%0 Journal Article %J Journal of Biological Chemistry %D 2021 %T Fused in sarcoma regulates DNA replication timing and kinetics %A Jia, W. Y. %A Kim, S. H. %A Scalf, M. A. %A Tonzi, P. %A Millikin, R. J. %A Guns, W. M. %A Liu, L. %A Mastrocola, A. S. %A Smith, L. M. %A Huang, T. T. %A Tibbetts, R. S. %B Journal of Biological Chemistry %V 297 %8 Sep %G eng %M WOS:000706409400004 %] 101049 %R 10.1016/j.jbc.2021.101049 %0 Journal Article %J Nature methods %D 2019 %T Best practices and benchmarks for intact protein analysis for top-down mass spectrometry %A D.P Donnelly %A C.M Rawlins %A C.J DeHart %A L Fornelli %A L.F Schachner %A Z Lin %A J.L Lippens %A K.C Aluri %A R Sarin %A B Chen %A C Lantz %A W Jung %A K.R Johnson %A A Koller %A J.J Wolff %A I. DG Campuzano %A J.R Auclair %A A.R Ivanov %A J.P Whitelegge %A L Pasa-Tolic %A J Chamot-Rooke %A P.O Danis %A L.M Smith %A Y.O Tsybin %A J.A Loo %A Y Ge %A N.L Kelleher %A J.N Agar %B Nature methods %V 16 %G eng %N 7 %0 Journal Article %J Nature methods %D 2019 %T A five-level classification system for proteoform identifications %A L.M Smith %A P.M Thomas %A M.R Shortreed %A L.V Schaffer %A R.T Fellers %A R.D LeDuc %A T. Tucholski %A Y. Ge %A J.A Agar %A L.C Anderson %A J. Chamot-Rooke %A J. Gault %A J.A Loo %A L. Pasa-Tolic %A C.V Robinson %A H. Schluter %A Y.O Tsybin %A M. Bilaseca %A J.A Vizcaino %A P.O Danis %A N.L Kelleher %B Nature methods %V 16 %8 08/2019 %G eng %N 10 %& 939 %0 Journal Article %J Proteomics %D 2019 %T Identification and Quantification of Proteoforms by Mass Spectrometry %A L.V Schaffer %A R.J Millikin %A R.M Miller %A L.C Anderson %A R.T Fellers %A Y. Ge %A N.L Kelleher %A R.D LeDuc %A X. Liu %A S.H Payne %A L. Sun %A P.M Thomas %A T. Tucholski %A Z. Wang %A S. Wu %A Z. Wu %A D. Yu %A M.R Shortreed %A L.M Smith %B Proteomics %G eng %U https://scholar.google.com/scholar?hl=en&as_sdt=0%2C50&q=Identification+and+Quantification+of+Proteoforms+by+Mass+Spectrometry&btnG= %0 Journal Article %J Analytical Chemistry %D 2019 %T Intact-Mass Analysis Facilitating the Identification of Large Human Heart Proteoforms %A L.V Schaffer %A T. Tucholski %A M.R Shortreed %A Y. Ge %A L.M Smith %B Analytical Chemistry %V 91 %G eng %N 17 %0 Journal Article %J Journal of Biological Chemistry %D 2019 %T Proteomic analysis of affinity-purified 26S proteasomes identifies a suite of assembly chaperones in Arabidopsis %A Gemperline, D. C. %A Marshall, R. S. %A Lee, K. H. %A Zhao, Q. Z. %A Hu, W. M. %A McLoughlin, F. %A Scalf, M. %A Smith, L. M. %A Vierstra, R. D. %B Journal of Biological Chemistry %V 294 %P 17570-17592 %8 Nov %@ 0021-9258 %G eng %M WOS:000503173500032 %R 10.1074/jbc.RA119.010219 %0 Journal Article %J Journal of Visualized Experiments %D 2018 %T Adaptation of Hybridization Capture of Chromatin-associated Proteins for Proteomics to Mammalian Cells %A Hector Guillen-Ahlers %A P.K Rao %A D.S Perumalla %A M.J Montoya %A A.YL Jadhav %A M.R Shortreed %A L.M Smith %A Michael Olivier %B Journal of Visualized Experiments %G eng %N 136 %0 Journal Article %J