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S. %B Human Molecular Genetics %V 27 %P 322-337 %8 Jan %@ 0964-6906 %G eng %R 10.1093/hmg/ddx403 %0 Journal Article %J Journal of Proteome Research %D 2018 %T ProForma: A Standard Proteoform Notation %A Leduc, R. D. %A Schwammle, V. %A Shortreed, M. R. %A Cesnik, A. J. %A Solntsev, S. K. %A Shaw, J. B. %A Martin, M. J. %A Vizcaino, J. A. %A Alpi, E. %A Danis, P. %A Kelleher, N. L. %A Smith, L. M. %A Ge, Y. %A Agar, J. N. %A Chamot-Rooke, J. %A Loo, J. A. %A Pasa-Tolic, L. %A Tsybin, Y. O. %B Journal of Proteome Research %V 17 %P 1321-1325 %8 Mar %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.7b00851 %0 Journal Article %J Journal of Proteome Research %D 2018 %T Proteoform Suite: Software for Constructing, Quantifying, and Visualizing Proteoform Families %A Cesnik, A. J. %A Shortreed, M. R. %A Schaffer, L. V. %A Knoener, R. A. %A Frey, B. L. %A Scalf, M. %A Solntsev, S. K. %A Dai, Y. X. %A Gasch, A. P. %A Smith, L. M. %B Journal of Proteome Research %V 17 %P 568-578 %8 Jan %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.7b00685 %0 Journal Article %J Science %D 2018 %T Proteoforms as the next proteomics currency %A Smith, L. M. %A Kelleher, N. L. %B Science %V 359 %P 1106-1107 %8 Mar %@ 0036-8075 %G eng %R 10.1126/science.aat1884 %0 Journal Article %J Plant Cell %D 2018 %T SUMOylome Profiling Reveals a Diverse Array of Nuclear Targets Modified by the SUMO Ligase SIZ1 during Heat Stress %A Rytz, T. C. %A Miller, M. J. %A McLoughlin, F. %A Augustine, R. C. %A Marshall, R. S. %A Juan, Y. T. %A Charng, Y. Y. %A Scalf, M. %A Smith, L. M. %A Vierstra, R. D. %B Plant Cell %V 30 %P 1077-1099 %8 May %@ 1040-4651 %G eng %R 10.1105/tpc.17.00993 %0 Journal Article %J Journal of Proteome Research %D 2018 %T Ultrafast Peptide Label-Free Quantification with FlashLFQ %A Millikin, R. J. %A Solntsev, S. K. %A Shortreed, M. R. %A Smith, L. M. %B Journal of Proteome Research %V 17 %P 386-391 %8 Jan %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.7b00608 %0 Journal Article %J Journal of Proteome Research %D 2017 %T Elucidating Escherichia coil Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database %A Dai, Y. X. %A Shortreed, M. R. %A Scalf, M. %A Frey, B. L. %A Cesnik, A. J. %A Solntsev, S. %A Schaffer, L. V. %A Smith, L. M. %B Journal of Proteome Research %V 16 %P 4156-4165 %8 Nov %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.7b00516 %0 Journal Article %J Journal of Proteome Research %D 2017 %T Elucidating Protein-DNA Interactions in Human Alphoid Chromatin via Hybridization Capture and Mass Spectrometry %A Buxton, K. E. %A Kennedy-Darling, J. %A Shortreed, M. R. %A Zaidan, N. Z. %A Olivier, M. %A Scalf, M. %A Sridharan, R. %A Smith, L. M. %B Journal of Proteome Research %V 16 %P 3433-3442 %8 Sep %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.7b00448 %0 Journal Article %J Scientific Reports %D 2017 %T Elucidating the in vivo interactome of HIV-1 RNA by hybridization capture and mass spectrometry %A Knoener, R. A. %A Becker, J. T. %A Scalf, M. %A Sherer, N. M. %A Smith, L. M. %K cooperative binding %K gene-expression %K genomic rna %K hnrnp a1 %K immunodeficiency-virus type-1 %K pre-messenger-rna %K saccharomyces-cerevisiae %K t-cells %K unexpected roles %K viral protein expression %X HIV-1 replication requires myriad interactions between cellular proteins and the viral unspliced RNA. These interactions are important in archetypal RNA processes such as transcription and translation as well as for more specialized functions including alternative splicing and packaging of unspliced genomic RNA into virions. We present here a hybridization capture strategy for purification of unspliced full-length HIV RNA-protein complexes preserved in vivo by formaldehyde crosslinking, and coupled with mass spectrometry to identify HIV RNA-protein interactors in HIV-1 infected cells. One hundred eighty-nine proteins were identified to interact with unspliced HIV RNA including Rev and Gag/Gag-Pol, 24 host proteins previously shown to bind segments of HIV RNA, and over 90 proteins previously shown to impact HIV replication. Further analysis using siRNA knockdown techniques against several of these proteins revealed significant changes to HIV expression. These results demonstrate the utility of the approach for the discovery of host proteins involved in HIV replication. Additionally, because this strategy only requires availability of 30 nucleotides of the HIV-RNA for hybridization with a capture oligonucleotide, it is readily applicable to any HIV system of interest regardless of cell type, HIV-1 virus strain, or experimental perturbation. %B Scientific Reports %V 7 %8 Dec 5 %@ 2045-2322 %G English %M WOS:000417051000015 %R ARTN 16965
10.1038/s41598-017-16793-5 %0 Journal Article %J J Proteome Res %D 2017 %T Global Post-Translational Modification Discovery %A Li, Q. %A Shortreed, M. R. %A Wenger, C. D. %A Frey, B. L. %A Schaffer, L. V. %A Scalf, M. %A Smith, L. M. %B J Proteome Res %G eng %0 Journal Article %J Molecular Plant %D 2017 %T Mass Spectrometric Analyses Reveal a Central Role for Ubiquitylation in Remodeling the Arabidopsis Proteome during Photomorphogenesis %A Aguilar-Hernandez, V. %A Kim, D. Y. %A Stankey, R. J. %A Scalf, M. %A Smith, L. M. %A Vierstra, R. D. %B Molecular Plant %V 10 %P 846-865 %8 Jun %@ 1674-2052 %G eng %R 10.1016/j.molp.2017.04.008 %0 Journal Article %J Analytical Chemistry %D 2017 %T Multiplexed Sequence-Specific Capture of Chromatin and Mass Spectrometric Discovery of Associated Proteins %A Dai, Yunxiang %A Kennedy-Darling, Julia %A Shortreed, Michael R. %A Scalf, Mark %A Gasch, Audrey P. %A Smith, L. M. %B Analytical Chemistry %V 89 %P 7841-7846 %@ 0003-2700 %G eng %R 10.1021/acs.analchem.7b01784 %0 Journal Article %J Chembiochem %D 2017 %T Parallel DNA Synthesis on Poly(ethylene terephthalate) %A Holden, M. T. %A Carter, M. C. D. %A Ting, S. K. %A Lynn, D. M. %A Smith, L. M. %B Chembiochem %V 18 %P 1914-1916 %8 Oct %@ 1439-4227 %G eng %2 PMC5644289 %R 10.1002/cbic.201700321 %0 Journal Article %J Bmc Genomics %D 2017 %T Proteomics in non-human primates: utilizing RNA-Seq data to improve protein identification by mass spectrometry in vervet monkeys %A Proffitt, J. M. %A Glenn, J. %A Cesnik, A. J. %A Jadhav, A. %A Shortreed, M. R. %A Smith, L. M. %A Kavanagh, K. %A Cox, L. A. %A Olivier, M. %B Bmc Genomics %V 18 %8 Nov %@ 1471-2164 %G eng %] 877 %R 10.1186/s12864-017-4279-0 %0 Journal Article %J Journal of Proteome Research %D 2016 %T Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements %A Shortreed, M. R. %A Frey, B. L. %A Scalf, M. %A Knoener, R. A. %A Cesnik, A. J. %A L. M. Smith %B Journal of Proteome Research %V 15 %P 1213-1221 %8 Apr %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.5b01090 %0 Journal Article %J Journal of Proteome Research %D 2016 %T Human Proteomic Variation Revealed by Combining RNA-Seq Proteogenomics and Global Post-Translational Modification (G-PTM) Search Strategy %A Cesnik, A. J. %A Shortreed, M. R. %A Sheynkman, G. M. %A Frey, B. L. %A Smith, L. M. %B Journal of Proteome Research %V 15 %P 800-808 %8 Mar %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.5b00817 %0 Journal Article %J Genomics %D 2016 %T HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae %A Guillen-Ahlers, H. %A Rao, P. K. %A Levenstein, M. E. %A Kennedy-Darling, J. %A Perumalla, D. S. %A Jadhav, A. Y. %A Glenn, J. P. %A Ludwig-Kubinski, A. %A Drigalenko, E. %A Montoya, M. J. %A Goring, H. H. %A Anderson, C. D. %A Scalf, M. %A Gildersleeve, H. I. %A Cole, R. %A Greene, A. M. %A Oduro, A. K. %A Lazarova, K. %A Cesnik, A. J. %A Barfknecht, J. %A Cirillo, L. A. %A Gasch, A. P. %A Shortreed, M. R. %A Smith, L. M. %A Olivier, M. %B Genomics %V 107 %P 267-273 %G eng %0 Journal Article %J Proteomics %D 2016 %T Morpheus Spectral Counter: A computational tool for label-free quantitative mass spectrometry using the Morpheus search engine %A Gemperline, D. C. %A Scalf, M. %A Smith, L. M. %A Vierstra, R. D. %B Proteomics %V 16 %P 920-924 %G eng %9 Article %R 10.1002/pmic.201500420 %0 Journal Article %J Elife %D 2016 %T POWERDRESS interacts with HISTONE DEACETYLASE 9 to promote aging in Arabidopsis %A Chen, X. %A Lu, L. %A Mayer, K. S. %A Scalf, M. %A Qian, S. %A Lomax, A. %A Smith, L. M. %A Zhong, X. %B Elife %V 5 %G eng %0 Journal Article %J Biomaterials %D 2016 %T Protein turnover during in vitro tissue engineering %A Li, Q. Y. %A Chang, Z. %A Oliveira, G. %A Xiong, M. %A L. M. Smith %A Frey, B. L. %A Welham, N. V. %B Biomaterials %V 81 %P 104-113 %8 Mar %@ 0142-9612 %G eng %R 10.1016/j.biomaterials.2015.12.004 %0 Book Section %D 2016 %T Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation %A Sheynkman, G. M. %A Shortreed, M. R. %A Cesnik, A. J. %A Smith, L. M. %E Bohn, P. W. %E Pemberton, J. E. %S Annual Review of Analytical Chemistry %I Annual Reviews %C Palo Alto %V 9 %P 521-545 %@ 1936-1327
