %B BioTechniques %V 13 %P 338-9 %@ 0736-6205 %G English %0 Journal Article %J Laboratory Robotics and Automation %D 1991 %T Automated methods in DNA sequence analysis %A Luckey, John A. %A L. M. Smith %B Laboratory Robotics and Automation %V 3 %P 175-80 %@ 0895-7533 %G English %0 Journal Article %J BioTechniques %D 1991 %T Bst DNA polymerase permits rapid sequence analysis from nanogram amounts of template %A Mead, David A. %A McClary, J. A. %A Luckey, J. A. %A Kostichka, A. J. %A Witney, F. R. %A L. M. Smith %B BioTechniques %V 11 %P 76-8, 80, 82-4, 86-7 %@ 0736-6205 %G English %0 Journal Article %J Nature %D 1991 %T High-speed DNA sequencing by capillary gel electrophoresis %A L. M. Smith %B Nature %V 349 %P 812-813 %8 Feb %@ 0028-0836 %G eng %R 10.1038/349812a0 %0 Journal Article %J Nucleic Acids Research %D 1991 %T Rapid DNA sequencing by horizontal ultrathin gel electrophoresis %A Brumley, R. L. %A L. M. Smith %B Nucleic Acids Research %V 19 %P 4121-4126 %8 Aug %@ 0305-1048 %G eng %2 PMC328550 %R 10.1093/nar/19.15.4121 %0 Journal Article %J Bio/Technology %D 1991 %T A universal method for the direct cloning of PCR amplified nucleic acid %A Mead, D. A. %A Pey, N. K. %A Herrnstadt, C. %A Marcil, R. A. %A L. M. Smith %B Bio/Technology %V 9 %P 657-663 %8 Jul %@ 0733-222X %G eng %R 10.1038/nbt0791-657 %0 Journal Article %J BioTechniques %D 1990 %T An automated instrument for the performance of enzymatic DNA sequencing reactions %A D'Cunha, J. %A Berson, B. J. %A Brumley, R. L., Jr. %A Wagner, P. R. %A L. M. Smith %B BioTechniques %V 9 %P 80-5, 88-90 %@ 0736-6205 %G English %0 Journal Article %J Nucleic Acids Research %D 1990 %T High speed DNA sequencing by capillary electrophoresis %A Luckey, J. A. %A Drossman, H. %A Kostichka, A. J. %A Mead, D. A. %A Dcunha, J. %A Norris, T. B. %A L. M. Smith %B Nucleic Acids Research %V 18 %P 4417-4421 %8 Aug %@ 0305-1048 %G eng %2 PMC331259 %R 10.1093/nar/18.15.4417 %0 Journal Article %J Analytical Chemistry %D 1990 %T High-speed separations of DNA sequencing reactions by capillary electrophoresis %A Drossman, H. %A Luckey, J. A. %A Kostichka, A. J. %A Dcunha, J. %A L. M. Smith %B Analytical Chemistry %V 62 %P 900-903 %8 May %@ 0003-2700 %G eng %R 10.1021/ac00208a003 %0 Journal Article %J Struct. Methods, Proc. Conversation Discip. Biomol. Stereodyn., 6th %D 1990 %T Peak height variability and accuracy in automated DNA sequencing %A Sanders, Jane Z. %A MacKellar, Sara L. %A Otto, Barbara J. %A Dodd, Christopher T. %A Heiner, Cheryl %A Hood, Leroy E. %A L. M. Smith %B Struct. Methods, Proc. Conversation Discip. Biomol. Stereodyn., 6th %V 1 %P 89-102 %G English %0 Journal Article %J Genome %D 1989 %T Automated DNA sequencing and the analysis of the human genome %A L. M. Smith %B Genome %V 31 %P 929-37 %@ 0831-2796 %G English %R 10.1139/g89-164 %0 Journal Article %J American Biotechnology Laboratory %D 1989 %T DNA sequence analysis: past, present, and future %A L. M. Smith %B American Biotechnology Laboratory %V 7 %P 10, 12, 14, 16-18, 20-5 %@ 0749-3223 %G English %0 Journal Article %J Analytical Chemistry %D 1988 %T Automated synthesis and sequence analysis of biological macromolecules %A