Nature Chemical Biology %D 2018 %T How many human proteoforms are there? %A Aebersold, R. %A Agar, J. N. %A Amster, I. J. %A Baker, M. S. %A Bertozzi, C. R. %A Boja, E. S. %A Costello, C. E. %A Cravatt, B. F. %A Fenselau, C. %A Garcia, B. A. %A Ge, Y. %A Gunawardena, J. %A Hendrickson, R. C. %A Hergenrother, P. J. %A Huber, C. G. %A Ivanov, A. R. %A Jensen, O. N. %A Jewett, M. C. %A Kelleher, N. L. %A Kiessling, L. L. %A Krogan, N. J. %A Larsen, M. R. %A Loo, J. A. %A Loo, R. R. O. %A Lundberg, E. %A MacCoss, M. J. %A Mallick, P. %A Mootha, V. K. %A Mrksich, M. %A Muir, T. W. %A Patrie, S. M. %A Pesavento, J. J. %A Pitteri, S. J. %A Rodriguez, H. %A Saghatelian, A. %A Sandoval, W. %A Schluter, H. %A Sechi, S. %A Slavoff, S. A. %A Smith, L. M. %A Snyder, M. P. %A Thomas, P. M. %A Uhlen, M. %A Van Eyk, J. E. %A Vidal, M. %A Walt, D. R. %A White, F. M. %A Williams, E. R. %A Wohlschlager, T. %A Wysocki, V. H. %A Yates, N. A. %A Young, N. L. %A Zhang, B. %B Nature Chemical Biology %V 14 %P 206-214 %8 Mar %@ 1552-4450 %G eng %R 10.1038/nchembio.2576 %0 Journal Article %J Journal of Proteome Research %D 2018 %T ProForma: A Standard Proteoform Notation %A Leduc, R. D. %A Schwammle, V. %A Shortreed, M. R. %A Cesnik, A. J. %A Solntsev, S. K. %A Shaw, J. B. %A Martin, M. J. %A Vizcaino, J. A. %A Alpi, E. %A Danis, P. %A Kelleher, N. L. %A Smith, L. M. %A Ge, Y. %A Agar, J. N. %A Chamot-Rooke, J. %A Loo, J. A. %A Pasa-Tolic, L. %A Tsybin, Y. O. %B Journal of Proteome Research %V 17 %P 1321-1325 %8 Mar %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.7b00851 %0 Journal Article %J Journal of Proteome Research %D 2018 %T Proteoform Suite: Software for Constructing, Quantifying, and Visualizing Proteoform Families %A Cesnik, A. J. %A Shortreed, M. R. %A Schaffer, L. V. %A Knoener, R. A. %A Frey, B. L. %A Scalf, M. %A Solntsev, S. K. %A Dai, Y. X. %A Gasch, A. P. %A Smith, L. M. %B Journal of Proteome Research %V 17 %P 568-578 %8 Jan %@ 1535-3893 %G eng %R 10.1021/acs.jproteome.7b00685 %0 Journal Article %J Analytical Chemistry %D 2017 %T Multiplexed Sequence-Specific Capture of Chromatin and Mass Spectrometric Discovery of Associated Proteins %A Dai, Yunxiang %A Kennedy-Darling, Julia %A Shortreed, Michael R. %A Scalf, Mark %A Gasch, Audrey P. %A Smith, L. M. %B Analytical Chemistry %V 89 %P 7841-7846 %@ 0003-2700 %G eng %R 10.1021/acs.analchem.7b01784 %0 Journal Article %J Bmc Genomics %D 2017 %T Proteomics in non-human primates: utilizing RNA-Seq data to improve protein identification by mass spectrometry in vervet monkeys %A Proffitt, J. M. %A Glenn, J. %A Cesnik, A. J. %A Jadhav, A. %A Shortreed, M. R. %A Smith, L. M. %A Kavanagh, K. %A Cox, L. A. %A Olivier, M. %B Bmc Genomics %V 18 %8 Nov %@ 1471-2164 %G eng %] 877 %R 10.1186/s12864-017-4279-0 %0 Journal Article %J Genomics %D 2016 %T HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae %A Guillen-Ahlers, H. %A Rao, P. K. %A Levenstein, M. E. %A Kennedy-Darling, J. %A Perumalla, D. S. %A Jadhav, A. Y. %A Glenn, J. P. %A Ludwig-Kubinski, A. %A Drigalenko, E. %A