978-0-8243-4409-2 %G English %M WOS:000379328100023 %R 10.1146/annurev-anchem-071015-041722 %0 Journal Article %J Biomaterials %D 2016 %T Proteomic analysis of naturally-sourced biological scaffolds %A Li, Q. Y. %A Uygun, B. E. %A Geerts, S. %A Ozer, S. %A Scalf, M. %A Gilpin, S. E. %A Ott, H. C. %A Yarmush, M. L. %A L. M. Smith %A Welham, N. V. %A Frey, B. L. %B Biomaterials %V 75 %P 37-46 %8 Jan %@ 0142-9612 %G eng %] Ber s, 1995, journal of cell biology, v131, p1083 %R 10.1016/j.biomaterials.2015.10.011 %0 Journal Article %J PLoS Genet %D 2016 %T The Transcription Factor Nfatc2 Regulates β-Cell Proliferation and Genes Associated with Type 2 Diabetes in Mouse and Human Islets %A Keller, M. P. %A Paul, P. K. %A Rabaglia, M. E. %A Stapleton, D. S. %A Schueler, K. L. %A Broman, A. T. %A Ye, S. I. %A Leng, N. %A Brandon, C. J. %A Neto, E. C. %A Plaisier, C. L. %A Simonett, S. P. %A Kebede, M. A. %A Sheynkman, G. M. %A Klein, M. A. %A Baliga, N. S. %A Smith, L. M. %A Broman, K. W. %A Yandell, B. S. %A Kendziorski, C. %A Attie, A. D. %B PLoS Genet %V 12 %G eng %N e1006466 %0 Journal Article %J Science Translational Medicine %D 2015 %T Bioengineered vocal fold mucosa for voice restoration %A Ling, C. Y. %A Li, Q. Y. %A Brown, M. E. %A Kishimoto, Y. %A Toya, Y. %A Devine, E. E. %A Choi, K. O. %A Nishimoto, K. %A Norman, I. G. %A Tsegyal, T. %A Jiang, J. J. %A Burlingham, W. J. %A Gunasekaran, S. %A L. M. Smith %A Frey, B. L. %A Welham, N. V. %B Science Translational Medicine %V 7 %8 Nov %@ 1946-6234 %G eng %] 314ra187 %R 10.1126/scitranslmed.aab4014 %0 Journal Article %J Annu. Rev. Anal. Chem. %D 2015 %T Carbon Substrates: A Stable Foundation for Biomolecular Arrays %A Lockett, Matthew R. %A L. M. Smith %B Annu. Rev. Anal. Chem. %V 8 %P 263-285 %@ 1936-1327 %G eng %R 10.1146/annurev-anchem-071114-040146 %0 Journal Article %J Journal of Biological Chemistry %D 2015 %T Formaldehyde Crosslinking: A Tool for the Study of Chromatin Complexes %A Hoffman, E. A. %A Frey, B. L. %A L. M. Smith %A Auble, D. T. %B Journal of Biological Chemistry %V 290 %P 26404-26411 %8 Oct %@ 0021-9258 %G eng %R 10.1074/jbc.R115.651679 %0 Journal Article %J Journal of Proteome Research %D 2015 %T Global Identification of Protein Post-translational Modifications in a Single-Pass Database Search %A Shortreed, M. R. %A Wenger, C. D. %A Frey, B. L. %A Sheynkman, G. M. %A Scalf, M. %A Keller, M. P. %A Attie, A. D. %A L. M. Smith %B Journal of Proteome Research %V 14 %P 4714-4720 %8 Nov %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.5b00599 %0 Journal Article %J Analytical Chemistry %D 2015 %T Photolithographic Synthesis of High-Density DNA and RNA Arrays on Flexible, Transparent, and Easily Subdivided Plastic Substrates %A Holden, M. T. %A Carter, M. C. D. %A Wu, C. H. %A Wolfer, J. %A Codner, E. %A Sussman, M. R. %A Lynn, D. M. %A L. M. Smith %B Analytical Chemistry %V 87 %P 11420-11428 %8 Nov %@ 0003-2700 %G eng %R 10.1021/acs.analchem.5b02893 %0 Journal Article %J Physiological Genomics %D 2014 %T Advanced methods for the analysis of chromatin-associated proteins %A Guillen-Ahlers, H. %A Shortreed, M. R. %A L. M. Smith %A Olivier, M. %B Physiological Genomics %V 46 %P 441-447 %8 Jul %@ 1094-8341 %G eng %2 PMC4080278 %R 10.1152/physiolgenomics.00041.2014 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2014 %T Detection of Large Ions in Time-of-Flight Mass Spectrometry: Effects of Ion Mass and Acceleration Voltage on Microchannel Plate Detector Response %A Liu, R. R. %A Li, Q. Y. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 25 %P 1374-1383 %8 Aug %@ 1044-0305 %G eng %2 PMC4108536 %R 10.1007/s13361-014-0903-2 %0 Journal Article %J Journal of Proteome Research %D 2014 %T Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae %A Kennedy-Darling, J. %A Guillen-Ahlers, H. %A Shortreed, M. R. %A Scalf, M. %A Frey, B. L. %A Kendziorski, C. %A Olivier, M. %A Gasch, A. P. %A L. M. Smith %B Journal of Proteome Research %V 13 %P 3810-3825 %8 Aug %@ 1535-3893 %G eng %2 PMC4123949 %R 10.1021/pr5004938 %0 Journal Article %J Journal of Proteome Research %D 2014 %T Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework %A Jagtap, P. D. %A Johnson, J. E. %A Onsongo, G. %A Sadler, F. W. %A Murray, K. %A Wang, Y. B. %A Shenykrnan, G. M. %A Bandhakavi, S. %A L. M. Smith %A Griffin, T. J. %B Journal of Proteome Research %V 13 %P 5898-5908 %8 Dec %@ 1535-3893 %G English %9 Article %R 10.1021/pr500812t %0 Journal Article %J Journal of Proteome Research %D 2014 %T Large-Scale Mass Spectrometric Detection of Variant Peptides Resulting from Nonsynonymous Nucleotide Differences %A Sheynkman, Gloria M. %A Shortreed, Michael R. %A Frey, Brian L. %A Scalf, Mark %A L. M. Smith %B Journal of Proteome Research %V 13 %P 228-240 %@ 1535-3893 %G English %R 10.1021/pr4009207 %0 Journal Article %J Analytical Chemistry %D 2014 %T Measuring the Formaldehyde Protein-DNA Cross-Link Reversal Rate %A Kennedy-Darling, Julia %A L. M. Smith %B Analytical Chemistry %V 86 %P 5678-5681 %@ 0003-2700 %G English %R 10.1021/ac501354y %0 Journal Article %J Biochemical and Biophysical Research Communications %D 2014 %T Methylation of yeast ribosomal protein S2 is elevated during stationary phase growth conditions %A Ladror, D. T. %A Frey, B. L. %A Scalf, M. %A Levenstein, M. E. %A Artymiuk, J. M. %A L. M. Smith %B Biochemical and Biophysical Research Communications %V 445 %P 535-541 %8 Mar %@ 0006-291X %G English %9 Article %R 10.1016/j.bbrc.2014.01.040 %0 Journal Article %J Chembiochem %D 2014 %T Multiplexed Programmable Release of Captured DNA %A Kennedy-Darling, J. %A Holden, M. T. %A Shortreed, M. R. %A L. M. Smith %B Chembiochem %V 15 %P 2353-2356 %8 Nov %@ 1439-4227 %G English %9 Article %R 10.1002/cbic.201402343 %0 Journal Article %J Analytical Chemistry %D 2014 %T Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics %A Rhoads, T. W. %A Rose, C. M. %A Bailey, D. J. %A Riley, N. M. %A Molden, R. C. %A Nestler, A. J. %A Merrill, A. E. %A L. M. Smith %A Hebert, A. S. %A Westphall, M. S. %A Pagliarini, D. J. %A Garcia, B. A. %A Coon, J. J. %B Analytical Chemistry %V 86 %P 2314-2319 %8 Mar %@ 0003-2700 %G English %9 Article %R 10.1021/ac403579s %0 Journal Article %J Plant Cell %D 2013 %T Advanced Proteomic Analyses Yield a Deep Catalog of Ubiquitylation Targets in Arabidopsis %A Kim, D. Y. %A Scalf, M. %A L. M. Smith %A Vierstra, R. D. %B Plant Cell %V 25 %P 1523-1540 %8 May %@ 1040-4651 %G English %9 Article %2 PMC3694690 %R 10.1105/tpc.112.108613 %0 Journal Article %J Plos One %D 2013 %T Characterization and Quantification of Intact 26S Proteasome Proteins by Real-Time Measurement of Intrinsic Fluorescence Prior to Top-down Mass Spectrometry %A Russell, J. D. %A Scalf, M. %A Book, A. J. %A Ladror, D. T. %A Vierstra, R. D. %A L. M. Smith %A Coon, J. J. %B Plos One %V 8 %8 Mar %@ 1932-6203 %G eng %2 PMC3594244 %] e58157 %R 10.1371/journal.pone.0058157 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2013 %T Chemical Derivatization of Peptide Carboxyl Groups for Highly Efficient Electron Transfer Dissociation %A Frey, B. L. %A Ladror, D. T. %A Sondalle, S. B. %A Krusemark, C. J. %A Jue, A. L. %A Coon, J. J. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 24 %P 1710-1721 %8 Nov %@ 1044-0305 %G English %9 Article %2 PMC3827969 %R 10.1007/s13361-013-0701-2 %0 Journal Article %J Molecular & Cellular Proteomics %D 2013 %T Discovery and Mass Spectrometric Analysis of Novel Splice-junction Peptides Using RNA-Seq %A Sheynkman, G. M. %A Shortreed, M. R. %A Frey, B. L. %A L. M. Smith %B Molecular & Cellular Proteomics %V 12 %P 2341-2353 %8 Aug %@ 1535-9476 %G English %9 Article %R 10.1074/mcp.O113.028142 %0 Journal Article %J ACS Applied Materials & Interfaces %D 2013 %T Fabrication of Oligonucleotide and Protein Arrays on Rigid and Flexible Substrates Coated with Reactive Polymer Multilayers %A Broderick, A. H. %A Carter, M. C. D. %A Lockett, M. R. %A L. M. Smith %A Lynn, D. M. %B ACS Applied Materials & Interfaces %V 5 %P 351-359 %8 Jan %@ 1944-8244 %G eng %2 PMC3553252 %R 10.1021/am302285n %0 Journal Article %J Molecules %D 2013 %T Multiplexed Analysis of Cage and Cage Free Chicken Egg Fatty Acids Using Stable Isotope Labeling and Mass Spectrometry %A Torde, R. G. %A Therrien, A. J. %A Shortreed, M. R. %A L. M. Smith %A Lamos, S. M. %B Molecules %V 18 %P 14977-14988 %8 Dec %@ 1420-3049 %G English %9 Article %R 10.3390/molecules181214977 %0 Journal Article %J Nature Methods %D 2013 %T Proteoform: a single term describing protein complexity %A L. M. Smith %A Kelleher, N. L. %A Ge, Y. %A Consortium Top Down, Proteomics %B Nature Methods %V 10 %P 186-187 %8 Mar %@ 1548-7091 %G eng %R 10.1038/nmeth.2369 %0 Journal Article %J Biomaterials %D 2013 %T Proteomic analysis of a decellularized human vocal fold mucosa scaffold using 2D electrophoresis and high-resolution mass spectrometry %A Welham, N. V. %A Chang, Z. %A L. M. Smith %A Frey, B. L. %B Biomaterials %V 34 %P 669-676 %8 Jan %@ 0142-9612 %G eng %2 PMC3496020 %R 10.1016/j.biomaterials.2012.09.050 %0 Journal Article %J Molecular & Cellular Proteomics %D 2013 %T Quantitative Proteomics Reveals Factors Regulating RNA Biology as Dynamic Targets of Stress-induced SUMOylation in Arabidopsis %A Miller, M. J. %A Scalf, M. %A Rytz, T. C. %A Hubler, S. L. %A L. M. Smith %A Vierstra, R. D. %B Molecular & Cellular Proteomics %V 12 %P 449-463 %8 Feb %@ 1535-9476 %G eng %2 PMC3567865 %R 10.1074/mcp.M112.025056 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2012 %T Absolute Quantification of Prion Protein (90-231) Using Stable Isotope-Labeled Chymotryptic Peptide Standards in a LC-MRM AQUA Workflow %A Sturm, R. %A Sheynkman, G. %A Booth, C. %A L. M. Smith %A Pedersen, J. A. %A Li, L. J. %B Journal of the American Society for Mass Spectrometry %V 23 %P 1522-1533 %8 Sep %@ 1044-0305 %G eng %2 PMC3579656 %R 10.1007/s13361-012-0411-1 %0 Journal Article %J Chemistry of Materials %D 2012 %T In situ Synthesis of Oligonucleotide Arrays on Surfaces Coated with Crosslinked Polymer Multilayers %A Broderick, A. H. %A Lockett, M. R. %A Buck, M. E. %A Yuan, Y. %A L. M. Smith %A Lynn, D. M. %B Chemistry of Materials %V 24 %P 938-945 %8 Mar %@ 0897-4756 %G English %9 Article %2 PMC3352262 %R 10.1021/cm202720q %0 Journal Article %J Angewandte Chemie-International Edition %D 2012 %T RNA-Mediated Gene Assembly from DNA Arrays %A Wu, C. H. %A Lockett, M. R. %A L. M. Smith %B Angewandte Chemie-International Edition %V 51 %P 4628-4632 %@ 1433-7851 %G English %9 Article %2 PMC3422211 %R 10.1002/anie.201109058 %0 Book Section %D 2011 %T Complete Chemical Modification of Amine and Acid Functional Groups of Peptides and Small Proteins %A Krusemark, Casey J. %A Frey, Brian L. %A L. M. Smith %A Belshaw, Peter J. %E Gevaert, K. %E Vandekerckhove, J. %S Methods in Molecular Biology %V 753 %P 77-91 %@ 1064-3745