L. M. Smith %B Analytical Chemistry %V 60 %P 381A-382A, 384A-390A %@ 0003-2700 %G English %R 10.1021/ac00157a717 %0 Journal Article %J Genet. Eng. (N. Y.) %D 1988 %T Fluorescence-based automated DNA sequence analysis %A L. M. Smith %B Genet. Eng. (N. Y.) %V 10 %P 91-108 %@ 0196-3716 %G English %R 10.1007/978-1-4615-7081-3_5 %0 Journal Article %J BioTechniques %D 1987 %T Approaches to subpicomole protein sequencing %A Kent, S. %A Hood, L. %A Aebersold, R. %A Teplow, D. %A L. M. Smith %A Farnsworth, V. %A Cartier, P. %A Hines, W. %A Hughes, P. %A Dodd, C. %B BioTechniques %V 5 %P 314-321 %8 May-Jun %@ 0736-6205 %G eng %0 Journal Article %J Genomics %D 1987 %T Automated DNA sequencing and analysis of the human genome %A Hood, L. E. %A Hunkapiller, M. W. %A L. M. Smith %B Genomics %V 1 %P 201-12 %@ 0888-7543 %G English %R 10.1016/0888-7543(87)90046-2 %0 Journal Article %J BioTechniques %D 1987 %T Automated DNA-Sequence Analysis %A Connell, C. %A Fung, S. %A Heiner, C. %A Bridgham, J. %A Chakerian, V. %A Heron, E. %A Jones, B. %A Menchen, S. %A Mordan, W. %A Raff, M. %A Recknor, M. %A L. M. Smith %A Springer, J. %A Woo, S. %A Hunkapiller, M. %B BioTechniques %V 5 %P 342-& %8 May-Jun %@ 0736-6205 %G eng %0 Journal Article %J Bio/Technology %D 1987 %T Mapping and sequencing the human genome: how to proceed %A L. M. Smith %A Hood, Leroy %B Bio/Technology %V 5 %P 933-9 %@ 0733-222X %G English %R 10.1038/nbt0987-933 %0 Journal Article %J Methods in Enzymology %D 1987 %T The synthesis and use of fluorescent oligonucleotides in DNA sequence analysis %A L. M. Smith %A Kaiser, Robert J. %A Sanders, Jane Z. %A Hood, Leroy E. %B Methods in Enzymology %V 155 %P 260-301 %@ 0076-6879 %G English %R 10.1016/0076-6879(87)55021-2 %0 Journal Article %J Nature %D 1986 %T Fluorescence detection in automated DNA sequence analysis %A L. M. Smith %A Sanders, Jane Z. %A Kaiser, Robert J. %A Hughes, Peter %A Dodd, Chris %A Connell, Charles R. %A Heiner, Cheryl %A Kent, Stephen B. H. %A Hood, Leroy E. %B Nature %V 321 %P 674-9 %@ 0028-0836 %G English %R 10.1038/321674a0 %0 Journal Article %J Nucleic Acids Research %D 1985 %T The synthesis of oligonucleotides containing an aliphatic amino group at the 5' terminus: synthesis of fluorescent DNA primers for use in DNA sequence analysis %A L. M. Smith %A Fung, Steven %A Hunkapiller, Michael W. %A Hunkapiller, Tim J. %A Hood, Leroy E. %B Nucleic Acids Research %V 13 %P 2399-412 %@ 0305-1048 %G English %R 10.1093/nar/13.7.2399 %0 Journal Article %J Cancer Research %D 1984 %T Effect of hyperthermia on murine cell surface histocompatibility antigens %A Mehdi, S. Q. %A Recktenwald, D. J. %A L. M. Smith %A Li, G. C. %A Armour, E. P. %A Hahn, G. M. %B Cancer Research %V 44 %P 3394-3397 %@ 0008-5472 %G eng %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences %D 1982 %T Cell surface properties of HLA antigens on Epstein-Barr virus-transformed cell lines %A L. M. Smith %A Petty, H. R. %A Parham, P. %A McConnell, H. M. %B Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences %V 79 %P 608-612 %@ 0027-8424 %G eng %R 10.1073/pnas.79.2.608 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1982 %T H-2Kk and vesicular