Montoya, M. J. %A Goring, H. H. %A Anderson, C. D. %A Scalf, M. %A Gildersleeve, H. I. %A Cole, R. %A Greene, A. M. %A Oduro, A. K. %A Lazarova, K. %A Cesnik, A. J. %A Barfknecht, J. %A Cirillo, L. A. %A Gasch, A. P. %A Shortreed, M. R. %A Smith, L. M. %A Olivier, M. %B Genomics %V 107 %P 267-273 %G eng %0 Journal Article %J Proteomics %D 2016 %T Morpheus Spectral Counter: A computational tool for label-free quantitative mass spectrometry using the Morpheus search engine %A Gemperline, D. C. %A Scalf, M. %A Smith, L. M. %A Vierstra, R. D. %B Proteomics %V 16 %P 920-924 %G eng %9 Article %R 10.1002/pmic.201500420 %0 Journal Article %J Biomaterials %D 2016 %T Proteomic analysis of naturally-sourced biological scaffolds %A Li, Q. Y. %A Uygun, B. E. %A Geerts, S. %A Ozer, S. %A Scalf, M. %A Gilpin, S. E. %A Ott, H. C. %A Yarmush, M. L. %A L. M. Smith %A Welham, N. V. %A Frey, B. L. %B Biomaterials %V 75 %P 37-46 %8 Jan %@ 0142-9612 %G eng %] Ber s, 1995, journal of cell biology, v131, p1083 %R 10.1016/j.biomaterials.2015.10.011 %0 Journal Article %J Science Translational Medicine %D 2015 %T Bioengineered vocal fold mucosa for voice restoration %A Ling, C. Y. %A Li, Q. Y. %A Brown, M. E. %A Kishimoto, Y. %A Toya, Y. %A Devine, E. E. %A Choi, K. O. %A Nishimoto, K. %A Norman, I. G. %A Tsegyal, T. %A Jiang, J. J. %A Burlingham, W. J. %A Gunasekaran, S. %A L. M. Smith %A Frey, B. L. %A Welham, N. V. %B Science Translational Medicine %V 7 %8 Nov %@ 1946-6234 %G eng %] 314ra187 %R 10.1126/scitranslmed.aab4014 %0 Journal Article %J Physiological Genomics %D 2014 %T Advanced methods for the analysis of chromatin-associated proteins %A Guillen-Ahlers, H. %A Shortreed, M. R. %A L. M. Smith %A Olivier, M. %B Physiological Genomics %V 46 %P 441-447 %8 Jul %@ 1094-8341 %G eng %2 PMC4080278 %R 10.1152/physiolgenomics.00041.2014 %0 Journal Article %J Journal of Proteome Research %D 2014 %T Discovery of Chromatin-Associated Proteins via Sequence-Specific Capture and Mass Spectrometric Protein Identification in Saccharomyces cerevisiae %A Kennedy-Darling, J. %A Guillen-Ahlers, H. %A Shortreed, M. R. %A Scalf, M. %A Frey, B. L. %A Kendziorski, C. %A Olivier, M. %A Gasch, A. P. %A L. M. Smith %B Journal of Proteome Research %V 13 %P 3810-3825 %8 Aug %@ 1535-3893 %G eng %2 PMC4123949 %R 10.1021/pr5004938 %0 Journal Article %J Journal of Proteome Research %D 2014 %T Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework %A Jagtap, P. D. %A Johnson, J. E. %A Onsongo, G. %A Sadler, F. W. %A Murray, K. %A Wang, Y. B. %A Shenykrnan, G. M. %A Bandhakavi, S. %A L. M. Smith %A Griffin, T. J. %B Journal of Proteome Research %V 13 %P 5898-5908 %8 Dec %@ 1535-3893 %G English %9 Article %R 10.1021/pr500812t %0 Journal Article %J Analytical Chemistry %D 2014 %T Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics %A Rhoads, T. W. %A Rose, C. M. %A Bailey, D. J. %A Riley, N. M. %A Molden, R. C. %A Nestler, A. J. %A Merrill, A. E. %A L. M. Smith %A Hebert, A. S. %A Westphall, M. S. %A Pagliarini, D. J. %A Garcia, B. A. %A