978-1-61779-147-5 %G eng %R 10.1007/978-1-61779-148-2_6 %0 Journal Article %J Journal of Proteome Research %D 2011 %T Discovery of Neuropeptides in the Nematode Ascaris suum by Database Mining and Tandem Mass Spectrometry %A Jarecki, Jessica L. %A Frey, Brian L. %A L. M. Smith %A Stretton, Antony O. %B Journal of Proteome Research %V 10 %P 3098-3106 %8 Jul %G eng %2 PMC3128658 %R 10.1021/pr2001176 %F ISI 2011 07 21 %0 Journal Article %J Environmental Science & Technology %D 2011 %T Hydroxycarboxylic Acid-Derived Organosulfates: Synthesis, Stability, and Quantification in Ambient Aerosol %A Olson, Corey N. %A Galloway, Melissa M. %A Yu, Ge %A Hedman, Curtis J. %A Lockett, Matthew R. %A Yoon, T. P. %A Stone, Elizabeth A. %A L. M. Smith %A Keutsch, F. N. %B Environmental Science & Technology %V 45 %P 6468-6474 %8 Aug %G eng %R 10.1021/es201039p %F ISI 2011 08 10 %0 Journal Article %J Nano Letters %D 2011 %T A Mechanical Nanomembrane Detector for Time-of-Flight Mass Spectrometry %A Park, Jonghoo %A Qin, Hua %A Scalf, Mark %A Hilger, Ryan T. %A Westphall, Michael S. %A L. M. Smith %A Blick, Robert H. %B Nano Letters %V 11 %P 3681-3684 %8 Sep %G eng %R 10.1021/nl201645u %F ISI 2011 10 20 %0 Journal Article %J Analytical Chemistry %D 2011 %T Parallel Detection of Intrinsic Fluorescence from Peptides and Proteins for Quantification during Mass Spectrometric Analysis %A Russell, Jason D. %A Hilger, Ryan T. %A Ladror, Daniel T. %A Tervo, Mark A. %A Scalf, Mark %A Shortreed, Michael R. %A Coon, J. J. %A L. M. Smith %B Analytical Chemistry %V 83 %P 2187-2193 %8 Mar %G eng %2 PMC3056920 %R 10.1021/ac103023q %F ISI 2011 03 25 %0 Journal Article %J Journal of Proteomics %D 2011 %T Quantitative proteomic analysis of the chemolithoautotrophic bacterium Nitrosomonas europaea: Comparison of growing- and energy-starved cells %A Pellitteri-Hahn, M. C. %A Halligan, B. D. %A Scalf, M. %A L. M. Smith %A Hickey, W. J. %B Journal of Proteomics %V 74 %P 411-419 %8 Apr %@ 1874-3919 %G eng %R 10.1016/j.jprot.2010.12.003 %0 Journal Article %J Plos One %D 2011 %T Sequence-Specific Capture of Protein-DNA Complexes for Mass Spectrometric Protein Identification %A Wu, C. H. %A Chen, S. Y. %A Shortreed, M. R. %A Kreitinger, G. M. %A Yuan, Y. %A Frey, B. L. %A Zhang, Y. %A Mirza, S. %A Cirillo, L. A. %A Olivier, M. %A L. M. Smith %B Plos One %V 6 %8 Oct %@ 1932-6203 %G eng %2 PMC3197616 %] e26217 %R 10.1371/journal.pone.0026217 %0 Journal Article %J Molecular Cell %D 2011 %T Sirt3 Promotes the Urea Cycle and Fatty Acid Oxidation during Dietary Restriction %A Hallows, William C. %A Yu, Wei %A Smith, Brian C. %A Devires, Mark K. %A Ellinger, James J. %A Someya, Shinichi %A Shortreed, Michael R. %A Prolla, Tomas %A Markley, John L. %A L. M. Smith %A Zhao, Shimin %A Guan, Kun-Liang %A Denu, John M. %B Molecular Cell %V 41 %P 139-149 %8 Jan %G eng %2 PMC3101115 %R 10.1016/j.molcel.2011.01.002 %F ISI 2011 03 18 %0 Journal Article %J Analyst %D 2011 %T To understand the whole, you must know the parts: unraveling the roles of protein-DNA interactions in genome regulation %A L. M. Smith %A Shortreed, Michael R. %A Olivier, Michael %B Analyst %V 136 %P 3060-3065 %G eng %2 PMC3672230 %R 10.1039/c1an15037e %F ISI 2011 08 03 %0 Journal Article %J Journal of Biological Chemistry %D 2010 %T Affinity Purification of the Arabidopsis 26 S Proteasome Reveals a Diverse Array of Plant Proteolytic Complexes %A Book, Adam J. %A Gladman, Nicholas P. %A Lee, Sang-Sook %A Scalf, Mark %A L. M. Smith %A Vierstra, Richard D. %B Journal of Biological Chemistry %V 285 %P 25554-25569 %8 Aug %G eng %2 PMC2919120 %R 10.1074/jbc.M110.136622 %F ISI 2010 12 31 %0 Journal Article %J Analytical Chemistry %D 2010 %T Alkylating Tryptic Peptides to Enhance Electrospray Ionization Mass Spectrometry Analysis %A Kulevich, Suzanne E. %A Frey, Brian L. %A Kreitinger, Gloria %A L. M. Smith %B Analytical Chemistry %V 82 %P 10135-10142 %8 Dec %G eng %2 PMC3075559 %R 10.1021/ac1019792 %F ISI 2011 01 06 %0 Journal Article %J Journal of Physical Chemistry C %D 2010 %T Formation and Stability of Alkylthiol Monolayers on Carbon Substrates %A Lockett, Matthew R. %A L. M. Smith %B Journal of Physical Chemistry C %V 114 %P 12635-12641 %8 Jul %G eng %2 PMC2917760 %R 10.1021/jp102821x %F 2010 08 06 %0 Journal Article %J Langmuir %D 2010 %T Halogenation of Carbon Substrates for Increased Reactivity with Alkenes %A Lockett, Matthew R. %A L. M. Smith %B Langmuir %V 26 %P 16642-16646 %8 Nov %G eng %R 10.1021/la103050z %F ISI 2010 12 31 %0 Journal Article %J Analytical Chemistry %D 2010 %T Integrated Microfluidic Device for Automated Single Cell Analysis Using Electrophoretic Separation and Electrospray Ionization Mass Spectrometry %A Mellors, J. Scott %A Jorabchi, Kaveh %A L. M. Smith %A Ramsey, J. Michael %B Analytical Chemistry %V 82 %P 967-973 %8 Feb %G eng %R 10.1021/ac902218y %F ISI 2010 02 11 %0 Journal Article %J Nature %D 2010 %T Nanotechnology: Molecular robots on the move %A L. M. Smith %B Nature %V 465 %P 167-168 %8 May %@ 0028-0836 %G eng %R 10.1038/465167a %F ISI 2010 05 20 %0 Journal Article %J Langmuir %D 2009 %T Acyl Chloride-Modified Amorphous Carbon Substrates for the Attachment of Alcohol-, Thiol-, and Amine-Containing Molecules %A Lockett, M. R. %A Carlisle, J. C. %A Le, D. V. %A L. M. Smith %B Langmuir %V 25 %P 5120-5126 %8 May %G eng %2 PMC2824164 %R 10.1021/la804140r %F ISI 2009 05 14 %0 Journal Article %J Langmuir %D 2009 %T Attaching Molecules to Chlorinated and Brominated Amorphous Carbon Substrates via Grignard Reactions %A Lockett, M. R. %A L. M. Smith %B Langmuir %V 25 %P 3340-3343 %8 Mar %G eng %2 PMC2765564 %R 10.1021/la8039626 %F ISI 2009 03 26 %0 Journal Article %J Langmuir %D 2009 %T Controlling Oligonucleotide Surface Density in Light-Directed DNA Array Fabrication %A Chen, S. %A Phillips, M. F. %A Cerrina, F. %A L. M. Smith %B Langmuir %V 25 %P 6570-6575 %8 Jun %G eng %2 PMC2693259 %R 10.1021/la9000297 %F ISI 2009 06 26 %0 Journal Article %J Analytical Chemistry %D 2009 %T Fabrication and Characterization of DNA Arrays Prepared on Carbon-on-Metal Substrates %A Lockett, M. R. %A L. M. Smith %B Analytical Chemistry %V 81 %P 6429-6437 %8 Aug %G eng %2 PMC2797128 %R 10.1021/ac900807q %F ISI 2009 08 13 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2009 %T Modifying the Charge State Distribution of Proteins in Electrospray Ionization Mass Spectrometry by Chemical Derivatization %A Krusemark, C. J. %A Frey, B. L. %A Belshaw, P. J. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 20 %P 1617-1625 %8 Sep %G eng %2 PMC2776692 %R 10.1016/j.jasms.2009.04.017 %F ISI 2009 10 29 %0 Journal Article %J Langmuir %D 2009 %T Photopatterned Thiol Surfaces for Biomolecule Immobilization %A Chen, S. Y. %A L. M. Smith %B Langmuir %V 25 %P 12275-12282 %8 Oct %G eng %2 PMC2768491 %R 10.1021/la9017135 %F ISI 2009 10 23 %0 Journal Article %J Analytical Chemistry %D 2009 %T Rapid Determination of RNA Accessible Sites by Surface Plasmon Resonance Detection of Hybridization to DNA Arrays %A Mandir, Joshua B. %A Lockett, Matthew R. %A Phillips, Margaret F. %A Allawi, Hatim T. %A Lyamichev, Victor I. %A L. M. Smith %B Analytical Chemistry %V 81 %P 8949-8956 %8 Nov %G eng %2 PMC2771317 %R 10.1021/ac9015962 %F ISI 2010 04 15 %0 Journal Article %J Analytical Chemistry %D 2009 %T Single Droplet Separations and Surface Partition Coefficient Measurements Using Laser Ablation Mass Spectrometry %A Jorabchi, K. %A L. M. Smith %B Analytical Chemistry %V 81 %P 9682-9688 %8 Dec %@ 0003-2700 %G eng %2 PMC2911232 %R 10.1021/ac901819r %0 Journal Article %J Plant Journal %D 2009 %T Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis %A Saracco, S. A. %A Hansson, M. %A Scalf, M. %A Walker, J. M. %A L. M. Smith %A Vierstra, R. D. %B Plant Journal %V 59 %P 344-358 %8 Jul %G eng %2 PMC3639010 %R 10.1111/j.1365-313X.2009.03862.x %F ISI 2009 07 17 %0 Journal Article %J Langmuir %D 2008 %T Aldehyde-terminated amorphous carbon substrates for the fabrication of biomolecule arrays %A Lockett, Matthew R. %A Shortreed, Michael R. %A L. M. Smith %B Langmuir %V 24 %P 9198-9203 %8 Sep %G eng %2 PMC2575013 %R 10.1021/la800991t %F ISI 2008 09 12 %0 Journal Article %J Journal of the American Chemical Society %D 2008 %T Carbon-on-metal films for surface plasmon resonance detection of DNA arrays %A Lockett, Matthew R. %A Weibel, Stephen C. %A Phillips, Margaret F. %A Shortreed, Michael R. %A Sun, Bin %A Corn, Robert M. %A Hamers, R. J. %A Cerrina, Franco %A L. M. Smith %B Journal of the American Chemical Society %V 130 %P 8611-8613 %8 Jul %G eng %2 PMC2527731 %R 10.1021/ja802454c %F ISI 2008 07 25 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2008 %T Charge assisted laser desorption/ionization mass spectrometry of droplets %A Jorabchi, K. %A Westphall, M. S. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 19 %P 833-840 %8 Jun %@ 1044-0305 %G eng %2 PMC2488387 %R 10.1016/j.jasms.2008.02.012 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2008 %T Is charge reduction in ESI really necessary? %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 19 %P 629-631 %8 May %G eng %2 PMC2533855 %R 10.1016/j.jasms.2008.02.002 %F ISI 2008 05 30 %0 Journal Article %J Journal of Combinatorial Chemistry %D 2008 %T Exploration of structure - Activity relationships among foldamer ligands for a specific protein binding site via parallel and split-and-mix library synthesis %A Murray, Justin K. %A Sadowsky, Jack D. %A Scalf, Mark %A L. M. Smith %A Tomita, York %A Gellman, S. H. %B Journal of Combinatorial Chemistry %V 10 %P 204-215 %8 Mar-Apr %G eng %R 10.1021/cc700153z %F ISI 2008 03 28 %0 Journal Article %J Analytical Chemistry %D 2008 %T Identification of Cell Surface Markers to Differentiate Rat Endothelial and Fibroblast Cells Using Lectin Arrays and LC-ESI-MS/MS %A Lee, J. E. %A Mirza, S. P. %A Didier, D. N. %A Scalf, M. %A Olivier, M. %A Greene, A. S. %A L. M. Smith %B Analytical Chemistry %V 80 %P 8269-8275 %8 Nov %G eng %2 PMC2950091 %R 10.1021/ac801390b %F ISI 2008 11 27 %0 Journal Article %J Nucleic Acids Research %D 2008 %T In situ oligonucleotide synthesis on carbon materials: stable substrates for microarray fabrication %A Phillips, Margaret F. %A Lockett, Matthew R. %A Rodesch, Matthew J. %A Shortreed, Michael R. %A Cerrina, Franco %A L. M. Smith %B Nucleic Acids Research %V 36 %8 Jan %G eng %2 PMC2248760 %R 10.1093/nar/gkm1103 %F ISI 2008 02 22 %0 Journal Article %J International Journal of Mass Spectrometry %D 2008 %T Ion-ion reactions with fixed-charge modified proteins to produce ions in a single, very high charge state %A Frey, B. L. %A Krusemark, C. J. %A Ledvina, A. R. %A Coon, J. J. %A Belshaw, P. J. %A L. M. Smith %B International Journal of Mass Spectrometry %V 276 %P 136-143 %8 Oct %G eng %2 PMC2598753 %R 10.1016/j.ijms.2008.07.029 %F ISI 2008 11 06 %0 Journal Article %J Analytical Chemistry %D 2008 %T Mass spectrometry of acoustically levitated droplets %A Westphall, Michael S. %A Jorabchi, Kaveh %A L. M. Smith %B Analytical Chemistry %V 80 %P 5847-5853 %8 Aug %G eng %2 PMC2561267 %R 10.1021/ac800317f %F ISI 2008 08 15 %0 Journal Article %J Analytical Chemistry %D 2008 %T Membrane protein separation and analysis by supercritical fluid chromatography-mass spectrometry %A Zhang, Xu %A Scalf, Mark %A Westphall, Michael S. %A L. M. Smith %B Analytical Chemistry %V 80 %P 2590-2598 %8 Apr %G eng %R 10.1021/ac702319u %F ISI 2008 04 18 %0 Journal Article %J Endothelium-Journal of Endothelial Cell Research %D 2008 %T Revealing the role of phosphatidylserine in shear stress-mediated protection in endothelial cells %A Freed, Julie K. %A Shortreed, Michael R. %A Kleefisch, Christopher J. %A L. M. Smith %A Greene, Andrew S. %B Endothelium-Journal of Endothelial Cell Research %V 15 %P 225-230 %G eng %2 PMC2579788 %R 10.1080/10623320802228849 %F ISI 2008 08 15 %0 Journal Article %J Stem Cells %D 2008 %T Secreted Proteoglycans Directly Mediate Human Embryonic Stem Cell-Basic Fibroblast Growth Factor 2 Interactions Critical for Proliferation %A Levenstein, M. E. %A Berggren, W. T. %A Lee, J. E. %A Conard, K. R. %A Llanas, R. A. %A Wagner, R. J. %A L. M. Smith %A Thomson, J. A. %B Stem Cells %S 26 %I ALPHAMED PRESS; 318 BLACKWELL ST, STE 260, DURHAM, NC 27701-2884 USA %V 26 %P 3099-3107 %G eng %R 10.1634/stemcells.2007-1056 %F ISI 1009 01 15 %0 Journal Article %J Langmuir %D 2008 %T A tetrafluorophenyl activated ester self-assembled monolayer for the immobilization of amine-modified oligonucleotides %A Lockett, Matthew R. %A Phillips, Margaret F. %A Jarecki, Jessica L. %A Peelen, Dora %A L. M. Smith %B Langmuir %V 24 %P 69-75 %8 Jan %G eng %2 PMC2533856 %R 10.1021/la702493u %0 Journal Article %J Analytical Chemistry %D 2007 %T Analysis of cell surface carbohydrate expression patterns in normal and tumorigenic human breast cell lines using lectin arrays %A Chen, S. Y. %A Zheng, T. %A Shortreed, M. R. %A Alexander, C. %A L. M. Smith %B Analytical Chemistry %V 79 %P 5698-5702 %8 Aug %@ 0003-2700 %G eng %2 PMC2529168 %R 10.1021/ac070423k %0 Journal Article %J Analytical Biochemistry %D 2007 %T Characterization of vascular endothelial growth factor receptors on the endothelial cell surface during hypoxia using whole cell binding arrays %A Lee, Ji Eun %A Didier, Damela N. %A Lockett, Matthew R. %A Scalf, Mark %A Greene, Andrew S. %A Olivier, Michael %A L. M. Smith %B Analytical Biochemistry %V 369 %P 241-247 %8 Oct %G eng %2 PMC2706495 %R 10.1016/j.ab.2007.06.010 %F ISI 2007 10 19 %0 Journal Article %J Analytical Chemistry %D 2007 %T Controlling charge on levitating drops %A Hilger, R. T. %A Westphal, M. S. %A L. M. Smith %B Analytical Chemistry %V 79 %P 6027-6030 %8 Aug %@ 0003-2700 %G eng %R 10.1021/ac070413j %0 Journal Article %J Nanotechnology %D 2007 %T Field emission from a single nanomechanical pillar %A Kim, Hyun S. %A Qin, Hua %A Westphall, Michael S. %A L. M. Smith %A Blick, Robert H. %B Nanotechnology %V 18 %8 Feb %G eng %R 10.1088/0957-4484/18/6/065201 %F ISI 2007 02 23 %0 Journal Article %J Biomedical Microdevices %D 2007 %T Lectin-modified microchannels for mammalian cell capture and purification %A Zheng, Ting %A Yu, Hongmei %A Alexander, Caroline M. %A Beebe, David J. %A L. M. Smith %B Biomedical Microdevices %V 9 %P 611-617 %8 Aug %G eng %R 10.1007/s10544-007-9074-2 %F ISI 2007 09 14 %0 Journal Article %J Analytical Chemistry %D 2007 %T Molecular beacon-style hybridization assay for quantitative analysis of surface invasive cleavage reactions %A Lockett, M. R. %A Shortreed, M. R. %A L. M. Smith %B Analytical Chemistry %V 79 %P 6031-6036 %8 Aug %@ 0003-2700 %G eng %R 10.1021/ac070424c %0 Journal Article %J Analytical Chemistry %D 2007 %T Relative quantification of carboxylic acid metabolites by liquid chromatography - Mass spectrometry using isotopic variants of cholamine %A Lamos, Shane M. %A Shortreed, Michael R. %A Frey, Brian L. %A Belshaw, Peter J. %A L. M. Smith %B Analytical Chemistry %V 79 %P 5143-5149 %8 Jul %G eng %R 10.1021/ac062416m %F ISI 2007 09 14 %0 Journal Article %J Applied Physics Letters %D 2007 %T Subthreshold field emission from thin silicon membranes %A Qin, H. %A Kim, H. S. %A Blick, R. H. %A Westphall, M. S. %A L. M. Smith %B Applied Physics Letters %V 91 %8 Oct %@ 0003-6951 %G eng %] 183506 %R 10.1063/1.2805015 %0 Journal Article %J Langmuir %D 2006 %T Covalent Photochemical Functionalization of Amorphous Carbon Thin Films for Integrated Real-Time Biosensing %A Sun, Bin %A Colavita, Paula E. %A Kim, Heesuk %A Lockett, Matthew %A Marcus, Matthew S. %A L. M. Smith %A Hamers, R. J. %B Langmuir %V 22 %P 9598-9605 %@ 0743-7463 %G English %R 10.1021/la061749b %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2006 %T Identification of mammalian cell lines using MALDI-TOF and LC-ESI-MS/MS mass spectrometry %A Zhang, X. %A Scalf, M. %A Berggren, T. W. %A Westphall, M. S. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 17 %P 490-499 %8 Apr %G eng %R 10.1016/j.jasms.2005.12.007 %F ISI 2006 week 19 %0 Journal Article %J Analytical Chemistry %D 2006 %T Ionizable isotopic labeling reagent for relative quantification of amine metabolites by mass spectrometry %A Shortreed, M. R. %A Lamos, S. M. %A Frey, B. L. %A Phillips, M. F. %A Patel, M. %A Belshaw, P. J. %A L. M. Smith %B Analytical Chemistry %V 78 %P 6398-6403 %8 Sep %G eng %R 10.1021/ac0607008 %F ISI 2006 09 29 %0 Journal Article %J Angewandte Chemie-International Edition %D 2006 %T Mixed isotope photoaffinity reagents for identification of small-molecule targets by mass spectrometry %A Lamos, S. M. %A Krusemark, C. J. %A McGee, C. J. %A Scalf, M. %A L. M. Smith %A Belshaw, P. J. %B Angewandte Chemie-International Edition %V 45 %P 4329-4333 %@ 1433-7851 %G eng %R 10.1002/anie.200600743 %0 Journal Article %J Nature %D 2006 %T Nanostructures - The manifold faces of DNA %A L. M. Smith %B Nature %V 440 %P 283-284 %8 Mar 16 %G eng %R 10.1038/440283a %F ISI 2006 week 14 %0 Journal Article %J Analytical Chemistry %D 2006 %T Quantitative detection of individual cleaved DNA molecules on surfaces using gold nanoparticles and scanning electron microscope imaging %A Nie, B. %A Shortreed, M. R. %A L. M. Smith %B Analytical Chemistry %V 78 %P 1528-1534 %8 Mar 1 %G eng %2 PMC2533858 %R 10.1021/ac052067g %F ISI 2006 week 14 %0 Journal Article %J Journal of Proteome Research %D 2006 %T Specific capture of mammalian cells by cell surface receptor binding to ligand immobilized on gold thin films %A Peelen, D. %A Kodoyianni, V. %A Lee, J. %A Zheng, T. %A Shortreed, M. R. %A L. M. Smith %B Journal of Proteome Research %V 5 %P 1580-1585 %8 Jul %G eng %2 PMC2586825 %R 10.1021/pr050467e %0 Journal Article %J American Journal of Physiology - Endocrinology & Metabolism %D 2005 %T alpha-Ketoisocaproate-induced hypersecretion of insulin by islets from diabetes-susceptible mice %A Rabaglia, M. E. %A Gray-Keller, M. P. %A Frey, B. L. %A Shortreed, M. R. %A L. M. Smith %A Attie, A. D. %B American Journal of Physiology - Endocrinology & Metabolism %V 289 %P E218-E224 %8 Aug %G eng %R 10.1152/ajpendo.00573.2004 %F ISI 2005 week 32 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 2005 %T Controlling gas-phase reactions for efficient charge reduction electrospray mass spectrometry of intact proteins %A Frey, B. L. %A Lin, Y. %A Westphall, M. S. %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 16 %P 1876-1887 %8 Nov %G eng %2 PMC1489883 %R 10.1016/j.jasms.2005.07.019 %F ISI 2005 week 49 %0 Journal Article %J Journal of the American Chemical Society %D 2005 %T Efficient synthesis of a beta-peptide combinatorial library with microwave irradiation %A Murray, J. K. %A Farooqi, B. %A Sadowsky, J. D. %A Scalf, M. %A Freund, W. A. %A L. M. Smith %A Chen, J. D. %A Gellman, S. H. %B Journal of the American Chemical Society %V 127 %P 13271-13280 %8 Sep 28 %G eng %R 10.1021/ja052733v %F ISI 2005 week 43 %0 Journal Article %J Langmuir %D 2005 %T Immobilization of amine-modified oligonucleotides on aldehyde-terminated alkanethiol monolayers on gold %A Peelen, D. %A L. M. Smith %B Langmuir %V 21 %P 266-271 %8 Jan 4 %G eng %R 10.1021/la048166r %F ISI 2005 week 07 %0 Journal Article %J Journal of the American Chemical Society %D 2005 %T Lectin arrays for profiling cell surface carbohydrate expression %A Zheng, T. %A Peelen, D. %A L. M. Smith %B Journal of the American Chemical Society %V 127 %P 9982-9983 %8 Jul 20 %G eng %R 10.1021/ja0505550 %F ISI 2005 week 34 %0 Journal Article %J Analytical Chemistry %D 2005 %T Parallel single nucleotide polymorphism genotyping by surface invasive cleavage with universal detection %A Chen, Y. %A Shortreed, M. R. %A Olivier, M. %A L. M. Smith %B Analytical Chemistry %V 77 %P 2400-2405 %8 Apr 15 %G eng %R 10.1021/ac0483825 %F ISI 2005 week 20 %0 Journal Article %J Analytical Chemistry %D 2005 %T Scoring single-nucleotide polymorphisms at the single-molecule level by counting individual DNA cleavage events on surfaces %A Nie, B. %A Shortreed, M. R. %A L. M. Smith %B Analytical Chemistry %V 77 %P 6594-6600 %8 Oct 15 %G eng %R 10.1021/ac051025p %F ISI 2005 week 47 %0 Journal Article %J Nucleic Acids Research %D 2005 %T A thermodynamic approach to designing structure-free combinatorial DNA word sets %A Shortreed, M. R. %A Chang, S. B. %A Hong, D. G. %A Phillips, M. %A Campion, B. %A Tulpan, D. C. %A Andronescu, M. %A Condon, A. %A Hoos, H. H. %A L. M. Smith %B Nucleic Acids Research %V 33 %P 4965-4977 %G eng %2 PMC1199559 %R 10.1093/nar/gki812 %F ISI 2005 week 42 %0 Journal Article %J Nucleic Acids Research %D 2005 %T Thermodynamically based DNA strand design %A Tulpan, D. %A Andronescu, M. %A Chang, S. B. %A Shortreed, M. R. %A Condon, A. %A Hoos, H. H. %A L. M. Smith %B Nucleic Acids Research %V 33 %P 4951-4964 %G eng %R 10.1093/nar/gki773 %F ISI 2005 week 42 %0 Journal Article %J Plant Physiology %D 2005 %T Tripeptidyl peptidase II. An oligomeric protease complex from Arabidopsis %A Book, A. J. %A Yang, P. Z. %A Scalf, M. %A L. M. Smith %A Vierstra, R. D. %B Plant Physiology %V 138 %P 1046-1057 %8 Jun %G eng %2 PMC1150419 %R 10.1104/pp.104.057406 %F ISI 2005 week 28 %0 Journal Article %J Nucleic Acids Research %D 2004 %T Demonstration of a universal surface DNA computer %A Su, X. P. %A L. M. Smith %B Nucleic Acids Research %V 32 %P 3115-3123 %8 Jun %G eng %2 PMC434441 %R 10.1093/nar/gkh635 %F ISI 2004 week 31 %0 Journal Article %J Biopolymers %D 2004 %T Invasive cleavage reactions on DNA-modified diamond surfaces %A Lu, M. C. %A Knickerbocker, T. %A Cai, W. %A Yang, W. S. %A Hamers, R. J. %A L. M. Smith %B Biopolymers %V 73 %P 606-613 %8 Apr 5 %G eng %R 10.1002/bip.20007 %F ISI 2004 week 20 %0 Journal Article %J Journal of the American Chemical Society %D 2004 %T Surface amplification of invasive cleavage products %A Chen, Y. %A Shortreed, M. R. %A Peelen, D. %A Lu, M. C. %A L. M. Smith %B Journal of the American Chemical Society %V 126 %P 3016-3017 %8 Mar 17 %G eng %R 10.1021/ja039355j %F ISI 2004 week 15 %0 Generic %D 2003 %T Creating Chemical and Biological Diamond Interfaces %A Russell, J. N. %A Butler, J. E. %A Hamers, R. J. %A L. M. Smith %A Bent, S. F. %I Naval Research Laboratory %C Washington, D.C. %G eng %0 Journal Article %J Langmuir %D 2003 %T DNA-modified diamond surfaces %A Knickerbocker, T. %A Strother, T. %A Schwartz, M. P. %A Russell, J. N. %A Butler, J. %A L. M. Smith %A Hamers, R. J. %B Langmuir %V 19 %P 1938-1942 %8 Mar 18 %G eng %R 10.1021/la026279 %F ISI 2003 week 15 %0 Journal Article %J Analytical Chemistry %D 2003 %T Mass spectrometric analysis of DNA mixtures: Instrumental effects responsible for decreased sensitivity with increasing mass %A Chen, X. Y. %A Westphall, M. S. %A L. M. Smith %B Analytical Chemistry %V 75 %P 5944-5952 %8 Nov 1 %G eng %R 10.1021/ac030127h %F ISI 2003 week 48 %0 Journal Article %J Journal of Physical Chemistry B %D 2002 %T Chemical modification and patterning of iodine-terminated silicon surfaces using visible light %A Cai, W. %A Lin, Z. %A Strother, T. %A L. M. Smith %A Hamers, R. J. %B Journal of Physical Chemistry B %V 106 %P 2656-2664 %8 Mar 14 %G eng %R 10.1021/jp013523h %0 Journal Article %J International Journal of Mass Spectrometry %D 2002 %T Collision cross sections of gas phase DNA ions %A Moradian, A. %A Scalf, M. %A Westphall, M. S. %A L. M. Smith %A Douglas, D. J. %B International Journal of Mass Spectrometry %V 219 %P 161-170 %8 Aug 1 %G eng %R 10.1016/S1387-3806(02)00546-8 %0 Journal Article %J Materials Research Society Symposium Proceedings %D 2002 %T Covalently-linked adducts of single-walled nanotubes with biomolecules: Synthesis, hybridization, and biologically-directed surface assembly %A Baker, Sarah E. %A Lasseter, Tami L. %A L. M. Smith %A Hamers, R. J. %B Materials Research Society Symposium Proceedings %V 737 %@ 0272-9172 %G English %R 10.1557/PROC-761-F4.6 %0 Journal Article %J Langmuir %D 2002 %T DNA attachment and hybridization at the silicon (100) surface %A Lin, Z. %A Strother, T. %A Cai, W. %A Cao, X. P. %A L. M. Smith %A Hamers, R. J. %B Langmuir %V 18 %P 788-796 %8 Feb 5 %@ 0743-7463 %G eng %R 10.1021/la010892w %0 Journal Article %J Nature Materials %D 2002 %T DNA-modified nanocrystalline diamond thin-films as stable, biologically active substrates %A Yang, W. S. %A Auciello, O. %A Butler, J. E. %A Cai, W. %A Carlisle, J. A. %A Gerbi, J. %A Gruen, D. M. %A Knickerbocker, T. %A Lasseter, T. L. %A Russell, J. N. %A L. M. Smith %A Hamers, R. J. %B Nature Materials %V 1 %P 253-257 %8 Dec %G eng %R 10.1038/nmat779 %F ISI 2003 week 15 %0 Journal Article %J Analytical Chemistry %D 2002 %T Multiplexed gene expression analysis using the invader RNA assay with MALDI-TOF mass spectrometry detection %A Berggren, W. T. %A Takova, T. %A Olson, M. C. %A Eis, P. S. %A Kwiatkowski, R. W. %A L. M. Smith %B Analytical Chemistry %V 74 %P 1745-1750 %8 Apr 15 %G eng %R 10.1021/ac011167t %0 Journal Article %J Langmuir %D 2002 %T Photochemical functionalization of diamond films %A Strother, T. %A Knickerbocker, T. %A Russell, J. N. %A Butler, J. E. %A L. M. Smith %A Hamers, R. J. %B Langmuir %V 18 %P 968-971 %8 Feb 19 %G eng %R 10.1021/la0112561 %0 Journal Article %J Materials Research Society Symposium Proceedings %D 2002 %T Preparation and electrochemical characterization of DNA-modified nanocrystalline diamond films %A Yang, Wensha %A Auciello, Orlando %A Butler, James E. %A Cai, Wei %A Carlisle, John A. %A Gerbi, Jennifer E. %A Gruen, Dieter M. %A Knickerbocker, Tanya %A Lasseter, Tami L. %A Russell, John N., Jr. %A L. M. Smith %A Hamers, R. J. %B Materials Research Society Symposium Proceedings %V 737 %@ 0272-9172 %G English %R 10.1557/PROC-737-F4.4 %0 Journal Article %J Analytical Chemistry %D 2002 %T Single-pulse nanoelectrospray ionization %A Berggren, W. T. %A Westphall, M. S. %A L. M. Smith %B Analytical Chemistry %V 74 %P 3443-3448 %8 Jul 15 %G eng %R 10.1021/ac010975h %0 Journal Article %J Journal of the American Chemical Society %D 2002 %T Structure-specific DNA cleavage on surfaces %A Lu, M. C. %A Hall, J. G. %A Shortreed, M. R. %A Wang, L. M. %A Berggren, W. T. %A Stevens, P. W. %A Kelso, D. M. %A Lyamichev, V. %A Neri, B. %A Skinner, J. L. %A L. M. Smith %B Journal of the American Chemical Society %V 124 %P 7924-7931 %8 Jul 10 %G eng %R 10.1021/ja012082c %0 Journal Article %J Human Mutation %D 2002 %T A surface invasive cleavage assay for highly parallel SNP analysis %A Lu, M. C. %A Shortreed, M. R. %A Hall, J. G. %A Wang, L. M. %A Berggren, T. %A Stevens, P. W. %A Kelso, D. M. %A Lyamichev, V. %A Neri, B. %A L. M. Smith %B Human Mutation %V 19 %P 416-422 %G eng %R 10.1002/humu.10071 %0 Journal Article %J Nucleic Acids Research %D 2001 %T Analysis of single nucleotide polymorphisms with solid phase invasive cleavage reactions %A Stevens, P. W. %A Hall, J. G. %A Lyamichev, V. %A Neri, B. P. %A Lu, M. C. %A Wang, L. M. %A L. M. Smith %A Kelso, D. M. %B Nucleic Acids Research %V 29 %P art. no.-e77 %8 Aug %@ 0305-1048 %G English %9 Article %R 10.1093/nar/29.16.e77 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 2001 %T A cylindrical capacitor ionization source: droplet generation and controlled charge reduction for mass spectrometry %A Ebeling, D. D. %A Westphall, M. S. %A Scalf, M. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 15 %P 401-5 %@ 0951-4198 (Print)
0951-4198 (Linking) %G English %9 Article %R 10.1002/rcm.245 %0 Journal Article %J Nature Biotechnology %D 2001 %T A DNA computing readout operation based on structure-specific cleavage %A Wang, L. M. %A Hall, J. G. %A Lu, M. C. %A Liu, Q. H. %A L. M. Smith %B Nature Biotechnology %V 19 %P 1053-1059 %8 Nov %@ 1087-0156 %G English %9 Article %R 10.1038/nbt1101-1053 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 2000 %T Analysis of single nucleotide polymorphisms by primer extension and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry %A Fei, Z. D. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 14 %P 950-959 %@ 0951-4198 %G eng %R 10.1002/(sici)1097-0231(20000615)14:11<950::aid-rcm971>3.0.co;2-3 %0 Journal Article %J Analytical Chemistry %D 2000 %T Charge reduction electrospray mass spectrometry %A Scalf, M. %A Westphall, M. S. %A L. M. Smith %B Analytical Chemistry %V 72 %P 52-60 %8 Jan %@ 0003-2700 %G eng %R 10.1021/ac990878c %0 Journal Article %J Analytical Chemistry %D 2000 %T Corona discharge in charge reduction electrospray mass spectrometry %A Ebeling, D. D. %A Westphall, M. S. %A Scalf, M. %A L. M. Smith %B Analytical Chemistry %V 72 %P 5158-5161 %8 Nov %@ 0003-2700 %G eng %R 10.1021/ac000559h %0 Journal Article %J Nucleic Acids Research %D 2000 %T Covalent attachment of oligodeoxyribonucleotides to amine-modified Si (001) surfaces %A Strother, T. %A Hamers, R. J. %A L. M. Smith %B Nucleic Acids Research %V 28 %P 3535-3541 %8 Sep %@ 0305-1048 %G eng %2 PMC110746 %R 10.1093/nar/28.18.3535 %0 Journal Article %J Nature %D 2000 %T DNA computing on surfaces %A Liu, Q. %A Wang, L. %A Frutos, A. G. %A Condon, A. E. %A Corn, R. M. %A L. M. Smith %B Nature %V 403 %P 175-9 %8 Jan 13 %@ 0028-0836 (Print)
0028-0836 (Linking) %G eng %R 10.1038/35003155 %0 Journal Article %J Analytical Chemistry %D 2000 %T Genetic identification by mass spectrometric analysis of single-nucleotide polymorphisms: Ternary encoding of genotypes %A Griffin, T. J. %A L. M. Smith %B Analytical Chemistry %V 72 %P 3298-3302 %8 Jul %@ 0003-2700 %G eng %R 10.1021/ac991390e %0 Journal Article %J Langmuir %D 2000 %T Hydrophilic/hydrophobic patterned surfaces as templates for DNA arrays %A Gillmor, S. D. %A Thiel, A. J. %A Strother, T. C. %A L. M. Smith %A Lagally, M. G. %B Langmuir %V 16 %P 7223-7228 %8 Sep %@ 0743-7463 %G eng %R 10.1021/la991026a %0 Journal Article %J Journal of the American Chemical Society %D 2000 %T Multiple word DNA computing on surfaces %A Wang, L. M. %A Liu, Q. H. %A Corn, R. M. %A Condon, A. E. %A L. M. Smith %B Journal of the American Chemical Society %V 122 %P 7435-7440 %8 Aug %@ 0002-7863 %G eng %R 10.1021/ja0010195 %0 Journal Article %J Trends in Biotechnology %D 2000 %T Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry %A Griffin, T. J. %A L. M. Smith %B Trends in Biotechnology %V 18 %P 77-84 %8 Feb %@ 0167-7799 %G eng %R 10.1016/s0167-7799(99)01401-8 %0 Journal Article %J Analytical Chemistry %D 2000 %T Site-specific mass tagging with stable isotopes in proteins for accurate and efficient protein identification %A Chen, X. %A L. M. Smith %A Bradbury, E. M. %B Analytical Chemistry %V 72 %P 1134-1143 %8 Mar %@ 0003-2700 %G eng %R 10.1021/ac9911600 %0 Journal Article %J Journal of the American Chemical Society %D 2000 %T Synthesis and characterization of DNA-modified silicon (111) surfaces %A Strother, T. %A Cai, W. %A Zhao, X. S. %A Hamers, R. J. %A L. M. Smith %B Journal of the American Chemical Society %V 122 %P 1205-1209 %8 Feb %@ 0002-7863 %G eng %R 10.1021/ja9936161 %0 Journal Article %J Science %D 1999 %T Controlling charge states of large ions %A Scalf, M. %A Westphall, M. S. %A Krause, J. %A Kaufman, S. L. %A L. M. Smith %B Science %V 283 %P 194-197 %8 Jan %@ 0036-8075 %G eng %R 10.1126/science.283.5399.194 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1999 %T Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry %A Griffin, Timothy J. %A Hall, Jeff G. %A Prudent, James R. %A L. M. Smith %B Proceedings of the National Academy of Sciences of the United States of America %V 96 %P 6301-6306 %@ 0027-8424 %G English %2 PMC26876 %R 10.1073/pnas.96.11.6301 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 1999 %T High resolution characterization of DNA fragment ions produced by ultraviolet matrix-assisted laser desorption/ionization using linear and reflecting time-of-flight mass spectrometry %A Krause, Joern %A Scalf, Mark %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 10 %P 423-429 %@ 1044-0305 %G English %R 10.1016/s1044-0305(99)00009-4 %0 Book Section %D 1999 %T MALDI-TOF mass spectrometric detection of PNA hybrids for genetic analysis %A Griffin, Timothy J. %A Tang, Wei %A L. M. Smith %E Nielsen, P. E. %E Egholm, M. %7 1 %I Horizon Scientific Press %P 143-154 %@ 1-898486-16-6 %G English %& 3.5 %0 Journal Article %J Biosystems %D 1999 %T Progress toward demonstration of a surface based DNA computation: a one word approach to solve a model satisfiability problem %A Liu, Q. %A Frutos, A. G. %A Wang, L. %A Thiel, A. J. %A Gillmor, S. D. %A Strother, C. T. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %B Biosystems %V 52 %P 25-33 %@ 0303-2647 %G English %R 10.1016/s0303-2647(99)00029-5 %0 Journal Article %J Analytical Chemistry %D 1999 %T Stable-isotope-assisted MALDI-TOF mass spectrometry for accurate determination of nucleotide compositions of PCR products %A Chen, X. %A Fei, Z. D. %A L. M. Smith %A Bradbury, E. M. %A Majidi, V. %B Analytical Chemistry %V 71 %P 3118-3125 %8 Aug %@ 0003-2700 %G eng %R 10.1021/ac9812680 %0 Conference Paper %D 1999 %T A surface-based approach to DNA computation %A Liu, Q. %A Guo, Z. %A Fei, Z. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %E Landweber, L. F. %E Baum, E. B. %I American Math. Soc %C Princeton, NJ %P 123-132 %8 1999 %G eng %0 Journal Article %J Biosystems %D 1999 %T Surface-based DNA computing operations: DESTROY and READOUT %A Wang, L. %A Liu, Q. %A Frutos, A. G. %A Gillmor, S. D. %A Thiel, A. J. %A Strother, T. C. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %B Biosystems %V 52 %P 189-191 %@ 0303-2647 %G English %R 10.1016/s0303-2647(99)00046-5 %0 Journal Article %J Analytical Biochemistry %D 1998 %T An approach to predicting the stabilities of peptide nucleic acid : DNA duplexes %A Griffin, T. J. %A L. M. Smith %B Analytical Biochemistry %V 260 %P 56-63 %8 Jun %@ 0003-2697 %G eng %R 10.1006/abio.1998.2686 %0 Journal Article %J Journal of Computational Biology %D 1998 %T DNA computing on surfaces: Encoding information at the single base level %A Liu, Q. H. %A Frutos, A. G. %A Thiel, A. J. %A Corn, R. M. %A L. M. Smith %B Journal of Computational Biology %V 5 %P 269-278 %8 Sum %@ 1066-5277 %G eng %R 10.1089/cmb.1998.5.269 %0 Journal Article %J Journal of the American Chemical Society %D 1998 %T Enzymatic ligation reactions of DNA "words" on surfaces for DNA computing %A Frutos, A. G. %A L. M. Smith %A Corn, R. M. %B Journal of the American Chemical Society %V 120 %P 10277-10282 %8 Oct %@ 0002-7863 %G eng %R 10.1021/ja982030w %0 Journal Article %J Nucleic Acids Research %D 1998 %T MALDI-TOF mass spectrometric typing of single nucleotide polymorphisms with mass-tagged ddNTPs %A Fei, Z. D. %A Ono, T. %A L. M. Smith %B Nucleic Acids Research %V 26 %P 2827-2828 %8 Jun %@ 0305-1048 %G eng %2 PMC147612 %R 10.1093/nar/26.11.2827 %0 Journal Article %J Genome Research %D 1998 %T A software system for data analysis in automated DNA sequencing %A Giddings, M. C. %A Severin, J. %A Westphall, M. %A Wu, J. Z. %A L. M. Smith %B Genome Research %V 8 %P 644-665 %8 Jun %@ 1054-9803 %G eng %2 PMC310740 %R 10.1101/gr.8.6.644 %0 Journal Article %J Journal of Computational Biology %D 1998 %T A surface-based approach to DNA computation %A L. M. Smith %A Corn, R. M. %A Condon, A. E. %A Lagally, M. G. %A Frutos, A. G. %A Liu, Q. H. %A Thiel, A. J. %B Journal of Computational Biology %V 5 %P 255-267 %8 Sum %@ 1066-5277 %G eng %R 10.1089/cmb.1998.5.255 %0 Journal Article %J Physical Review B %D 1998 %T Time-dependent heterointerfacial band bending and quasi-two-dimensionl excitonic transport in GaAs structures %A Gilliland, G. D. %A Petrovic, M. S. %A Hjalmarson, H. P. %A Wolford, D. J. %A Northrop, G. A. %A Kuech, T. F. %A Smith, L. M. %A Bradley, J. A. %B Physical Review B %V 58 %P 4728-4732 %8 Aug %G eng %R 10.1103/PhysRevB.58.4728 %0 Journal Article %J Nucleic Acids Research %D 1997 %T 2'-fluoro modified nucleic acids: polymerase-directed synthesis, properties and stability to analysis by matrix-assisted laser desorption/ionization mass spectrometry %A Ono, T. %A Scalf, M. %A L. M. Smith %B Nucleic Acids Research %V 25 %P 4581-4588 %8 Nov %@ 0305-1048 %G eng %2 PMC147098 %R 10.1093/nar/25.22.4581 %0 Journal Article %J Analytical Chemistry %D 1997 %T Controlling DNA Fragmentation in MALDI-MS by Chemical Modification %A Tang, Wei %A Zhu, Lin %A L. M. Smith %B Analytical Chemistry %V 69 %P 302-312 %@ 0003-2700 %G English %R 10.1021/ac960865o %0 Journal Article %J Nucleic Acids Research %D 1997 %T Demonstration of a word design strategy for DNA computing on surfaces %A Frutos, A. G. %A Liu, Q. H. %A Thiel, A. J. %A Sanner, A. M. W. %A Condon, A. E. %A L. M. Smith %A Corn, R. M. %B Nucleic Acids Research %V 25 %P 4748-4757 %8 Dec %@ 0305-1048 %G eng %2 PMC147124 %R 10.1093/nar/25.23.4748 %0 Journal Article %J Analytical Chemistry %D 1997 %T DNA analysis using an electrospray scanning mobility particle sizer %A Mouradian, S. %A Skogen, J. W. %A Dorman, F. D. %A Zarrin, F. %A Kaufman, S. L. %A L. M. Smith %B Analytical Chemistry %V 69 %P 919-925 %8 Mar %@ 0003-2700 %G eng %R 10.1021/ac960785k %0 Journal Article %J Nature Biotechnology %D 1997 %T Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization %A Guo, Z. %A Liu, Q. H. %A L. M. Smith %B Nature Biotechnology %V 15 %P 331-335 %8 Apr %@ 1087-0156 %G eng %R 10.1038/nbt0497-331 %0 Journal Article %J International Journal of Mass Spectrometry and Ion Processes %D 1997 %T Factors influencing oligonucleotide stability in matrix-assisted laser desorption/ionization (MALDI) mass spectroscopy %A Tang, Wei %A Krause, Joern %A Zhu, Lin %A L. M. Smith %B International Journal of Mass Spectrometry and Ion Processes %V 169/170 %P 301-311 %@ 0168-1176 %G English %R 10.1016/s0168-1176(97)00204-8 %0 Journal Article %J Nature Biotechnology %D 1997 %T Genetic analysis by peptide nucleic acid affinity MALDI-TOF mass spectrometry %A Griffin, T. J. %A Tang, W. %A L. M. Smith %B Nature Biotechnology %V 15 %P 1368-1372 %8 Dec %@ 1087-0156 %G eng %R 10.1038/nbt1297-1368 %0 Journal Article %J Analytical Chemistry %D 1997 %T In situ surface plasmon resonance imaging detection of DNA hybridization to oligonucleotide arrays on gold surfaces %A Thiel, A. J. %A Frutos, A. G. %A Jordan, C. E. %A Corn, R. M. %A L. M. Smith %B Analytical Chemistry %V 69 %P 4948-4956 %8 Dec %@ 0003-2700 %G eng %R 10.1021/ac9708001 %0 Journal Article %J Nucleic Acids Research %D 1997 %T Ligation-mediated PCR amplification of specific fragments from a Class-II restriction endonuclease %A Guilfoyle, Richard A. %A Leeck, Charles L. %A Kroening, K. Dubear %A L. M. Smith %A Guo, Zhen %B Nucleic Acids Research %V 25 %P 1854-1858 %@ 0305-1048 %G English %2 PMC146646 %R 10.1093/nar/25.9.1854 %0 Journal Article %J Journal of the American Society for Mass Spectrometry %D 1997 %T Positive ion formation in the ultraviolet matrix- assisted laser desorption/ionization analysis of oligonucleotides by using 2,5-dihydroxybenzoic acid %A Tang, Wei %A Nelson, Christine M. %A Zhu, Lin %A L. M. Smith %B Journal of the American Society for Mass Spectrometry %V 8 %P 218-224 %@ 1044-0305 %G English %R 10.1016/s1044-0305(96)00237-1 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 1996 %T Analyzing sequencing reactions from bacteriophage M13 by matrix-assisted laser desorption/ionization mass spectrometry %A Mouradian, S. %A Rank, D. R. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 10 %P 1475-1478 %@ 0951-4198 %G eng %R 10.1002/(sici)1097-0231(199609)10:12<1475::aid-rcm696>3.3.co;2-3 %0 Journal Article %J Optics and Photonics News %D 1996 %T Automated DNA sequencers: the next generation %A Rank, David %A L. M. Smith %B Optics and Photonics News %I OSA %V 7 %P 29-33 %8 1996/03/01 %G eng %R 10.1364/OPN.7.3.000029 %0 Journal Article %J Electrophoresis %D 1996 %T Automatic matrix determination in four dye fluorescence-based DNA sequencing %A Yin, Z. B. %A Severin, J. %A Giddings, M. C. %A Huang, W. A. %A Westphall, M. S. %A L. M. Smith %B Electrophoresis %V 17 %P 1143-1150 %8 Jun %@ 0173-0835 %G eng %R 10.1002/elps.1150170626 %0 Journal Article %J Laboratory Robotics and Automation %D 1996 %T Automation in large-scale DNA sequencing %A Buxton, E. C. %A Westphall, M. %A Jacobson, W. %A Tong, X. C. %A L. M. Smith %B Laboratory Robotics and Automation %V 8 %P 339-349 %@ 0895-7533 %G eng %R 10.1002/(sici)1098-2728(1996)8:6<339::aid-lra3>3.0.co;2-1 %0 Journal Article %J Biochemica %D 1996 %T The Cleavase Fragment Length Polymorphism (CFLP) assay %A Brow, M. A. D. %A Oldenburg, M. C. %A Lyamichev, V. %A Heisler, L. M. %A Grotelueschen, J. %A Lyamicheva, N. %A Kozyavkin, S. %A Fors, L. %A Dahlberg, J. E. %A L. M. Smith %A Olive, D. M. %B Biochemica %V 1 %P 14-15 %G eng %0 Journal Article %J Journal of Clinical Microbiology %D 1996 %T Differentiation of bacterial 16S rRNA genes and intergenic regions and Mycobacterium tuberculosis katG genes by structure-specific endonuclease cleavage %A Brow, M. A. D. %A Oldenburg, M. C. %A Lyamichev, V. %A Heisler, L. M. %A Lyamicheva, N. %A Hall, J. G. %A Eagan, N. J. %A Olive, D. M. %A L. M. Smith %A Fors, L. %A Dahlberg, J. E. %B Journal of Clinical Microbiology %V 34 %P 3129-3137 %8 Dec %@ 0095-1137 %G eng %2 PMC229470 %0 Journal Article %J Proceedings of SPIE - The International Society for Optical Engineering %D 1996 %T Fragmentation mechanisms of oligonucleotides in MALDI mass spectrometry %A Nelson, Christine M. %A Zhu, Lin %A Tang, Wei %A L. M. Smith %A Crellin, Kevin %A Berry, Jamal %A Beauchamp, Jesse L. %B Proceedings of SPIE - The International Society for Optical Engineering %V 2680 %P 247-255 %@ 0277-786X %G English %R 10.1117/12.237612 %0 Journal Article %J Methods in Enzymology %D 1996 %T High-speed automated DNA sequencing in ultrathin slab gels %A L. M. Smith %A Brumley, Robert L., Jr. %A Buxton, Eric C. %A Giddings, Michael %A Marchbanks, Michael %A Tong, Xinchun %B Methods in Enzymology %V 271 %P 219-237 %@ 0076-6879 %G English %R 10.1016/S0076-6879(96)71012-1 %0 Journal Article %J Gene %D 1996 %T M13-102: A vector for facilitating construction and improving quality of M13 shotgun libraries %A Chen, D. H. %A Johnson, A. F. %A Severin, J. M. %A Rank, D. R. %A L. M. Smith %A Guilfoyle, R. A. %B Gene %V 172 %P 53-57 %8 Jun %@ 0378-1119 %G eng %R 10.1016/0378-1119(96)00048-0 %0 Journal Article %J Focus %D 1996 %T Mutation detection by cleavase fragment length polymorphism %A Brow, M. A. D. %A Oldenburg, M. C. %A Lyamichev, V. %A Heisler, L. M. %A Grotelueschen, J. %A