stomatitis virus G proteins are not extensively associated in reconstituted membranes recognized by T cells %A Cartwright, Gene S. %A L. M. Smith %A Heinzelmann, Eric W. %A Ruebush, Mary J. %A Parce, J. Wallace %A McConnell, Harden M. %B Proceedings of the National Academy of Sciences of the United States of America %V 79 %P 1506-10 %@ 0027-8424 %G English %R 10.1073/pnas.79.5.1506 %0 Journal Article %J Molecular Immunology %D 1982 %T The lateral mobility and surface distribution of Lyt-1, Lyt-2 and Lyt-3 on mouse thymocytes %A Howard, F. D. %A Ledbetter, J. A. %A Carter, D. P. %A L. M. Smith %A McConnell, H. M. %B Molecular Immunology %V 19 %P 1481-1489 %@ 0161-5890 %G eng %R 10.1016/0161-5890(82)90194-8 %0 Journal Article %J Journal of Cell Biology %D 1982 %T Lipid monolayer-coated solid surfaces do not perturb the lateral motion and distribution of C3b receptors on neutrophils %A Hafeman, D. G. %A L. M. Smith %A Fearon, D. T. %A McConnell, H. M. %B Journal of Cell Biology %V 94 %P 224-227 %@ 0021-9525 %G eng %R 10.1083/jcb.94.1.224 %0 Thesis %D 1981 %T The Lateral and Rotational Motion of Membrane Components %A L. M. Smith %I Stanford University %C Ann Arbor %V 8115832 %P 168 p. %8 1981 %G English %9 Ph.D. %0 Journal Article %J Biophysical Journal %D 1981 %T Measurement of rotational motion in membranes using fluorescence recovery after photobleaching %A L. M. Smith %A Weis, Robert M. %A McConnell, Harden M. %B Biophysical Journal %V 36 %P 73-91 %@ 0006-3495 %G English %R 10.1016/s0006-3495(81)84717-0 %0 Journal Article %J Biophysical Journal %D 1981 %T Pattern photobleaching of fluorescent lipid vesicles using polarized laser light %A L. M. Smith %A McConnell, H. M. %A Smith, B. A. %A Parce, J. W. %B Biophysical Journal %V 33 %P 139-146 %@ 0006-3495 %G eng %R 10.1016/S0006-3495(81)84877-1 %0 Journal Article %J Biochemistry %D 1980 %T Lateral diffusion of M-13 coat protein in mixtures of phosphatidylcholine and cholesterol %A L. M. Smith %A Rubenstein, John L. R. %A Parce, J. Wallace %A McConnell, Harden M. %B Biochemistry %V 19 %P 5907-11 %@ 0006-2960 %G English %R 10.1021/bi00566a037 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1980 %T Lateral distribution and diffusion of the C3b receptor of complement, HLA antigens, and lipid probes in peripheral blood leukocytes %A Petty, Howard R. %A L. M. Smith %A Fearon, Douglas T. %A McConnell, Harden M. %B Proceedings of the National Academy of Sciences of the United States of America %V 77 %P 6587-91 %@ 0027-8424 %G English %R 10.1073/pnas.77.11.6587 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1979 %T Antibodies bound to lipid haptens in model membranes diffuse as rapidly as the lipids themselves %A L. M. Smith %A Parce, J. Wallace %A Smith, Barton A. %A McConnell, Harden M. %B Proceedings of the National Academy of Sciences of the United States of America %V 76 %P 4177-9 %@ 0027-8424 %G English %R 10.1073/pnas.76.9.4177 %0 Journal Article %J Biochemistry %D 1979 %T Lateral diffusion of M-13 coat protein in model membranes %A L. M. Smith %A Smith, Barton A. %A McConnell, Harden M. %B Biochemistry %V 18 %P 2256-9 %@ 0006-2960 %G English %R 10.1021/bi00578a019