Coon, J. J. %B Analytical Chemistry %V 86 %P 2314-2319 %8 Mar %@ 0003-2700 %G English %9 Article %R 10.1021/ac403579s %0 Journal Article %J Nature Methods %D 2013 %T Proteoform: a single term describing protein complexity %A L. M. Smith %A Kelleher, N. L. %A Ge, Y. %A Consortium Top Down, Proteomics %B Nature Methods %V 10 %P 186-187 %8 Mar %@ 1548-7091 %G eng %R 10.1038/nmeth.2369 %0 Book Section %D 2011 %T Complete Chemical Modification of Amine and Acid Functional Groups of Peptides and Small Proteins %A Krusemark, Casey J. %A Frey, Brian L. %A L. M. Smith %A Belshaw, Peter J. %E Gevaert, K. %E Vandekerckhove, J. %S Methods in Molecular Biology %V 753 %P 77-91 %@ 1064-3745
978-1-61779-147-5 %G eng %R 10.1007/978-1-61779-148-2_6 %0 Journal Article %J Environmental Science & Technology %D 2011 %T Hydroxycarboxylic Acid-Derived Organosulfates: Synthesis, Stability, and Quantification in Ambient Aerosol %A Olson, Corey N. %A Galloway, Melissa M. %A Yu, Ge %A Hedman, Curtis J. %A Lockett, Matthew R. %A Yoon, T. P. %A Stone, Elizabeth A. %A L. M. Smith %A Keutsch, F. N. %B Environmental Science & Technology %V 45 %P 6468-6474 %8 Aug %G eng %R 10.1021/es201039p %F ISI 2011 08 10 %0 Journal Article %J Molecular Cell %D 2011 %T Sirt3 Promotes the Urea Cycle and Fatty Acid Oxidation during Dietary Restriction %A Hallows, William C. %A Yu, Wei %A Smith, Brian C. %A Devires, Mark K. %A Ellinger, James J. %A Someya, Shinichi %A Shortreed, Michael R. %A Prolla, Tomas %A Markley, John L. %A L. M. Smith %A Zhao, Shimin %A Guan, Kun-Liang %A Denu, John M. %B Molecular Cell %V 41 %P 139-149 %8 Jan %G eng %2 PMC3101115 %R 10.1016/j.molcel.2011.01.002 %F ISI 2011 03 18 %0 Journal Article %J Journal of Biological Chemistry %D 2010 %T Affinity Purification of the Arabidopsis 26 S Proteasome Reveals a Diverse Array of Plant Proteolytic Complexes %A Book, Adam J. %A Gladman, Nicholas P. %A Lee, Sang-Sook %A Scalf, Mark %A L. M. Smith %A Vierstra, Richard D. %B Journal of Biological Chemistry %V 285 %P 25554-25569 %8 Aug %G eng %2 PMC2919120 %R 10.1074/jbc.M110.136622 %F ISI 2010 12 31 %0 Journal Article %J Journal of Combinatorial Chemistry %D 2008 %T Exploration of structure - Activity relationships among foldamer ligands for a specific protein binding site via parallel and split-and-mix library synthesis %A Murray, Justin K. %A Sadowsky, Jack D. %A Scalf, Mark %A L. M. Smith %A Tomita, York %A Gellman, S. H. %B Journal of Combinatorial Chemistry %V 10 %P 204-215 %8 Mar-Apr %G eng %R 10.1021/cc700153z %F ISI 2008 03 28 %0 Journal Article %J Analytical Chemistry %D 2008 %T Identification of Cell Surface Markers to Differentiate Rat Endothelial and Fibroblast Cells Using Lectin Arrays and LC-ESI-MS/MS %A Lee, J. E. %A Mirza, S. P. %A Didier, D. N. %A Scalf, M. %A Olivier, M. %A Greene, A. S. %A L. M. Smith %B Analytical Chemistry %V 80 %P 8269-8275 %8 Nov %G eng %2 PMC2950091 %R 10.1021/ac801390b %F ISI 2008 11 27 %0 Journal Article %J Endothelium-Journal of Endothelial Cell Research %D 2008 %T Revealing the role of phosphatidylserine