Lyamicheva, N. %A Kozyavkin, S. %A Fors, L., %A Dahlberg, J. %A L. M. Smith %A Olive, D. M. %B Focus %V 18 %P 2-5 %G eng %0 Journal Article %J Analytical Biochemistry %D 1996 %T Purification of single-stranded M13 DNA by cooperative triple-helix-mediated affinity capture %A Johnson, A. F. %A Wang, R. F. %A Ji, H. M. %A Chen, D. H. %A Guilfoyle, R. A. %A L. M. Smith %B Analytical Biochemistry %V 234 %P 83-95 %8 Feb %@ 0003-2697 %G eng %R 10.1006/abio.1996.0053 %0 Journal Article %J Genomics %D 1996 %T Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture %A Ji, H. M. %A Francisco, T. %A L. M. Smith %A Guilfoyle, R. A. %B Genomics %V 31 %P 185-192 %8 Jan %@ 0888-7543 %G eng %R 10.1006/geno.1996.0030 %0 Journal Article %J Journal of the American Chemical Society %D 1996 %T A self-assembled matrix monolayer for UV-MALDI mass spectrometry %A Mouradian, S. %A Nelson, C. M. %A L. M. Smith %B Journal of the American Chemical Society %V 118 %P 8639-8645 %8 Sep %@ 0002-7863 %G eng %R 10.1021/ja953585j %0 Journal Article %J Nature Biotechnology %D 1996 %T Sequence from spectrometry: a realistic prospect? %A L. M. Smith %B Nature Biotechnology %V 14 %P 1084, 1087 %@ 1087-0156 %G English %R 10.1038/nbt0996-1084 %0 Journal Article %J Proceedings of SPIE - The International Society for Optical Engineering %D 1995 %T High-speed automated DNA sequencing utilizing from-the-side laser excitation %A Westphall, Michael S. %A Brumley, Robert L., Jr. %A Buxton, Eric C. %A L. M. Smith %B Proceedings of SPIE - The International Society for Optical Engineering %V 2386 %P 45-54 %@ 0277-786X %G English %R 10.1117/12.206007 %0 Journal Article %J Annual Review of Biophysics & Biomolecular Structure %D 1995 %T Mass spectrometry of nucleic acids: the promise of matrix-assisted laser desorption-ionization (MALDI) mass spectrometry %A Fitzgerald, Michael C. %A L. M. Smith %B Annual Review of Biophysics & Biomolecular Structure %V 24 %P 117-40 %@ 1056-8700 %G English %R 10.1146/annurev.bb.24.060195.001001 %0 Journal Article %J Journal of the American Chemical Society %D 1995 %T Oligodeoxynucleotide Fragmentation in MALDI/TOF Mass Spectrometry Using 355-nm Radiation %A Zhu, L. %A Parr, G. R. %A Fitzgerald, M. C. %A Nelson, C. M. %A L. M. Smith %B Journal of the American Chemical Society %V 117 %P 6048-6056 %8 Jun %@ 0002-7863 %G eng %R 10.1021/ja00127a018 %0 Journal Article %J Analytical Chemistry %D 1995 %T Side Excitation of Fluorescence in Ultrathin Slab Gel Electrophoresis %A Chen, D. H. %A Peterson, M. D. %A Brumley, R. L. %A Giddings, M. C. %A Buxton, E. C. %A Westphall, M. %A L. M. Smith %B Analytical Chemistry %V 67 %P 3405-3411 %8 Oct %@ 0003-2700 %G eng %R 10.1021/ac00115a007 %0 Journal Article %J Nucleic Acids Research %D 1994 %T Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports %A Guo, Zhen %A Guilfoyle, Richard A. %A Thiel, Andrew J. %A Wang, Renfeng %A L. M. Smith %B Nucleic Acids Research %V 22 %P 5456-65 %@ 0305-1048 %G English %2 PMC332096 %R 10.1093/nar/22.24.5456 %0 Journal Article %J Nucleic Acids Research %D 1994 %T A direct selection strategy for shotgun cloning and sequencing in the bacteriophage M13 %A Guilfoyle, Richard A. %A L. M. Smith %B Nucleic Acids Research %V 22 %P 100-7 %@ 0305-1048 %G English %2 PMC307752 %R 10.1093/nar/22.1.100 %0 Journal Article %J Analytical Biochemistry %D 1994 %T DNA sequencing with a hexamer string primer and dye-labeled terminators %A Hou, W. Y. %A L. M. Smith %B Analytical Biochemistry %V 221 %P 136-141 %8 Aug %@ 0003-2697 %G eng %R 10.1006/abio.1994.1389 %0 Journal Article %J Proceedings - Electrochemical Society %D 1994 %T Fabrication of microstructures for use in biological and optical applications %A Denton, D. D. %A Thiel, A. J. %A L. M. Smith %A Bajikar, S. %A White, V. %A Ghodssi, R. %A Fish, G. %A McCaughan, L. %B Proceedings - Electrochemical Society %V 94-14 %P 103-14 %@ 0161-6374 %G English %0 Journal Article %J DNA Sequence %D 1994 %T A high throughput system for the preparation of single stranded templates grown in microculture %A Kolner, Douglas E. %A Guilfoyle, Richard A. %A L. M. Smith %B DNA Sequence %V 4 %P 253-7 %@ 1042-5179 %G English %0 Journal Article %J Genetic Analysis, Techniques and Applications %D 1994 %T Rapid isolation of cosmid insert DNA by triple-helix-mediated affinity capture %A Ji, Huamin %A L. M. Smith %A Guilfoyle, Richard A. %B Genetic Analysis, Techniques and Applications %V 11 %P 43-7 %@ 1050-3862 %G English %R 10.1016/1050-3862(94)90060-4 %0 Journal Article %J Electrophoresis %D 1994 %T Separating field strength, temperature, and pulsing effects in pulsed field electrophoresis %A Mouradian, S. %A Brumley, R. L. %A L. M. Smith %B Electrophoresis %V 15 %P 1084-1090 %8 Aug-Sep %@ 0173-0835 %G eng %R 10.1002/elps.11501501162 %0 Journal Article %J JAMA %D 1994 %T Statement on use of DNA testing for presymptomatic identification of cancer risk %A Collins, F. S. %A Benjamin, L. J. %A Botstein, D. %A Cox, J. R. %A Davidson, N. %A Gray, J. W. %A Holtzman, N. %A Housman, D. E. %A Jamison, K. R. %A Nelkin, D. %A Rothstein, R. %A Smith, D. C. %A L. M. Smith %A Spence, M. A. %A Tilghman, S. M. %B JAMA %V 271 %P 785-785 %8 Mar %@ 0098-7484 %G eng %R 10.1001/jama.1994.03510340075038 %0 Journal Article %J Nucleic Acids Research %D 1993 %T An adaptive, object oriented strategy for base calling in DNA sequence analysis %A Giddings, Michael C. %A Brumley, Robert L., Jr. %A Haker, Michael %A L. M. Smith %B Nucleic Acids Research %V 21 %P 4530-40 %@ 0305-1048 %G English %2 PMC311186 %R 10.1093/nar/21.19.4530 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 1993 %T The analysis of mock DNA sequencing reactions using matrix-assisted laser desorption/ionization mass spectrometry %A Fitzgerald, M. C. %A Zhu, L. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 7 %P 895-897 %8 Oct %@ 0951-4198 %G eng %R 10.1002/rcm.1290071008 %0 Journal Article %J Journal of Physical Chemistry %D 1993 %T Analysis of resolution in DNA sequencing by capillary gel electrophoresis %A Luckey, J. A. %A Norris, T. B. %A L. M. Smith %B Journal of Physical Chemistry %V 97 %P 3067-3075 %8 Mar %@ 0022-3654 %G eng %R 10.1021/j100114a038 %0 Journal Article %J Cancer Detection and Prevention %D 1993 %T Automated DNA-Sequencing - a Look into the Future %A L. M. Smith %B Cancer Detection and Prevention %V 17 %P 283-288 %@ 0361-090x %G English %0 Journal Article %J Analytical Chemistry %D 1993 %T Basic matrices for the matrix-assisted laser desorption/ionization mass spectrometry of proteins and oligonucleotides %A Fitzgerald, M. C. %A Parr, G. R. %A L. M. Smith %B Analytical Chemistry %V 65 %P 3204-3211 %8 Nov %@ 0003-2700 %G eng %R 10.1021/ac00070a007 %0 Journal Article %J Current Opinion in Biotechnology %D 1993 %T DNA electrophoresis %A L. M. Smith %B Current Opinion in Biotechnology %V 4 %P 37-40 %@ 0958-1669 %G English %R 10.1016/0958-1669(93)90029-v %0 Journal Article %J Nucleic Acids Research %D 1993 %T Fluorescence-based DNA sequencing with hexamer primers %A Hou, Weiying %A L. M. Smith %B Nucleic Acids Research %V 21 %P 3331-2 %@ 0305-1048 %G English %2 PMC309784 %R 10.1093/nar/21.14.3331 %0 Journal Article %J Science %D 1993 %T The Future of DNA-Sequencing %A L. M. Smith %B Science %V 262 %P 530-532 %8 Oct 22 %@ 0036-8075 %G English %R 10.1126/science.8211178 %0 Journal Article %J Methods in Enzymology %D 1993 %T High-speed DNA sequencing by capillary gel electrophoresis %A Luckey, John A. %A Drossman, Howard %A Kostichka, Tony %A L. M. Smith %B Methods in Enzymology %V 218 %P 154-72 %@ 0076-6879 %G English %R 10.1016/0076-6879(93)18014-4 %0 Journal Article %J Electrophoresis %D 1993 %T A model for the mobility of single-stranded DNA in capillary gel electrophoresis %A Luckey, John A. %A L. M. Smith %B Electrophoresis %V 14 %P 492-501 %@ 0173-0835 %G English %R 10.1002/elps.1150140176 %0 Journal Article %J Analytical Chemistry %D 1993 %T Nonisotopic DNA detection system employing elastase and a fluorogenic rhodamine substrate %A Johnson, Arthur F. %A Struthers, Mary D. %A Pierson, Keith B. %A Mangel, Walter F. %A L. M. Smith %B Analytical Chemistry %V 65 %P 2352-9 %@ 0003-2700 %G English %R 10.1021/ac00065a031 %0 Journal Article %J Analytical Chemistry %D 1993 %T Optimization of electric field strength for DNA sequencing in capillary gel electrophoresis %A Luckey, J. A. %A L. M. Smith %B Analytical Chemistry %V 65 %P 2841-2850 %8 Oct %@ 0003-2700 %G eng %R 10.1021/ac00068a022 %0 Journal Article %J Proceedings of SPIE - The International Society for Optical Engineering %D 1993 %T Optimization of electric field strength for DNA sequencing in capillary gel electrophoresis %A Luckey, John A. %A L. M. Smith %B Proceedings of SPIE - The International Society for Optical Engineering %V 1891 %P 21-6 %@ 0277-786X %G English %R 10.1117/12.146715 %0 Journal Article %J Analytical Chemistry %D 1993 %T Rapid purification of double-stranded DNA by triple-helix-mediated affinity capture %A Ji, Huamin %A L. M. Smith %B Analytical Chemistry %V 65 %P 1323-8 %@ 0003-2700 %G English %R 10.1021/ac00058a005 %0 Journal Article %J DNA Sequence %D 1993 %T Solid phase purification in automated DNA sequencing %A Tong, Xinchun %A L. M. Smith %B DNA Sequence %V 4 %P 151-62 %@ 1042-5179 %G English %R 10.3109/10425179309015628 %0 Journal Article %J Bio/Technology %D 1992 %T High speed automated DNA sequencing in ultrathin slab gels %A Kostichka, Anthony J. %A Marchbanks, Michael L. %A Brumley, Robert L., Jr. %A Drossman, Howard %A L. M. Smith %B Bio/Technology %V 10 %P 78-81 %@ 0733-222X %G English %R 10.1038/nbt0192-78 %0 Journal Article %J Rapid Communications in Mass Spectrometry %D 1992 %T Matrix-assisted laser desorption/ionization mass spectrometry of synthetic oligodeoxyribonucleotides %A Parr, G. R. %A Fitzgerald, M. C. %A L. M. Smith %B Rapid Communications in Mass Spectrometry %V 6 %P 369-372 %8 Jun %@ 0951-4198 %G eng %R 10.1002/rcm.1290060603 %0 Journal Article %J Nucleic Acids Research %D 1992 %T Rapid shotgun cloning utilizing the two base recognition endonuclease CviJI %A Fitzgerald, M. C. %A Skowron, P. %A Vanetten, J. L. %A L. M. Smith %A Mead, D. A. %B Nucleic Acids Research %V 20 %P 3753-3762 %8 Jul %@ 0305-1048 %G eng %2 PMC334028 %R 10.1093/nar/20.14.3753 %0 Journal Article %J Analytical Chemistry %D 1992 %T Solid-phase method for the purification of DNA sequencing reactions %A Tong, X. C. %A L. M. Smith %B Analytical Chemistry %V 64 %P 2672-2677 %8 Nov %@ 0003-2700 %G eng %R 10.1021/ac00046a004 %0 Journal Article %J BioTechniques %D 1992 %T Ultrathin DNA sequencing gels using microtrough vertical electrophoresis plates %A Kolner, Douglas E. %A Mead, David A. %A L. M. Smith %B BioTechniques %V 13 %P 338-9 %@ 0736-6205 %G English %0 Journal Article %J Laboratory Robotics and Automation %D 1991 %T Automated methods in DNA sequence analysis %A Luckey, John A. %A L. M. Smith %B Laboratory Robotics and Automation %V 3 %P 175-80 %@ 0895-7533 %G English %0 Journal Article %J BioTechniques %D 1991 %T Bst DNA polymerase permits rapid sequence analysis from nanogram amounts of template %A Mead, David A. %A McClary, J. A. %A Luckey, J. A. %A Kostichka, A. J. %A Witney, F. R. %A L. M. Smith %B BioTechniques %V 11 %P 76-8, 80, 82-4, 86-7 %@ 0736-6205 %G English %0 Journal Article %J Nature %D 1991 %T High-speed DNA sequencing by capillary gel electrophoresis %A L. M. Smith %B Nature %V 349 %P 812-813 %8 Feb %@ 0028-0836 %G eng %R 10.1038/349812a0 %0 Journal Article %J Journal of Vacuum Science & Technology B %D 1991 %T INTRINSIC RECOMBINATION AND INTERFACE CHARACTERIZATION IN SURFACE-FREE GAAS STRUCTURES %A Wolford, D. J. %A Gilliland, G. D. %A Kuech, T. F. %A Smith, L. M. %A Martinsen, J. %A Bradley, J. A. %A Tsang, C. F. %A Venkatasubramanian, R. %A Ghandi, S. K. %A Hjalmarson, H. P. %B Journal of Vacuum Science & Technology B %V 9 %P 2369-2376 %8 Jul-Aug %@ 1071-1023 %G eng %M WOS:A1991GB89700080 %R 10.1116/1.585705 %0 Journal Article %J Nucleic Acids Research %D 1991 %T Rapid DNA sequencing by horizontal ultrathin gel electrophoresis %A Brumley, R. L. %A L. M. Smith %B Nucleic Acids Research %V 19 %P 4121-4126 %8 Aug %@ 0305-1048 %G eng %2 PMC328550 %R 10.1093/nar/19.15.4121 %0 Journal Article %J Bio/Technology %D 1991 %T A universal method for the direct cloning of PCR amplified nucleic acid %A Mead, D. A. %A Pey, N. K. %A Herrnstadt, C. %A Marcil, R. A. %A L. M. Smith %B Bio/Technology %V 9 %P 657-663 %8 Jul %@ 0733-222X %G eng %R 10.1038/nbt0791-657 %0 Journal Article %J BioTechniques %D 1990 %T An automated instrument for the performance of enzymatic DNA sequencing reactions %A D'Cunha, J. %A Berson, B. J. %A Brumley, R. L., Jr. %A Wagner, P. R. %A L. M. Smith %B BioTechniques %V 9 %P 80-5, 88-90 %@ 0736-6205 %G English %0 Journal Article %J Nucleic Acids Research %D 1990 %T High speed DNA sequencing by capillary electrophoresis %A Luckey, J. A. %A Drossman, H. %A Kostichka, A. J. %A Mead, D. A. %A Dcunha, J. %A Norris, T. B. %A L. M. Smith %B Nucleic Acids Research %V 18 %P 4417-4421 %8 Aug %@ 0305-1048 %G eng %2 PMC331259 %R 10.1093/nar/18.15.4417 %0 Journal Article %J Analytical Chemistry %D 1990 %T High-speed separations of DNA sequencing reactions by capillary electrophoresis %A Drossman, H. %A Luckey, J. A. %A Kostichka, A. J. %A Dcunha, J. %A L. M. Smith %B Analytical Chemistry %V 62 %P 900-903 %8 May %@ 0003-2700 %G eng %R 10.1021/ac00208a003 %0 Journal Article %J Struct. Methods, Proc. Conversation Discip. Biomol. Stereodyn., 6th %D 1990 %T Peak height variability and accuracy in automated DNA sequencing %A Sanders, Jane Z. %A MacKellar, Sara L. %A Otto, Barbara J. %A Dodd, Christopher T. %A Heiner, Cheryl %A Hood, Leroy E. %A L. M. Smith %B Struct. Methods, Proc. Conversation Discip. Biomol. Stereodyn., 6th %V 1 %P 89-102 %G English %0 Journal Article %J Genome %D 1989 %T Automated DNA sequencing and the analysis of the human genome %A L. M. Smith %B Genome %V 31 %P 929-37 %@ 0831-2796 %G English %R 10.1139/g89-164 %0 Journal Article %J American Biotechnology Laboratory %D 1989 %T DNA sequence analysis: past, present, and future %A L. M. Smith %B American Biotechnology Laboratory %V 7 %P 10, 12, 14, 16-18, 20-5 %@ 0749-3223 %G English %0 Journal Article %J Analytical Chemistry %D 1988 %T Automated synthesis and sequence analysis of biological macromolecules %A L. M. Smith %B Analytical Chemistry %V 60 %P 381A-382A, 384A-390A %@ 0003-2700 %G English %R 10.1021/ac00157a717 %0 Journal Article %J Genet. Eng. (N. Y.) %D 1988 %T Fluorescence-based automated DNA sequence analysis %A L. M. Smith %B Genet. Eng. (N. Y.) %V 10 %P 91-108 %@ 0196-3716 %G English %R 10.1007/978-1-4615-7081-3_5 %0 Journal Article %J BioTechniques %D 1987 %T Approaches to subpicomole protein sequencing %A Kent, S. %A Hood, L. %A Aebersold, R. %A Teplow, D. %A L. M. Smith %A Farnsworth, V. %A Cartier, P. %A Hines, W. %A Hughes, P. %A Dodd, C. %B BioTechniques %V 5 %P 314-321 %8 May-Jun %@ 0736-6205 %G eng %0 Journal Article %J Genomics %D 1987 %T Automated DNA sequencing and analysis of the human genome %A Hood, L. E. %A Hunkapiller, M. W. %A L. M. Smith %B Genomics %V 1 %P 201-12 %@ 0888-7543 %G English %R 10.1016/0888-7543(87)90046-2 %0 Journal Article %J BioTechniques %D 1987 %T Automated DNA-Sequence Analysis %A Connell, C. %A Fung, S. %A Heiner, C. %A Bridgham, J. %A Chakerian, V. %A Heron, E. %A Jones, B. %A Menchen, S. %A Mordan, W. %A Raff, M. %A Recknor, M. %A L. M. Smith %A Springer, J. %A Woo, S. %A Hunkapiller, M. %B BioTechniques %V 5 %P 342-& %8 May-Jun %@ 0736-6205 %G eng %0 Journal Article %J Bio/Technology %D 1987 %T Mapping and sequencing the human genome: how to proceed %A L. M. Smith %A Hood, Leroy %B Bio/Technology %V 5 %P 933-9 %@ 0733-222X %G English %R 10.1038/nbt0987-933 %0 Journal Article %J Methods in Enzymology %D 1987 %T The synthesis and use of fluorescent oligonucleotides in DNA sequence analysis %A L. M. Smith %A Kaiser, Robert J. %A Sanders, Jane Z. %A Hood, Leroy E. %B Methods in Enzymology %V 155 %P 260-301 %@ 0076-6879 %G English %R 10.1016/0076-6879(87)55021-2 %0 Journal Article %J Nature %D 1986 %T Fluorescence detection in automated DNA sequence analysis %A L. M. Smith %A Sanders, Jane Z. %A Kaiser, Robert J. %A Hughes, Peter %A Dodd, Chris %A Connell, Charles R. %A Heiner, Cheryl %A Kent, Stephen B. H. %A Hood, Leroy E. %B Nature %V 321 %P 674-9 %@ 0028-0836 %G English %R 10.1038/321674a0 %0 Journal Article %J Nucleic Acids Research %D 1985 %T The synthesis of oligonucleotides containing an aliphatic amino group at the 5' terminus: synthesis of fluorescent DNA primers for use in DNA sequence analysis %A L. M. Smith %A Fung, Steven %A Hunkapiller, Michael W. %A Hunkapiller, Tim J. %A Hood, Leroy E. %B Nucleic Acids Research %V 13 %P 2399-412 %@ 0305-1048 %G English %R 10.1093/nar/13.7.2399 %0 Journal Article %J Cancer Research %D 1984 %T Effect of hyperthermia on murine cell surface histocompatibility antigens %A Mehdi, S. Q. %A Recktenwald, D. J. %A L. M. Smith %A Li, G. C. %A Armour, E. P. %A Hahn, G. M. %B Cancer Research %V 44 %P 3394-3397 %@ 0008-5472 %G eng %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences %D 1982 %T Cell surface properties of HLA antigens on Epstein-Barr virus-transformed cell lines %A L. M. Smith %A Petty, H. R. %A Parham, P. %A McConnell, H. M. %B Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences %V 79 %P 608-612 %@ 0027-8424 %G eng %R 10.1073/pnas.79.2.608 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1982 %T H-2Kk and vesicular stomatitis virus G proteins are not extensively associated in reconstituted membranes recognized by T cells %A Cartwright, Gene S. %A L. M. Smith %A Heinzelmann, Eric W. %A Ruebush, Mary J. %A Parce, J. Wallace %A McConnell, Harden M. %B Proceedings of the National Academy of Sciences of the United States of America %V 79 %P 1506-10 %@ 0027-8424 %G English %R 10.1073/pnas.79.5.1506 %0 Journal Article %J Molecular Immunology %D 1982 %T The lateral mobility and surface distribution of Lyt-1, Lyt-2 and Lyt-3 on mouse thymocytes %A Howard, F. D. %A Ledbetter, J. A. %A Carter, D. P. %A L. M. Smith %A McConnell, H. M. %B Molecular Immunology %V 19 %P 1481-1489 %@ 0161-5890 %G eng %R 10.1016/0161-5890(82)90194-8 %0 Journal Article %J Journal of Cell Biology %D 1982 %T Lipid monolayer-coated solid surfaces do not perturb the lateral motion and distribution of C3b receptors on neutrophils %A Hafeman, D. G. %A L. M. Smith %A Fearon, D. T. %A McConnell, H. M. %B Journal of Cell Biology %V 94 %P 224-227 %@ 0021-9525 %G eng %R 10.1083/jcb.94.1.224 %0 Thesis %D 1981 %T The Lateral and Rotational Motion of Membrane Components %A L. M. Smith %I Stanford University %C Ann Arbor %V 8115832 %P 168 p. %8 1981 %G English %9 Ph.D. %0 Journal Article %J Biophysical Journal %D 1981 %T Measurement of rotational motion in membranes using fluorescence recovery after photobleaching %A L. M. Smith %A Weis, Robert M. %A McConnell, Harden M. %B Biophysical Journal %V 36 %P 73-91 %@ 0006-3495 %G English %R 10.1016/s0006-3495(81)84717-0 %0 Journal Article %J Biophysical Journal %D 1981 %T Pattern photobleaching of fluorescent lipid vesicles using polarized laser light %A L. M. Smith %A McConnell, H. M. %A Smith, B. A. %A Parce, J. W. %B Biophysical Journal %V 33 %P 139-146 %@ 0006-3495 %G eng %R 10.1016/S0006-3495(81)84877-1 %0 Journal Article %J Biochemistry %D 1980 %T Lateral diffusion of M-13 coat protein in mixtures of phosphatidylcholine and cholesterol %A L. M. Smith %A Rubenstein, John L. R. %A Parce, J. Wallace %A McConnell, Harden M. %B Biochemistry %V 19 %P 5907-11 %@ 0006-2960 %G English %R 10.1021/bi00566a037 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1980 %T Lateral distribution and diffusion of the C3b receptor of complement, HLA antigens, and lipid probes in peripheral blood leukocytes %A Petty, Howard R. %A L. M. Smith %A Fearon, Douglas T. %A McConnell, Harden M. %B Proceedings of the National Academy of Sciences of the United States of America %V 77 %P 6587-91 %@ 0027-8424 %G English %R 10.1073/pnas.77.11.6587 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1979 %T Antibodies bound to lipid haptens in model membranes diffuse as rapidly as the lipids themselves %A L. M. Smith %A Parce, J. Wallace %A Smith, Barton A. %A McConnell, Harden M. %B Proceedings of the National Academy of Sciences of the United States of America %V 76 %P 4177-9 %@ 0027-8424 %G English %R 10.1073/pnas.76.9.4177 %0 Journal Article %J Biochemistry %D 1979 %T Lateral diffusion of M-13 coat protein in model membranes %A L. M. Smith %A Smith, Barton A. %A McConnell, Harden M. %B Biochemistry %V 18 %P 2256-9 %@ 0006-2960 %G English %R 10.1021/bi00578a019