in shear stress-mediated protection in endothelial cells %A Freed, Julie K. %A Shortreed, Michael R. %A Kleefisch, Christopher J. %A L. M. Smith %A Greene, Andrew S. %B Endothelium-Journal of Endothelial Cell Research %V 15 %P 225-230 %G eng %2 PMC2579788 %R 10.1080/10623320802228849 %F ISI 2008 08 15 %0 Journal Article %J Analytical Biochemistry %D 2007 %T Characterization of vascular endothelial growth factor receptors on the endothelial cell surface during hypoxia using whole cell binding arrays %A Lee, Ji Eun %A Didier, Damela N. %A Lockett, Matthew R. %A Scalf, Mark %A Greene, Andrew S. %A Olivier, Michael %A L. M. Smith %B Analytical Biochemistry %V 369 %P 241-247 %8 Oct %G eng %2 PMC2706495 %R 10.1016/j.ab.2007.06.010 %F ISI 2007 10 19 %0 Journal Article %J American Journal of Physiology - Endocrinology & Metabolism %D 2005 %T alpha-Ketoisocaproate-induced hypersecretion of insulin by islets from diabetes-susceptible mice %A Rabaglia, M. E. %A Gray-Keller, M. P. %A Frey, B. L. %A Shortreed, M. R. %A L. M. Smith %A Attie, A. D. %B American Journal of Physiology - Endocrinology & Metabolism %V 289 %P E218-E224 %8 Aug %G eng %R 10.1152/ajpendo.00573.2004 %F ISI 2005 week 32 %0 Journal Article %J Journal of the American Chemical Society %D 2005 %T Efficient synthesis of a beta-peptide combinatorial library with microwave irradiation %A Murray, J. K. %A Farooqi, B. %A Sadowsky, J. D. %A Scalf, M. %A Freund, W. A. %A L. M. Smith %A Chen, J. D. %A Gellman, S. H. %B Journal of the American Chemical Society %V 127 %P 13271-13280 %8 Sep 28 %G eng %R 10.1021/ja052733v %F ISI 2005 week 43 %0 Journal Article %J Nature Materials %D 2002 %T DNA-modified nanocrystalline diamond thin-films as stable, biologically active substrates %A Yang, W. S. %A Auciello, O. %A Butler, J. E. %A Cai, W. %A Carlisle, J. A. %A Gerbi, J. %A Gruen, D. M. %A Knickerbocker, T. %A Lasseter, T. L. %A Russell, J. N. %A L. M. Smith %A Hamers, R. J. %B Nature Materials %V 1 %P 253-257 %8 Dec %G eng %R 10.1038/nmat779 %F ISI 2003 week 15 %0 Journal Article %J Materials Research Society Symposium Proceedings %D 2002 %T Preparation and electrochemical characterization of DNA-modified nanocrystalline diamond films %A Yang, Wensha %A Auciello, Orlando %A Butler, James E. %A Cai, Wei %A Carlisle, John A. %A Gerbi, Jennifer E. %A Gruen, Dieter M. %A Knickerbocker, Tanya %A Lasseter, Tami L. %A Russell, John N., Jr. %A L. M. Smith %A Hamers, R. J. %B Materials Research Society Symposium Proceedings %V 737 %@ 0272-9172 %G English %R 10.1557/PROC-737-F4.4 %0 Journal Article %J Analytical Chemistry %D 2000 %T Genetic identification by mass spectrometric analysis of single-nucleotide polymorphisms: Ternary encoding of genotypes %A Griffin, T. J. %A L. M. Smith %B Analytical Chemistry %V 72 %P 3298-3302 %8 Jul %@ 0003-2700 %G eng %R 10.1021/ac991390e %0 Journal Article %J Langmuir %D 2000 %T Hydrophilic/hydrophobic patterned surfaces as templates for DNA arrays %A Gillmor, S. D. %A Thiel, A. J. %A Strother, T. C. %A L. M. Smith %A Lagally, M. G. %B Langmuir %V 16 %P 7223-7228 %8 Sep %@ 0743-7463 %G eng %R 10.1021/la991026a %0 Journal Article %J Trends in Biotechnology %D 2000 %T Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry %A Griffin, T. J. %A L. M. Smith %B Trends in Biotechnology %V 18 %P 77-84 %8 Feb %@ 0167-7799 %G eng %R 10.1016/s0167-7799(99)01401-8 %0 Journal Article %J Proceedings of the National Academy of Sciences of the United States of America %D 1999 %T Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry %A Griffin, Timothy J. %A Hall, Jeff G. %A Prudent, James R. %A L. M. Smith %B Proceedings of the National Academy of Sciences of the United States of America %V 96 %P 6301-6306 %@ 0027-8424 %G English %2 PMC26876 %R 10.1073/pnas.96.11.6301 %0 Book Section %D 1999 %T MALDI-TOF mass spectrometric detection of PNA hybrids for genetic analysis %A Griffin, Timothy J. %A Tang, Wei %A L. M. Smith %E Nielsen, P. E. %E Egholm, M. %7 1 %I Horizon Scientific Press %P 143-154 %@ 1-898486-16-6 %G English %& 3.5 %0 Journal Article %J Biosystems %D 1999 %T Progress toward demonstration of a surface based DNA computation: a one word approach to solve a model satisfiability problem %A Liu, Q. %A Frutos, A. G. %A Wang, L. %A Thiel, A. J. %A Gillmor, S. D. %A Strother, C. T. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %B Biosystems %V 52 %P 25-33 %@ 0303-2647 %G English %R 10.1016/s0303-2647(99)00029-5 %0 Conference Paper %D 1999 %T A surface-based approach to DNA computation %A Liu, Q. %A Guo, Z. %A Fei, Z. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %E Landweber, L. F. %E Baum, E. B. %I American Math. Soc %C Princeton, NJ %P 123-132 %8 1999 %G eng %0 Journal Article %J Biosystems %D 1999 %T Surface-based DNA computing operations: DESTROY and READOUT %A Wang, L. %A Liu, Q. %A Frutos, A. G. %A Gillmor, S. D. %A Thiel, A. J. %A Strother, T. C. %A Condon, A. E. %A Corn, R. M. %A Lagally, M. G. %A L. M. Smith %B Biosystems %V 52 %P 189-191 %@ 0303-2647 %G English %R 10.1016/s0303-2647(99)00046-5 %0 Journal Article %J Analytical Biochemistry %D 1998 %T An approach to predicting the stabilities of peptide nucleic acid : DNA duplexes %A Griffin, T. J. %A L. M. Smith %B Analytical Biochemistry %V 260 %P 56-63 %8 Jun %@ 0003-2697 %G eng %R 10.1006/abio.1998.2686 %0 Journal Article %J Genome Research %D 1998 %T A software system for data analysis in automated DNA sequencing %A Giddings, M. C. %A Severin, J. %A Westphall, M. %A Wu, J. Z. %A L. M. Smith %B Genome Research %V 8 %P 644-665 %8 Jun %@ 1054-9803 %G eng %2 PMC310740 %R 10.1101/gr.8.6.644 %0 Journal Article %J Physical Review B %D 1998 %T Time-dependent heterointerfacial band bending and quasi-two-dimensionl excitonic transport in GaAs structures %A Gilliland, G. D. %A Petrovic, M. S. %A Hjalmarson, H. P. %A Wolford, D. J. %A Northrop, G. A. %A Kuech, T. F. %A Smith, L. M. %A Bradley, J. A. %B Physical Review B %V 58 %P 4728-4732 %8 Aug %G eng %R 10.1103/PhysRevB.58.4728 %0 Journal Article %J Nature Biotechnology %D 1997 %T Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization %A Guo, Z. %A Liu, Q. H. %A L. M. Smith %B Nature Biotechnology %V 15 %P 331-335 %8 Apr %@ 1087-0156 %G eng %R 10.1038/nbt0497-331 %0 Journal Article %J Nature Biotechnology %D 1997 %T Genetic analysis by peptide nucleic acid affinity MALDI-TOF mass spectrometry %A Griffin, T. J. %A Tang, W. %A L. M. Smith %B Nature Biotechnology %V 15 %P 1368-1372 %8 Dec %@ 1087-0156 %G eng %R 10.1038/nbt1297-1368 %0 Journal Article %J Nucleic Acids Research %D 1997 %T Ligation-mediated PCR amplification of specific fragments from a Class-II restriction endonuclease %A Guilfoyle, Richard A. %A Leeck, Charles L. %A Kroening, K. Dubear %A L. M. Smith %A Guo, Zhen %B Nucleic Acids Research %V 25 %P 1854-1858 %@ 0305-1048 %G English %2 PMC146646 %R 10.1093/nar/25.9.1854 %0 Journal Article %J Electrophoresis %D 1996 %T Automatic matrix determination in four dye fluorescence-based DNA sequencing %A Yin, Z. B. %A Severin, J. %A Giddings, M. C. %A Huang, W. A. %A Westphall, M. S. %A L. M. Smith %B Electrophoresis %V 17 %P 1143-1150 %8 Jun %@ 0173-0835 %G eng %R 10.1002/elps.1150170626 %0 Journal Article %J Biochemica %D 1996 %T The Cleavase Fragment Length Polymorphism (CFLP) assay %A Brow, M. A. D. %A Oldenburg, M. C. %A Lyamichev, V. %A Heisler, L. M. %A Grotelueschen, J. %A Lyamicheva, N. %A Kozyavkin, S. %A Fors, L. %A Dahlberg, J. E. %A L. M. Smith %A Olive, D. M. %B Biochemica %V 1 %P 14-15 %G eng %0 Journal Article %J Methods in Enzymology %D 1996 %T High-speed automated DNA sequencing in ultrathin slab gels %A L. M. Smith %A Brumley, Robert L., Jr. %A Buxton, Eric C. %A Giddings, Michael %A Marchbanks, Michael %A Tong, Xinchun %B Methods in Enzymology %V 271 %P 219-237 %@ 0076-6879 %G English %R 10.1016/S0076-6879(96)71012-1 %0 Journal Article %J Gene %D 1996 %T M13-102: A vector for facilitating construction and improving quality of M13 shotgun libraries %A Chen, D. H. %A Johnson, A. F. %A Severin, J. M. %A Rank, D. R. %A L. M. Smith %A Guilfoyle, R. A. %B Gene %V 172 %P 53-57 %8 Jun %@ 0378-1119 %G eng %R 10.1016/0378-1119(96)00048-0 %0 Journal Article %J Focus %D 1996 %T Mutation detection by cleavase fragment length polymorphism %A Brow, M. A. D. %A Oldenburg, M. C. %A Lyamichev, V. %A Heisler, L. M. %A Grotelueschen, J. %A Lyamicheva, N. %A Kozyavkin, S. %A Fors, L., %A Dahlberg, J. %A L. M. Smith %A Olive, D. M. %B Focus %V 18 %P 2-5 %G eng %0 Journal Article %J Analytical Biochemistry %D 1996 %T Purification of single-stranded M13 DNA by cooperative triple-helix-mediated affinity capture %A Johnson, A. F. %A Wang, R. F. %A Ji, H. M. %A Chen, D. H. %A Guilfoyle, R. A. %A L. M. Smith %B Analytical Biochemistry %V 234 %P 83-95 %8 Feb %@ 0003-2697 %G eng %R 10.1006/abio.1996.0053 %0 Journal Article %J Genomics %D 1996 %T Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture %A Ji, H. M. %A Francisco, T. %A L. M. Smith %A Guilfoyle, R. A. %B Genomics %V 31 %P 185-192 %8 Jan %@ 0888-7543 %G eng %R 10.1006/geno.1996.0030 %0 Journal Article %J Analytical Chemistry %D 1995 %T Side Excitation of Fluorescence in Ultrathin Slab Gel Electrophoresis %A Chen, D. H. %A Peterson, M. D. %A Brumley, R. L. %A Giddings, M. C. %A Buxton, E. C. %A Westphall, M. %A L. M. Smith %B Analytical Chemistry %V 67 %P 3405-3411 %8 Oct %@ 0003-2700 %G eng %R 10.1021/ac00115a007 %0 Journal Article %J Nucleic Acids Research %D 1994 %T Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports %A Guo, Zhen %A Guilfoyle, Richard A. %A Thiel, Andrew J. %A Wang, Renfeng %A L. M. Smith %B Nucleic Acids Research %V 22 %P 5456-65 %@ 0305-1048 %G English %2 PMC332096 %R 10.1093/nar/22.24.5456 %0 Journal Article %J Nucleic Acids Research %D 1994 %T A direct selection strategy for shotgun cloning and sequencing in the bacteriophage M13 %A Guilfoyle, Richard A. %A L. M. Smith %B Nucleic Acids Research %V 22 %P 100-7 %@ 0305-1048 %G English %2 PMC307752 %R 10.1093/nar/22.1.100 %0 Journal Article %J Proceedings - Electrochemical Society %D 1994 %T Fabrication of microstructures for use in biological and optical applications %A Denton, D. D. %A Thiel, A. J. %A L. M. Smith %A Bajikar, S. %A White, V. %A Ghodssi, R. %A Fish, G. %A McCaughan, L. %B Proceedings - Electrochemical Society %V 94-14 %P 103-14 %@ 0161-6374 %G English %0 Journal Article %J DNA Sequence %D 1994 %T A high throughput system for the preparation of single stranded templates grown in microculture %A Kolner, Douglas E. %A Guilfoyle, Richard A. %A L. M. Smith %B DNA Sequence %V 4 %P 253-7 %@ 1042-5179 %G English %0 Journal Article %J Genetic Analysis, Techniques and Applications %D 1994 %T Rapid isolation of cosmid insert DNA by triple-helix-mediated affinity capture %A Ji, Huamin %A L. M. Smith %A Guilfoyle, Richard A. %B Genetic Analysis, Techniques and Applications %V 11 %P 43-7 %@ 1050-3862 %G English %R 10.1016/1050-3862(94)90060-4 %0 Journal Article %J JAMA %D 1994 %T Statement on use of DNA testing for presymptomatic identification of cancer risk %A Collins, F. S. %A Benjamin, L. J. %A Botstein, D. %A Cox, J. R. %A Davidson, N. %A Gray, J. W. %A Holtzman, N. %A Housman, D. E. %A Jamison, K. R. %A Nelkin, D. %A Rothstein, R. %A Smith, D. C. %A L. M. Smith %A Spence, M. A. %A Tilghman, S. M. %B JAMA %V 271 %P 785-785 %8 Mar %@ 0098-7484 %G eng %R 10.1001/jama.1994.03510340075038 %0 Journal Article %J Nucleic Acids Research %D 1993 %T An adaptive, object oriented strategy for base calling in DNA sequence analysis %A Giddings, Michael C. %A Brumley, Robert L., Jr. %A Haker, Michael %A L. M. Smith %B Nucleic Acids Research %V 21 %P 4530-40 %@ 0305-1048 %G English %2 PMC311186 %R 10.1093/nar/21.19.4530 %0 Journal Article %J Journal of Vacuum Science & Technology B %D 1991 %T INTRINSIC RECOMBINATION AND INTERFACE CHARACTERIZATION IN SURFACE-FREE GAAS STRUCTURES %A Wolford, D. J. %A Gilliland, G. D. %A Kuech, T. F. %A Smith, L. M. %A Martinsen, J. %A Bradley, J. A. %A Tsang, C. F. %A Venkatasubramanian, R. %A Ghandi, S. K. %A Hjalmarson, H. P. %B Journal of Vacuum Science & Technology B %V 9 %P 2369-2376 %8 Jul-Aug %@ 1071-1023 %G eng %M WOS:A1991GB89700080 %R 10.1116/1.585705